co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09645

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
2	GO:0010055: atrichoblast differentiation	0.00E+00
3	GO:1902001: fatty acid transmembrane transport	0.00E+00
4	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
5	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
6	GO:0018063: cytochrome c-heme linkage	0.00E+00
7	GO:0009636: response to toxic substance	2.85E-06
8	GO:0010112: regulation of systemic acquired resistance	3.45E-06
9	GO:1900057: positive regulation of leaf senescence	9.14E-05
10	GO:1900384: regulation of flavonol biosynthetic process	1.60E-04
11	GO:1990542: mitochondrial transmembrane transport	1.60E-04
12	GO:0032107: regulation of response to nutrient levels	1.60E-04
13	GO:1902600: hydrogen ion transmembrane transport	1.60E-04
14	GO:0080173: male-female gamete recognition during double fertilization	1.60E-04
15	GO:0009700: indole phytoalexin biosynthetic process	1.60E-04
16	GO:0010230: alternative respiration	1.60E-04
17	GO:0010482: regulation of epidermal cell division	1.60E-04
18	GO:0009407: toxin catabolic process	3.18E-04
19	GO:0019725: cellular homeostasis	3.65E-04
20	GO:0071668: plant-type cell wall assembly	3.65E-04
21	GO:0055088: lipid homeostasis	3.65E-04
22	GO:0050684: regulation of mRNA processing	3.65E-04
23	GO:0019521: D-gluconate metabolic process	3.65E-04
24	GO:0015908: fatty acid transport	3.65E-04
25	GO:0000719: photoreactive repair	3.65E-04
26	GO:0010186: positive regulation of cellular defense response	5.97E-04
27	GO:0010366: negative regulation of ethylene biosynthetic process	5.97E-04
28	GO:0002230: positive regulation of defense response to virus by host	5.97E-04
29	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	5.97E-04
30	GO:0080163: regulation of protein serine/threonine phosphatase activity	5.97E-04
31	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	5.97E-04
32	GO:0032784: regulation of DNA-templated transcription, elongation	5.97E-04
33	GO:1902290: positive regulation of defense response to oomycetes	8.53E-04
34	GO:0001676: long-chain fatty acid metabolic process	8.53E-04
35	GO:0006020: inositol metabolic process	8.53E-04
36	GO:0070301: cellular response to hydrogen peroxide	8.53E-04
37	GO:0006012: galactose metabolic process	8.67E-04
38	GO:0042742: defense response to bacterium	8.68E-04
39	GO:0060548: negative regulation of cell death	1.13E-03
40	GO:0048830: adventitious root development	1.13E-03
41	GO:0006621: protein retention in ER lumen	1.13E-03
42	GO:0051567: histone H3-K9 methylation	1.13E-03
43	GO:1901002: positive regulation of response to salt stress	1.13E-03
44	GO:0006952: defense response	1.13E-03
45	GO:0006623: protein targeting to vacuole	1.35E-03
46	GO:0046283: anthocyanin-containing compound metabolic process	1.43E-03
47	GO:0031365: N-terminal protein amino acid modification	1.43E-03
48	GO:0016094: polyprenol biosynthetic process	1.43E-03
49	GO:0009164: nucleoside catabolic process	1.43E-03
50	GO:0002238: response to molecule of fungal origin	1.76E-03
51	GO:0009759: indole glucosinolate biosynthetic process	1.76E-03
52	GO:0010256: endomembrane system organization	1.76E-03
53	GO:0051607: defense response to virus	1.95E-03
54	GO:0009627: systemic acquired resistance	2.30E-03
55	GO:0050832: defense response to fungus	2.36E-03
56	GO:1900056: negative regulation of leaf senescence	2.48E-03
57	GO:0080186: developmental vegetative growth	2.48E-03
58	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.48E-03
59	GO:0043068: positive regulation of programmed cell death	2.88E-03
60	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.88E-03
61	GO:0030091: protein repair	2.88E-03
62	GO:0009617: response to bacterium	2.96E-03
63	GO:0006997: nucleus organization	3.29E-03
64	GO:0010204: defense response signaling pathway, resistance gene-independent	3.29E-03
65	GO:0017004: cytochrome complex assembly	3.29E-03
66	GO:0010208: pollen wall assembly	3.29E-03
67	GO:0010120: camalexin biosynthetic process	3.29E-03
68	GO:0006098: pentose-phosphate shunt	3.72E-03
69	GO:0051865: protein autoubiquitination	3.72E-03
70	GO:1900426: positive regulation of defense response to bacterium	4.17E-03
71	GO:0090332: stomatal closure	4.17E-03
72	GO:0051707: response to other organism	4.37E-03
73	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.64E-03
74	GO:0009641: shade avoidance	4.64E-03
75	GO:0015031: protein transport	5.11E-03
76	GO:0048765: root hair cell differentiation	5.12E-03
77	GO:0009684: indoleacetic acid biosynthetic process	5.12E-03
78	GO:0009682: induced systemic resistance	5.12E-03
79	GO:0052544: defense response by callose deposition in cell wall	5.12E-03
80	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.62E-03
81	GO:0012501: programmed cell death	5.62E-03
82	GO:2000028: regulation of photoperiodism, flowering	6.14E-03
83	GO:0002237: response to molecule of bacterial origin	6.67E-03
84	GO:0009225: nucleotide-sugar metabolic process	7.22E-03
85	GO:0042343: indole glucosinolate metabolic process	7.22E-03
86	GO:0000162: tryptophan biosynthetic process	7.79E-03
87	GO:0080147: root hair cell development	8.38E-03
88	GO:0006629: lipid metabolic process	8.87E-03
89	GO:0051302: regulation of cell division	8.97E-03
90	GO:0010026: trichome differentiation	8.97E-03
91	GO:0043622: cortical microtubule organization	8.97E-03
92	GO:0009651: response to salt stress	9.36E-03
93	GO:0098542: defense response to other organism	9.59E-03
94	GO:0009269: response to desiccation	9.59E-03
95	GO:0071456: cellular response to hypoxia	1.02E-02
96	GO:0009411: response to UV	1.09E-02
97	GO:0009625: response to insect	1.09E-02
98	GO:0042147: retrograde transport, endosome to Golgi	1.22E-02
99	GO:0006979: response to oxidative stress	1.27E-02
100	GO:0042391: regulation of membrane potential	1.29E-02
101	GO:0048868: pollen tube development	1.36E-02
102	GO:0006520: cellular amino acid metabolic process	1.36E-02
103	GO:0010150: leaf senescence	1.45E-02
104	GO:0006891: intra-Golgi vesicle-mediated transport	1.58E-02
105	GO:0010193: response to ozone	1.58E-02
106	GO:0000302: response to reactive oxygen species	1.58E-02
107	GO:0055114: oxidation-reduction process	1.82E-02
108	GO:0071805: potassium ion transmembrane transport	1.89E-02
109	GO:0009615: response to virus	2.05E-02
110	GO:0006888: ER to Golgi vesicle-mediated transport	2.30E-02
111	GO:0009817: defense response to fungus, incompatible interaction	2.47E-02
112	GO:0010311: lateral root formation	2.56E-02
113	GO:0007568: aging	2.74E-02
114	GO:0048527: lateral root development	2.74E-02
115	GO:0010200: response to chitin	2.89E-02
116	GO:0009853: photorespiration	2.93E-02
117	GO:0006631: fatty acid metabolic process	3.31E-02
118	GO:0042542: response to hydrogen peroxide	3.41E-02
119	GO:0006886: intracellular protein transport	3.44E-02
120	GO:0010114: response to red light	3.51E-02
121	GO:0042546: cell wall biogenesis	3.61E-02
122	GO:0007165: signal transduction	3.73E-02
123	GO:0009965: leaf morphogenesis	3.81E-02
124	GO:0009737: response to abscisic acid	3.85E-02
125	GO:0031347: regulation of defense response	4.02E-02
126	GO:0009751: response to salicylic acid	4.05E-02
127	GO:0009414: response to water deprivation	4.29E-02
128	GO:0009736: cytokinin-activated signaling pathway	4.34E-02
129	GO:0006486: protein glycosylation	4.34E-02
130	GO:0006813: potassium ion transport	4.34E-02
131	GO:0009753: response to jasmonic acid	4.40E-02
132	GO:0008152: metabolic process	4.52E-02
133	GO:0009909: regulation of flower development	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0004033: aldo-keto reductase (NADP) activity	1.18E-04
4	GO:0047940: glucuronokinase activity	1.60E-04
5	GO:2001147: camalexin binding	1.60E-04
6	GO:0015245: fatty acid transporter activity	1.60E-04
7	GO:0090353: polygalacturonase inhibitor activity	1.60E-04
8	GO:0016229: steroid dehydrogenase activity	1.60E-04
9	GO:2001227: quercitrin binding	1.60E-04
10	GO:0070401: NADP+ binding	1.60E-04
11	GO:0004806: triglyceride lipase activity	2.43E-04
12	GO:0050736: O-malonyltransferase activity	3.65E-04
13	GO:0004364: glutathione transferase activity	5.03E-04
14	GO:0032403: protein complex binding	5.97E-04
15	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	5.97E-04
16	GO:0043169: cation binding	5.97E-04
17	GO:0022890: inorganic cation transmembrane transporter activity	8.53E-04
18	GO:0010178: IAA-amino acid conjugate hydrolase activity	8.53E-04
19	GO:0017077: oxidative phosphorylation uncoupler activity	8.53E-04
20	GO:0008106: alcohol dehydrogenase (NADP+) activity	8.53E-04
21	GO:0009916: alternative oxidase activity	1.13E-03
22	GO:0046923: ER retention sequence binding	1.13E-03
23	GO:0050378: UDP-glucuronate 4-epimerase activity	1.13E-03
24	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.43E-03
25	GO:0002094: polyprenyltransferase activity	1.43E-03
26	GO:0004656: procollagen-proline 4-dioxygenase activity	2.11E-03
27	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.11E-03
28	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.11E-03
29	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.11E-03
30	GO:0102391: decanoate--CoA ligase activity	2.11E-03
31	GO:0003978: UDP-glucose 4-epimerase activity	2.11E-03
32	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.11E-03
33	GO:0008320: protein transmembrane transporter activity	2.48E-03
34	GO:0043295: glutathione binding	2.48E-03
35	GO:0004467: long-chain fatty acid-CoA ligase activity	2.48E-03
36	GO:0008235: metalloexopeptidase activity	2.48E-03
37	GO:0004034: aldose 1-epimerase activity	2.88E-03
38	GO:0005544: calcium-dependent phospholipid binding	2.88E-03
39	GO:0071949: FAD binding	3.72E-03
40	GO:0004864: protein phosphatase inhibitor activity	4.64E-03
41	GO:0004177: aminopeptidase activity	5.12E-03
42	GO:0015386: potassium:proton antiporter activity	5.12E-03
43	GO:0004497: monooxygenase activity	5.41E-03
44	GO:0008266: poly(U) RNA binding	6.67E-03
45	GO:0030552: cAMP binding	7.22E-03
46	GO:0030553: cGMP binding	7.22E-03
47	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	7.49E-03
48	GO:0001046: core promoter sequence-specific DNA binding	8.38E-03
49	GO:0005216: ion channel activity	8.97E-03
50	GO:0015079: potassium ion transmembrane transporter activity	8.97E-03
51	GO:0005509: calcium ion binding	1.11E-02
52	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.15E-02
53	GO:0016787: hydrolase activity	1.27E-02
54	GO:0005249: voltage-gated potassium channel activity	1.29E-02
55	GO:0030551: cyclic nucleotide binding	1.29E-02
56	GO:0016853: isomerase activity	1.43E-02
57	GO:0015299: solute:proton antiporter activity	1.43E-02
58	GO:0050662: coenzyme binding	1.43E-02
59	GO:0004872: receptor activity	1.50E-02
60	GO:0016791: phosphatase activity	1.81E-02
61	GO:0016301: kinase activity	1.84E-02
62	GO:0008483: transaminase activity	1.89E-02
63	GO:0008237: metallopeptidase activity	1.89E-02
64	GO:0004683: calmodulin-dependent protein kinase activity	2.30E-02
65	GO:0030247: polysaccharide binding	2.30E-02
66	GO:0004721: phosphoprotein phosphatase activity	2.30E-02
67	GO:0020037: heme binding	2.48E-02
68	GO:0004222: metalloendopeptidase activity	2.65E-02
69	GO:0030145: manganese ion binding	2.74E-02
70	GO:0050897: cobalt ion binding	2.74E-02
71	GO:0019825: oxygen binding	2.86E-02
72	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.93E-02
73	GO:0005516: calmodulin binding	3.07E-02
74	GO:0050661: NADP binding	3.21E-02
75	GO:0004871: signal transducer activity	3.50E-02
76	GO:0005198: structural molecule activity	3.81E-02
77	GO:0003924: GTPase activity	4.11E-02
78	GO:0005506: iron ion binding	4.33E-02
79	GO:0016298: lipase activity	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005794: Golgi apparatus	8.46E-05
3	GO:0005802: trans-Golgi network	5.45E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.97E-04
5	GO:0031965: nuclear membrane	1.35E-03
6	GO:0000813: ESCRT I complex	1.43E-03
7	GO:0000164: protein phosphatase type 1 complex	1.43E-03
8	GO:0005768: endosome	2.79E-03
9	GO:0005829: cytosol	3.68E-03
10	GO:0017119: Golgi transport complex	4.64E-03
11	GO:0031012: extracellular matrix	6.14E-03
12	GO:0005743: mitochondrial inner membrane	8.09E-03
13	GO:0070469: respiratory chain	8.97E-03
14	GO:0005886: plasma membrane	1.40E-02
15	GO:0009705: plant-type vacuole membrane	1.45E-02
16	GO:0019898: extrinsic component of membrane	1.50E-02
17	GO:0009504: cell plate	1.50E-02
18	GO:0009505: plant-type cell wall	1.76E-02
19	GO:0032580: Golgi cisterna membrane	1.81E-02
20	GO:0005788: endoplasmic reticulum lumen	2.13E-02
21	GO:0016021: integral component of membrane	2.34E-02
22	GO:0005789: endoplasmic reticulum membrane	2.37E-02
23	GO:0031225: anchored component of membrane	3.20E-02
24	GO:0005635: nuclear envelope	4.55E-02