co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009606: tropism	0.00E+00
2	GO:0010541: acropetal auxin transport	5.89E-05
3	GO:0048255: mRNA stabilization	5.89E-05
4	GO:1902476: chloride transmembrane transport	1.55E-04
5	GO:0046785: microtubule polymerization	2.73E-04
6	GO:0009913: epidermal cell differentiation	3.37E-04
7	GO:0010315: auxin efflux	3.37E-04
8	GO:0006821: chloride transport	4.74E-04
9	GO:0006401: RNA catabolic process	4.74E-04
10	GO:0048766: root hair initiation	5.46E-04
11	GO:0007389: pattern specification process	6.21E-04
12	GO:0007623: circadian rhythm	1.17E-03
13	GO:0010540: basipetal auxin transport	1.20E-03
14	GO:0006468: protein phosphorylation	1.26E-03
15	GO:0007166: cell surface receptor signaling pathway	1.32E-03
16	GO:0007010: cytoskeleton organization	1.49E-03
17	GO:0043622: cortical microtubule organization	1.59E-03
18	GO:0007017: microtubule-based process	1.59E-03
19	GO:0010082: regulation of root meristem growth	1.91E-03
20	GO:0009693: ethylene biosynthetic process	1.91E-03
21	GO:0010051: xylem and phloem pattern formation	2.24E-03
22	GO:0008360: regulation of cell shape	2.36E-03
23	GO:0009958: positive gravitropism	2.36E-03
24	GO:0009630: gravitropism	2.84E-03
25	GO:0010090: trichome morphogenesis	2.96E-03
26	GO:0010252: auxin homeostasis	3.09E-03
27	GO:0008219: cell death	4.17E-03
28	GO:0009832: plant-type cell wall biogenesis	4.32E-03
29	GO:0048767: root hair elongation	4.32E-03
30	GO:0009853: photorespiration	4.90E-03
31	GO:0006897: endocytosis	5.52E-03
32	GO:0009416: response to light stimulus	5.67E-03
33	GO:0009926: auxin polar transport	5.84E-03
34	GO:0051707: response to other organism	5.84E-03
35	GO:0009736: cytokinin-activated signaling pathway	7.18E-03
36	GO:0006364: rRNA processing	7.18E-03
37	GO:0006457: protein folding	7.34E-03
38	GO:0018105: peptidyl-serine phosphorylation	9.36E-03
39	GO:0010150: leaf senescence	1.35E-02
40	GO:0010228: vegetative to reproductive phase transition of meristem	1.39E-02
41	GO:0010468: regulation of gene expression	1.53E-02
42	GO:0009658: chloroplast organization	1.84E-02
43	GO:0007049: cell cycle	1.99E-02
44	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.19E-02
45	GO:0046777: protein autophosphorylation	2.25E-02
46	GO:0016042: lipid catabolic process	2.77E-02
47	GO:0048364: root development	2.91E-02
48	GO:0016567: protein ubiquitination	3.51E-02
49	GO:0009734: auxin-activated signaling pathway	3.61E-02
50	GO:0009738: abscisic acid-activated signaling pathway	4.15E-02
51	GO:0035556: intracellular signal transduction	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0008859: exoribonuclease II activity	0.00E+00
2	GO:0017091: AU-rich element binding	2.30E-05
3	GO:0005253: anion channel activity	2.12E-04
4	GO:0005247: voltage-gated chloride channel activity	3.37E-04
5	GO:0004672: protein kinase activity	4.52E-04
6	GO:0004674: protein serine/threonine kinase activity	5.73E-04
7	GO:0009672: auxin:proton symporter activity	7.77E-04
8	GO:0004713: protein tyrosine kinase activity	8.59E-04
9	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.09E-03
10	GO:0000175: 3'-5'-exoribonuclease activity	1.12E-03
11	GO:0010329: auxin efflux transmembrane transporter activity	1.12E-03
12	GO:0005524: ATP binding	1.18E-03
13	GO:0008017: microtubule binding	1.22E-03
14	GO:0016301: kinase activity	1.27E-03
15	GO:0004540: ribonuclease activity	1.70E-03
16	GO:0004707: MAP kinase activity	1.70E-03
17	GO:0004721: phosphoprotein phosphatase activity	3.89E-03
18	GO:0051082: unfolded protein binding	9.17E-03
19	GO:0016788: hydrolase activity, acting on ester bonds	1.86E-02
20	GO:0052689: carboxylic ester hydrolase activity	2.30E-02
21	GO:0004871: signal transducer activity	2.52E-02
22	GO:0004722: protein serine/threonine phosphatase activity	2.60E-02
23	GO:0003676: nucleic acid binding	4.73E-02
24	GO:0016740: transferase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0070176: DRM complex	0.00E+00
2	GO:0055028: cortical microtubule	1.39E-05
3	GO:0012506: vesicle membrane	2.30E-05
4	GO:0016328: lateral plasma membrane	1.04E-04
5	GO:0000178: exosome (RNase complex)	2.73E-04
6	GO:0034707: chloride channel complex	3.37E-04
7	GO:0010005: cortical microtubule, transverse to long axis	4.04E-04
8	GO:0009986: cell surface	4.74E-04
9	GO:0045271: respiratory chain complex I	1.59E-03
10	GO:0000932: P-body	3.48E-03
11	GO:0005886: plasma membrane	4.25E-03
12	GO:0005819: spindle	5.21E-03
13	GO:0090406: pollen tube	5.84E-03
14	GO:0031966: mitochondrial membrane	6.83E-03
15	GO:0005747: mitochondrial respiratory chain complex I	8.24E-03
16	GO:0009524: phragmoplast	1.11E-02
17	GO:0009506: plasmodesma	4.50E-02