co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900037: regulation of cellular response to hypoxia	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0000819: sister chromatid segregation	0.00E+00
4	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
5	GO:0046506: sulfolipid biosynthetic process	1.54E-04
6	GO:0051641: cellular localization	1.54E-04
7	GO:0045786: negative regulation of cell cycle	1.54E-04
8	GO:0034214: protein hexamerization	1.54E-04
9	GO:0061062: regulation of nematode larval development	3.51E-04
10	GO:0009887: animal organ morphogenesis	4.15E-04
11	GO:0006351: transcription, DNA-templated	5.27E-04
12	GO:0048513: animal organ development	5.75E-04
13	GO:0048575: short-day photoperiodism, flowering	5.75E-04
14	GO:0090506: axillary shoot meristem initiation	5.75E-04
15	GO:0010321: regulation of vegetative phase change	8.23E-04
16	GO:0007276: gamete generation	8.23E-04
17	GO:0009686: gibberellin biosynthetic process	8.23E-04
18	GO:0016556: mRNA modification	8.23E-04
19	GO:0009733: response to auxin	9.74E-04
20	GO:0031122: cytoplasmic microtubule organization	1.09E-03
21	GO:0042991: transcription factor import into nucleus	1.09E-03
22	GO:0048629: trichome patterning	1.09E-03
23	GO:0000914: phragmoplast assembly	1.09E-03
24	GO:0007020: microtubule nucleation	1.09E-03
25	GO:0046785: microtubule polymerization	1.38E-03
26	GO:0048497: maintenance of floral organ identity	1.38E-03
27	GO:0009247: glycolipid biosynthetic process	1.38E-03
28	GO:0010190: cytochrome b6f complex assembly	1.70E-03
29	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	1.70E-03
30	GO:0010103: stomatal complex morphogenesis	2.39E-03
31	GO:0000712: resolution of meiotic recombination intermediates	2.39E-03
32	GO:0007050: cell cycle arrest	2.39E-03
33	GO:0030497: fatty acid elongation	2.39E-03
34	GO:0009704: de-etiolation	2.77E-03
35	GO:0010492: maintenance of shoot apical meristem identity	2.77E-03
36	GO:0006355: regulation of transcription, DNA-templated	2.77E-03
37	GO:0042255: ribosome assembly	2.77E-03
38	GO:0006353: DNA-templated transcription, termination	2.77E-03
39	GO:0048589: developmental growth	3.58E-03
40	GO:0009641: shade avoidance	4.46E-03
41	GO:0006949: syncytium formation	4.46E-03
42	GO:0006259: DNA metabolic process	4.46E-03
43	GO:0010629: negative regulation of gene expression	4.46E-03
44	GO:0019538: protein metabolic process	4.46E-03
45	GO:0048366: leaf development	4.71E-03
46	GO:0006265: DNA topological change	4.92E-03
47	GO:0008285: negative regulation of cell proliferation	4.92E-03
48	GO:0009664: plant-type cell wall organization	5.18E-03
49	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.25E-03
50	GO:0010152: pollen maturation	5.41E-03
51	GO:0006312: mitotic recombination	5.41E-03
52	GO:0012501: programmed cell death	5.41E-03
53	GO:0045037: protein import into chloroplast stroma	5.41E-03
54	GO:0010102: lateral root morphogenesis	5.91E-03
55	GO:0007034: vacuolar transport	6.42E-03
56	GO:0010223: secondary shoot formation	6.42E-03
57	GO:0006302: double-strand break repair	6.42E-03
58	GO:0048768: root hair cell tip growth	6.42E-03
59	GO:0045892: negative regulation of transcription, DNA-templated	6.45E-03
60	GO:0090351: seedling development	6.95E-03
61	GO:0009740: gibberellic acid mediated signaling pathway	7.45E-03
62	GO:0006636: unsaturated fatty acid biosynthetic process	7.49E-03
63	GO:0006863: purine nucleobase transport	7.49E-03
64	GO:0009624: response to nematode	7.91E-03
65	GO:0080147: root hair cell development	8.05E-03
66	GO:0019953: sexual reproduction	8.63E-03
67	GO:0048364: root development	8.71E-03
68	GO:0051321: meiotic cell cycle	9.22E-03
69	GO:0001944: vasculature development	1.04E-02
70	GO:0010091: trichome branching	1.11E-02
71	GO:0042127: regulation of cell proliferation	1.11E-02
72	GO:0048443: stamen development	1.11E-02
73	GO:0000271: polysaccharide biosynthetic process	1.24E-02
74	GO:0000413: protein peptidyl-prolyl isomerization	1.24E-02
75	GO:0009734: auxin-activated signaling pathway	1.28E-02
76	GO:0045489: pectin biosynthetic process	1.31E-02
77	GO:0007018: microtubule-based movement	1.37E-02
78	GO:0007059: chromosome segregation	1.37E-02
79	GO:0048825: cotyledon development	1.44E-02
80	GO:0009908: flower development	1.51E-02
81	GO:0071554: cell wall organization or biogenesis	1.52E-02
82	GO:0009739: response to gibberellin	1.54E-02
83	GO:0010583: response to cyclopentenone	1.59E-02
84	GO:0032502: developmental process	1.59E-02
85	GO:0030163: protein catabolic process	1.66E-02
86	GO:0009828: plant-type cell wall loosening	1.74E-02
87	GO:0009567: double fertilization forming a zygote and endosperm	1.74E-02
88	GO:0019760: glucosinolate metabolic process	1.74E-02
89	GO:0000910: cytokinesis	1.89E-02
90	GO:0010027: thylakoid membrane organization	1.97E-02
91	GO:0009826: unidimensional cell growth	2.05E-02
92	GO:0009658: chloroplast organization	2.13E-02
93	GO:0048573: photoperiodism, flowering	2.21E-02
94	GO:0016051: carbohydrate biosynthetic process	2.81E-02
95	GO:0006839: mitochondrial transport	3.09E-02
96	GO:0006631: fatty acid metabolic process	3.18E-02
97	GO:0071555: cell wall organization	4.12E-02
98	GO:0009736: cytokinin-activated signaling pathway	4.17E-02
99	GO:0006417: regulation of translation	4.48E-02
100	GO:0048367: shoot system development	4.80E-02
101	GO:0009873: ethylene-activated signaling pathway	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0046510: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
4	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	3.51E-04
5	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.73E-04
6	GO:0045544: gibberellin 20-oxidase activity	8.23E-04
7	GO:0003916: DNA topoisomerase activity	8.23E-04
8	GO:0010011: auxin binding	1.09E-03
9	GO:0004518: nuclease activity	1.45E-03
10	GO:0030332: cyclin binding	1.70E-03
11	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	1.70E-03
12	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.16E-03
13	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.16E-03
14	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.58E-03
15	GO:0046983: protein dimerization activity	5.04E-03
16	GO:0003725: double-stranded RNA binding	5.91E-03
17	GO:0003777: microtubule motor activity	6.15E-03
18	GO:0042803: protein homodimerization activity	6.71E-03
19	GO:0043565: sequence-specific DNA binding	6.77E-03
20	GO:0003712: transcription cofactor activity	6.95E-03
21	GO:0004190: aspartic-type endopeptidase activity	6.95E-03
22	GO:0003677: DNA binding	8.09E-03
23	GO:0005345: purine nucleobase transmembrane transporter activity	8.63E-03
24	GO:0004519: endonuclease activity	9.19E-03
25	GO:0008094: DNA-dependent ATPase activity	9.22E-03
26	GO:0033612: receptor serine/threonine kinase binding	9.22E-03
27	GO:0008408: 3'-5' exonuclease activity	9.22E-03
28	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.82E-03
29	GO:0003727: single-stranded RNA binding	1.11E-02
30	GO:0001085: RNA polymerase II transcription factor binding	1.31E-02
31	GO:0016853: isomerase activity	1.37E-02
32	GO:0016887: ATPase activity	1.44E-02
33	GO:0016413: O-acetyltransferase activity	1.89E-02
34	GO:0004672: protein kinase activity	2.05E-02
35	GO:0005096: GTPase activator activity	2.46E-02
36	GO:0030145: manganese ion binding	2.64E-02
37	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.64E-02
38	GO:0004722: protein serine/threonine phosphatase activity	3.46E-02
39	GO:0005198: structural molecule activity	3.66E-02
40	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.76E-02
41	GO:0044212: transcription regulatory region DNA binding	4.12E-02
42	GO:0003690: double-stranded DNA binding	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	1.54E-04
3	GO:0030870: Mre11 complex	3.51E-04
4	GO:0009532: plastid stroma	6.92E-04
5	GO:0009531: secondary cell wall	8.23E-04
6	GO:0031897: Tic complex	1.09E-03
7	GO:0000930: gamma-tubulin complex	1.09E-03
8	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.09E-03
9	GO:0000795: synaptonemal complex	1.38E-03
10	GO:0000815: ESCRT III complex	2.03E-03
11	GO:0009536: plastid	4.35E-03
12	GO:0005874: microtubule	4.82E-03
13	GO:0005938: cell cortex	5.91E-03
14	GO:0005875: microtubule associated complex	7.49E-03
15	GO:0005871: kinesin complex	1.17E-02
16	GO:0000785: chromatin	1.59E-02
17	GO:0005667: transcription factor complex	2.13E-02
18	GO:0031969: chloroplast membrane	2.64E-02
19	GO:0009941: chloroplast envelope	4.30E-02
20	GO:0005886: plasma membrane	4.97E-02