co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G08860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:0010055: atrichoblast differentiation	0.00E+00
3	GO:1902001: fatty acid transmembrane transport	0.00E+00
4	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
5	GO:0097237: cellular response to toxic substance	0.00E+00
6	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
7	GO:0046865: terpenoid transport	0.00E+00
8	GO:0018063: cytochrome c-heme linkage	0.00E+00
9	GO:0010112: regulation of systemic acquired resistance	7.52E-10
10	GO:0009753: response to jasmonic acid	3.03E-07
11	GO:0009611: response to wounding	2.70E-06
12	GO:1903507: negative regulation of nucleic acid-templated transcription	1.99E-05
13	GO:0009751: response to salicylic acid	2.58E-05
14	GO:0009643: photosynthetic acclimation	9.03E-05
15	GO:0009759: indole glucosinolate biosynthetic process	9.03E-05
16	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.95E-05
17	GO:0071456: cellular response to hypoxia	9.95E-05
18	GO:0040008: regulation of growth	1.19E-04
19	GO:1900056: negative regulation of leaf senescence	1.64E-04
20	GO:0042742: defense response to bacterium	1.84E-04
21	GO:0046467: membrane lipid biosynthetic process	2.34E-04
22	GO:1990542: mitochondrial transmembrane transport	2.34E-04
23	GO:0032107: regulation of response to nutrient levels	2.34E-04
24	GO:0015760: glucose-6-phosphate transport	2.34E-04
25	GO:0080173: male-female gamete recognition during double fertilization	2.34E-04
26	GO:0033306: phytol metabolic process	2.34E-04
27	GO:0009700: indole phytoalexin biosynthetic process	2.34E-04
28	GO:0010230: alternative respiration	2.34E-04
29	GO:0034214: protein hexamerization	2.34E-04
30	GO:0010120: camalexin biosynthetic process	2.59E-04
31	GO:0051607: defense response to virus	3.67E-04
32	GO:0071497: cellular response to freezing	5.20E-04
33	GO:0071668: plant-type cell wall assembly	5.20E-04
34	GO:0009838: abscission	5.20E-04
35	GO:0055088: lipid homeostasis	5.20E-04
36	GO:0019521: D-gluconate metabolic process	5.20E-04
37	GO:0019374: galactolipid metabolic process	5.20E-04
38	GO:0015908: fatty acid transport	5.20E-04
39	GO:0044419: interspecies interaction between organisms	5.20E-04
40	GO:0015712: hexose phosphate transport	5.20E-04
41	GO:0000719: photoreactive repair	5.20E-04
42	GO:0035436: triose phosphate transmembrane transport	8.44E-04
43	GO:0015692: lead ion transport	8.44E-04
44	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	8.44E-04
45	GO:0015714: phosphoenolpyruvate transport	8.44E-04
46	GO:0080168: abscisic acid transport	8.44E-04
47	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	8.44E-04
48	GO:0080163: regulation of protein serine/threonine phosphatase activity	8.44E-04
49	GO:0050832: defense response to fungus	9.29E-04
50	GO:0007166: cell surface receptor signaling pathway	1.03E-03
51	GO:0051707: response to other organism	1.03E-03
52	GO:0009617: response to bacterium	1.10E-03
53	GO:0009636: response to toxic substance	1.19E-03
54	GO:0051289: protein homotetramerization	1.20E-03
55	GO:0001676: long-chain fatty acid metabolic process	1.20E-03
56	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.20E-03
57	GO:0070301: cellular response to hydrogen peroxide	1.20E-03
58	GO:0031347: regulation of defense response	1.31E-03
59	GO:0006012: galactose metabolic process	1.44E-03
60	GO:0010109: regulation of photosynthesis	1.61E-03
61	GO:0048638: regulation of developmental growth	1.61E-03
62	GO:0048830: adventitious root development	1.61E-03
63	GO:1901002: positive regulation of response to salt stress	1.61E-03
64	GO:0015713: phosphoglycerate transport	1.61E-03
65	GO:0006952: defense response	1.76E-03
66	GO:0009723: response to ethylene	2.04E-03
67	GO:0034052: positive regulation of plant-type hypersensitive response	2.05E-03
68	GO:0080167: response to karrikin	2.27E-03
69	GO:0006623: protein targeting to vacuole	2.27E-03
70	GO:0009117: nucleotide metabolic process	2.52E-03
71	GO:0010256: endomembrane system organization	2.52E-03
72	GO:0006979: response to oxidative stress	2.57E-03
73	GO:0009094: L-phenylalanine biosynthetic process	3.03E-03
74	GO:0042372: phylloquinone biosynthetic process	3.03E-03
75	GO:1900057: positive regulation of leaf senescence	3.58E-03
76	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.58E-03
77	GO:1902074: response to salt	3.58E-03
78	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.58E-03
79	GO:0080186: developmental vegetative growth	3.58E-03
80	GO:0009737: response to abscisic acid	3.76E-03
81	GO:0009627: systemic acquired resistance	3.91E-03
82	GO:0043068: positive regulation of programmed cell death	4.15E-03
83	GO:0006605: protein targeting	4.15E-03
84	GO:0006644: phospholipid metabolic process	4.15E-03
85	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.15E-03
86	GO:0030091: protein repair	4.15E-03
87	GO:0010150: leaf senescence	4.68E-03
88	GO:0006997: nucleus organization	4.74E-03
89	GO:0010204: defense response signaling pathway, resistance gene-independent	4.74E-03
90	GO:0017004: cytochrome complex assembly	4.74E-03
91	GO:0010208: pollen wall assembly	4.74E-03
92	GO:0008152: metabolic process	4.75E-03
93	GO:0009813: flavonoid biosynthetic process	4.80E-03
94	GO:0009407: toxin catabolic process	5.04E-03
95	GO:0048527: lateral root development	5.28E-03
96	GO:0009835: fruit ripening	5.37E-03
97	GO:0006098: pentose-phosphate shunt	5.37E-03
98	GO:0019432: triglyceride biosynthetic process	5.37E-03
99	GO:0009867: jasmonic acid mediated signaling pathway	5.79E-03
100	GO:0009638: phototropism	6.03E-03
101	GO:0048268: clathrin coat assembly	6.03E-03
102	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.03E-03
103	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.71E-03
104	GO:0006032: chitin catabolic process	6.71E-03
105	GO:0009641: shade avoidance	6.71E-03
106	GO:0019538: protein metabolic process	6.71E-03
107	GO:0006897: endocytosis	6.88E-03
108	GO:0048229: gametophyte development	7.43E-03
109	GO:0009684: indoleacetic acid biosynthetic process	7.43E-03
110	GO:0009682: induced systemic resistance	7.43E-03
111	GO:0052544: defense response by callose deposition in cell wall	7.43E-03
112	GO:0002213: defense response to insect	8.17E-03
113	GO:2000028: regulation of photoperiodism, flowering	8.93E-03
114	GO:0009785: blue light signaling pathway	8.93E-03
115	GO:0042343: indole glucosinolate metabolic process	1.05E-02
116	GO:0000162: tryptophan biosynthetic process	1.14E-02
117	GO:0045893: positive regulation of transcription, DNA-templated	1.21E-02
118	GO:0080147: root hair cell development	1.22E-02
119	GO:0009626: plant-type hypersensitive response	1.27E-02
120	GO:0009695: jasmonic acid biosynthetic process	1.31E-02
121	GO:0051302: regulation of cell division	1.31E-02
122	GO:0016998: cell wall macromolecule catabolic process	1.40E-02
123	GO:0098542: defense response to other organism	1.40E-02
124	GO:0009411: response to UV	1.59E-02
125	GO:0009625: response to insect	1.59E-02
126	GO:0009693: ethylene biosynthetic process	1.59E-02
127	GO:0046686: response to cadmium ion	1.86E-02
128	GO:0000271: polysaccharide biosynthetic process	1.89E-02
129	GO:0000413: protein peptidyl-prolyl isomerization	1.89E-02
130	GO:0042391: regulation of membrane potential	1.89E-02
131	GO:0045489: pectin biosynthetic process	1.99E-02
132	GO:0006885: regulation of pH	1.99E-02
133	GO:0006520: cellular amino acid metabolic process	1.99E-02
134	GO:0048544: recognition of pollen	2.10E-02
135	GO:0055114: oxidation-reduction process	2.18E-02
136	GO:0009749: response to glucose	2.20E-02
137	GO:0000302: response to reactive oxygen species	2.31E-02
138	GO:0006635: fatty acid beta-oxidation	2.31E-02
139	GO:0071554: cell wall organization or biogenesis	2.31E-02
140	GO:0002229: defense response to oomycetes	2.31E-02
141	GO:0010193: response to ozone	2.31E-02
142	GO:0009630: gravitropism	2.42E-02
143	GO:0006468: protein phosphorylation	2.48E-02
144	GO:0019760: glucosinolate metabolic process	2.65E-02
145	GO:0009414: response to water deprivation	2.72E-02
146	GO:0009615: response to virus	3.01E-02
147	GO:0007165: signal transduction	3.03E-02
148	GO:0010029: regulation of seed germination	3.13E-02
149	GO:0009816: defense response to bacterium, incompatible interaction	3.13E-02
150	GO:0006906: vesicle fusion	3.25E-02
151	GO:0009555: pollen development	3.60E-02
152	GO:0010311: lateral root formation	3.76E-02
153	GO:0015031: protein transport	3.99E-02
154	GO:0009631: cold acclimation	4.03E-02
155	GO:0006970: response to osmotic stress	4.14E-02
156	GO:0016051: carbohydrate biosynthetic process	4.30E-02
157	GO:0009853: photorespiration	4.30E-02
158	GO:0034599: cellular response to oxidative stress	4.43E-02
159	GO:0006887: exocytosis	4.85E-02
160	GO:0010200: response to chitin	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0003714: transcription corepressor activity	6.42E-05
4	GO:2001147: camalexin binding	2.34E-04
5	GO:0015245: fatty acid transporter activity	2.34E-04
6	GO:0090353: polygalacturonase inhibitor activity	2.34E-04
7	GO:2001227: quercitrin binding	2.34E-04
8	GO:0047617: acyl-CoA hydrolase activity	3.73E-04
9	GO:0004385: guanylate kinase activity	5.20E-04
10	GO:0015152: glucose-6-phosphate transmembrane transporter activity	5.20E-04
11	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	5.20E-04
12	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	5.20E-04
13	GO:0050736: O-malonyltransferase activity	5.20E-04
14	GO:0071917: triose-phosphate transmembrane transporter activity	8.44E-04
15	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	8.44E-04
16	GO:0001046: core promoter sequence-specific DNA binding	1.01E-03
17	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.20E-03
18	GO:0017077: oxidative phosphorylation uncoupler activity	1.20E-03
19	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.57E-03
20	GO:0009916: alternative oxidase activity	1.61E-03
21	GO:0015120: phosphoglycerate transmembrane transporter activity	1.61E-03
22	GO:0047769: arogenate dehydratase activity	1.61E-03
23	GO:0004664: prephenate dehydratase activity	1.61E-03
24	GO:0003995: acyl-CoA dehydrogenase activity	1.61E-03
25	GO:0018685: alkane 1-monooxygenase activity	2.05E-03
26	GO:0003997: acyl-CoA oxidase activity	2.05E-03
27	GO:0005496: steroid binding	2.05E-03
28	GO:0016758: transferase activity, transferring hexosyl groups	3.00E-03
29	GO:0004144: diacylglycerol O-acyltransferase activity	3.03E-03
30	GO:0004656: procollagen-proline 4-dioxygenase activity	3.03E-03
31	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.03E-03
32	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.03E-03
33	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.03E-03
34	GO:0003978: UDP-glucose 4-epimerase activity	3.03E-03
35	GO:0051213: dioxygenase activity	3.51E-03
36	GO:0043295: glutathione binding	3.58E-03
37	GO:0004620: phospholipase activity	3.58E-03
38	GO:0043565: sequence-specific DNA binding	3.75E-03
39	GO:0030247: polysaccharide binding	4.13E-03
40	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.15E-03
41	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	4.15E-03
42	GO:0004034: aldose 1-epimerase activity	4.15E-03
43	GO:0004033: aldo-keto reductase (NADP) activity	4.15E-03
44	GO:0008194: UDP-glycosyltransferase activity	5.39E-03
45	GO:0050661: NADP binding	6.60E-03
46	GO:0004568: chitinase activity	6.71E-03
47	GO:0005545: 1-phosphatidylinositol binding	6.71E-03
48	GO:0015020: glucuronosyltransferase activity	6.71E-03
49	GO:0004864: protein phosphatase inhibitor activity	6.71E-03
50	GO:0004364: glutathione transferase activity	7.17E-03
51	GO:0005198: structural molecule activity	8.39E-03
52	GO:0005315: inorganic phosphate transmembrane transporter activity	8.93E-03
53	GO:0050660: flavin adenine dinucleotide binding	9.82E-03
54	GO:0016757: transferase activity, transferring glycosyl groups	1.03E-02
55	GO:0030552: cAMP binding	1.05E-02
56	GO:0030553: cGMP binding	1.05E-02
57	GO:0004497: monooxygenase activity	1.07E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.31E-02
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.31E-02
60	GO:0005216: ion channel activity	1.31E-02
61	GO:0042803: protein homodimerization activity	1.43E-02
62	GO:0004871: signal transducer activity	1.43E-02
63	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.49E-02
64	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.50E-02
65	GO:0019825: oxygen binding	1.67E-02
66	GO:0005451: monovalent cation:proton antiporter activity	1.89E-02
67	GO:0005249: voltage-gated potassium channel activity	1.89E-02
68	GO:0030551: cyclic nucleotide binding	1.89E-02
69	GO:0020037: heme binding	1.90E-02
70	GO:0005199: structural constituent of cell wall	1.99E-02
71	GO:0030276: clathrin binding	1.99E-02
72	GO:0030170: pyridoxal phosphate binding	2.00E-02
73	GO:0016853: isomerase activity	2.10E-02
74	GO:0015299: solute:proton antiporter activity	2.10E-02
75	GO:0004674: protein serine/threonine kinase activity	2.23E-02
76	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.32E-02
77	GO:0004197: cysteine-type endopeptidase activity	2.42E-02
78	GO:0005509: calcium ion binding	2.50E-02
79	GO:0015385: sodium:proton antiporter activity	2.54E-02
80	GO:0016791: phosphatase activity	2.65E-02
81	GO:0005506: iron ion binding	2.75E-02
82	GO:0008483: transaminase activity	2.77E-02
83	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.77E-02
84	GO:0008237: metallopeptidase activity	2.77E-02
85	GO:0016413: O-acetyltransferase activity	2.89E-02
86	GO:0016597: amino acid binding	2.89E-02
87	GO:0016301: kinase activity	3.31E-02
88	GO:0004806: triglyceride lipase activity	3.38E-02
89	GO:0004721: phosphoprotein phosphatase activity	3.38E-02
90	GO:0005096: GTPase activator activity	3.76E-02
91	GO:0004222: metalloendopeptidase activity	3.89E-02
92	GO:0030145: manganese ion binding	4.03E-02
93	GO:0050897: cobalt ion binding	4.03E-02
94	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.30E-02
95	GO:0000149: SNARE binding	4.57E-02
96	GO:0004672: protein kinase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0016021: integral component of membrane	2.72E-05
3	GO:0005886: plasma membrane	4.26E-04
4	GO:0005901: caveola	5.20E-04
5	GO:0009530: primary cell wall	8.44E-04
6	GO:0031225: anchored component of membrane	1.51E-03
7	GO:0005794: Golgi apparatus	1.86E-03
8	GO:0000164: protein phosphatase type 1 complex	2.05E-03
9	GO:0031965: nuclear membrane	2.27E-03
10	GO:0017119: Golgi transport complex	6.71E-03
11	GO:0005768: endosome	7.20E-03
12	GO:0031012: extracellular matrix	8.93E-03
13	GO:0070469: respiratory chain	1.31E-02
14	GO:0005905: clathrin-coated pit	1.40E-02
15	GO:0005743: mitochondrial inner membrane	1.60E-02
16	GO:0030136: clathrin-coated vesicle	1.79E-02
17	GO:0005789: endoplasmic reticulum membrane	1.80E-02
18	GO:0005802: trans-Golgi network	1.99E-02
19	GO:0043231: intracellular membrane-bounded organelle	1.99E-02
20	GO:0005770: late endosome	1.99E-02
21	GO:0009504: cell plate	2.20E-02
22	GO:0005788: endoplasmic reticulum lumen	3.13E-02
23	GO:0046658: anchored component of plasma membrane	3.30E-02
24	GO:0005618: cell wall	3.59E-02
25	GO:0009506: plasmodesma	3.83E-02
26	GO:0005777: peroxisome	4.27E-02
27	GO:0005783: endoplasmic reticulum	4.50E-02
28	GO:0031201: SNARE complex	4.85E-02