Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002764: immune response-regulating signaling pathway0.00E+00
2GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
7GO:1902001: fatty acid transmembrane transport0.00E+00
8GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
9GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
10GO:0009312: oligosaccharide biosynthetic process0.00E+00
11GO:0015690: aluminum cation transport0.00E+00
12GO:1900367: positive regulation of defense response to insect0.00E+00
13GO:0010200: response to chitin9.95E-08
14GO:0009751: response to salicylic acid5.59E-07
15GO:0010112: regulation of systemic acquired resistance1.63E-06
16GO:0071456: cellular response to hypoxia1.93E-06
17GO:0006952: defense response2.04E-06
18GO:0060548: negative regulation of cell death2.06E-06
19GO:0010150: leaf senescence5.70E-06
20GO:0019725: cellular homeostasis1.28E-05
21GO:0031348: negative regulation of defense response4.45E-05
22GO:0009625: response to insect5.30E-05
23GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.38E-05
24GO:0051707: response to other organism1.41E-04
25GO:0080142: regulation of salicylic acid biosynthetic process1.57E-04
26GO:0045227: capsule polysaccharide biosynthetic process1.57E-04
27GO:0033358: UDP-L-arabinose biosynthetic process1.57E-04
28GO:0006979: response to oxidative stress1.59E-04
29GO:0009611: response to wounding2.30E-04
30GO:0009266: response to temperature stimulus2.35E-04
31GO:0009737: response to abscisic acid2.36E-04
32GO:0010225: response to UV-C2.40E-04
33GO:0009697: salicylic acid biosynthetic process2.40E-04
34GO:0050832: defense response to fungus2.97E-04
35GO:0009643: photosynthetic acclimation3.38E-04
36GO:0009626: plant-type hypersensitive response3.99E-04
37GO:0006468: protein phosphorylation4.03E-04
38GO:0009700: indole phytoalexin biosynthetic process5.40E-04
39GO:0042759: long-chain fatty acid biosynthetic process5.40E-04
40GO:1990542: mitochondrial transmembrane transport5.40E-04
41GO:0048508: embryonic meristem development5.40E-04
42GO:0051938: L-glutamate import5.40E-04
43GO:0015760: glucose-6-phosphate transport5.40E-04
44GO:0046256: 2,4,6-trinitrotoluene catabolic process5.40E-04
45GO:0019567: arabinose biosynthetic process5.40E-04
46GO:0080173: male-female gamete recognition during double fertilization5.40E-04
47GO:0010421: hydrogen peroxide-mediated programmed cell death5.40E-04
48GO:1901183: positive regulation of camalexin biosynthetic process5.40E-04
49GO:0009270: response to humidity5.40E-04
50GO:0033306: phytol metabolic process5.40E-04
51GO:1900056: negative regulation of leaf senescence5.77E-04
52GO:0009867: jasmonic acid mediated signaling pathway6.09E-04
53GO:0042391: regulation of membrane potential8.21E-04
54GO:0010204: defense response signaling pathway, resistance gene-independent8.74E-04
55GO:2000031: regulation of salicylic acid mediated signaling pathway8.74E-04
56GO:0010120: camalexin biosynthetic process8.74E-04
57GO:0009646: response to absence of light9.87E-04
58GO:0006098: pentose-phosphate shunt1.04E-03
59GO:0010271: regulation of chlorophyll catabolic process1.16E-03
60GO:0015908: fatty acid transport1.16E-03
61GO:0044419: interspecies interaction between organisms1.16E-03
62GO:0009945: radial axis specification1.16E-03
63GO:0015712: hexose phosphate transport1.16E-03
64GO:0071668: plant-type cell wall assembly1.16E-03
65GO:0051258: protein polymerization1.16E-03
66GO:0043091: L-arginine import1.16E-03
67GO:0015914: phospholipid transport1.16E-03
68GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.16E-03
69GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.16E-03
70GO:0009838: abscission1.16E-03
71GO:0015802: basic amino acid transport1.16E-03
72GO:0010618: aerenchyma formation1.16E-03
73GO:0080181: lateral root branching1.16E-03
74GO:0055088: lipid homeostasis1.16E-03
75GO:0019521: D-gluconate metabolic process1.16E-03
76GO:0010115: regulation of abscisic acid biosynthetic process1.16E-03
77GO:0015865: purine nucleotide transport1.16E-03
78GO:0010193: response to ozone1.17E-03
79GO:1900426: positive regulation of defense response to bacterium1.23E-03
80GO:0042742: defense response to bacterium1.44E-03
81GO:0007166: cell surface receptor signaling pathway1.66E-03
82GO:0009617: response to bacterium1.80E-03
83GO:0034051: negative regulation of plant-type hypersensitive response1.91E-03
84GO:0016045: detection of bacterium1.91E-03
85GO:0010498: proteasomal protein catabolic process1.91E-03
86GO:1900140: regulation of seedling development1.91E-03
87GO:0010359: regulation of anion channel activity1.91E-03
88GO:0035436: triose phosphate transmembrane transport1.91E-03
89GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.91E-03
90GO:0045793: positive regulation of cell size1.91E-03
91GO:0010186: positive regulation of cellular defense response1.91E-03
92GO:0015692: lead ion transport1.91E-03
93GO:0015714: phosphoenolpyruvate transport1.91E-03
94GO:0015695: organic cation transport1.91E-03
95GO:0080168: abscisic acid transport1.91E-03
96GO:1900055: regulation of leaf senescence1.91E-03
97GO:0006954: inflammatory response1.91E-03
98GO:0009816: defense response to bacterium, incompatible interaction2.02E-03
99GO:0009620: response to fungus2.11E-03
100GO:0009225: nucleotide-sugar metabolic process2.74E-03
101GO:0015696: ammonium transport2.76E-03
102GO:0072583: clathrin-dependent endocytosis2.76E-03
103GO:0051289: protein homotetramerization2.76E-03
104GO:0046513: ceramide biosynthetic process2.76E-03
105GO:0002679: respiratory burst involved in defense response2.76E-03
106GO:0046836: glycolipid transport2.76E-03
107GO:0010116: positive regulation of abscisic acid biosynthetic process2.76E-03
108GO:0009753: response to jasmonic acid2.76E-03
109GO:0048194: Golgi vesicle budding2.76E-03
110GO:0046902: regulation of mitochondrial membrane permeability2.76E-03
111GO:0010731: protein glutathionylation2.76E-03
112GO:0009407: toxin catabolic process3.00E-03
113GO:2000377: regulation of reactive oxygen species metabolic process3.40E-03
114GO:0010508: positive regulation of autophagy3.72E-03
115GO:0015713: phosphoglycerate transport3.72E-03
116GO:1901141: regulation of lignin biosynthetic process3.72E-03
117GO:0010109: regulation of photosynthesis3.72E-03
118GO:0010483: pollen tube reception3.72E-03
119GO:0048638: regulation of developmental growth3.72E-03
120GO:0009652: thigmotropism3.72E-03
121GO:0072488: ammonium transmembrane transport3.72E-03
122GO:0009164: nucleoside catabolic process4.78E-03
123GO:0018344: protein geranylgeranylation4.78E-03
124GO:0034052: positive regulation of plant-type hypersensitive response4.78E-03
125GO:0006012: galactose metabolic process4.93E-03
126GO:0009636: response to toxic substance5.75E-03
127GO:0010337: regulation of salicylic acid metabolic process5.92E-03
128GO:0009117: nucleotide metabolic process5.92E-03
129GO:0006574: valine catabolic process5.92E-03
130GO:0002238: response to molecule of fungal origin5.92E-03
131GO:0018258: protein O-linked glycosylation via hydroxyproline5.92E-03
132GO:0009759: indole glucosinolate biosynthetic process5.92E-03
133GO:0010942: positive regulation of cell death5.92E-03
134GO:0010405: arabinogalactan protein metabolic process5.92E-03
135GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.92E-03
136GO:0006855: drug transmembrane transport6.04E-03
137GO:0006470: protein dephosphorylation6.88E-03
138GO:0009942: longitudinal axis specification7.16E-03
139GO:0010310: regulation of hydrogen peroxide metabolic process7.16E-03
140GO:0042372: phylloquinone biosynthetic process7.16E-03
141GO:0045926: negative regulation of growth7.16E-03
142GO:0009612: response to mechanical stimulus7.16E-03
143GO:0006486: protein glycosylation7.26E-03
144GO:0009749: response to glucose7.85E-03
145GO:0050829: defense response to Gram-negative bacterium8.47E-03
146GO:1902074: response to salt8.47E-03
147GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.47E-03
148GO:0043090: amino acid import8.47E-03
149GO:0071446: cellular response to salicylic acid stimulus8.47E-03
150GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c8.47E-03
151GO:0009787: regulation of abscisic acid-activated signaling pathway9.87E-03
152GO:0009819: drought recovery9.87E-03
153GO:0043068: positive regulation of programmed cell death9.87E-03
154GO:0030091: protein repair9.87E-03
155GO:0009414: response to water deprivation1.05E-02
156GO:0030968: endoplasmic reticulum unfolded protein response1.13E-02
157GO:0010208: pollen wall assembly1.13E-02
158GO:0010099: regulation of photomorphogenesis1.13E-02
159GO:0009624: response to nematode1.14E-02
160GO:0055085: transmembrane transport1.18E-02
161GO:0046916: cellular transition metal ion homeostasis1.29E-02
162GO:0019432: triglyceride biosynthetic process1.29E-02
163GO:0051865: protein autoubiquitination1.29E-02
164GO:0009051: pentose-phosphate shunt, oxidative branch1.29E-02
165GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.29E-02
166GO:0009627: systemic acquired resistance1.37E-02
167GO:0006950: response to stress1.44E-02
168GO:0048354: mucilage biosynthetic process involved in seed coat development1.45E-02
169GO:0010380: regulation of chlorophyll biosynthetic process1.45E-02
170GO:0048268: clathrin coat assembly1.45E-02
171GO:0009870: defense response signaling pathway, resistance gene-dependent1.62E-02
172GO:0006032: chitin catabolic process1.62E-02
173GO:0007064: mitotic sister chromatid cohesion1.62E-02
174GO:0046777: protein autophosphorylation1.67E-02
175GO:0048229: gametophyte development1.80E-02
176GO:0019684: photosynthesis, light reaction1.80E-02
177GO:0009089: lysine biosynthetic process via diaminopimelate1.80E-02
178GO:0072593: reactive oxygen species metabolic process1.80E-02
179GO:0007568: aging1.85E-02
180GO:0010119: regulation of stomatal movement1.85E-02
181GO:0002213: defense response to insect1.98E-02
182GO:0010105: negative regulation of ethylene-activated signaling pathway1.98E-02
183GO:0008361: regulation of cell size1.98E-02
184GO:0012501: programmed cell death1.98E-02
185GO:0006006: glucose metabolic process2.17E-02
186GO:0055046: microgametogenesis2.17E-02
187GO:0006829: zinc II ion transport2.17E-02
188GO:0007165: signal transduction2.22E-02
189GO:0002237: response to molecule of bacterial origin2.36E-02
190GO:0034605: cellular response to heat2.36E-02
191GO:0007034: vacuolar transport2.36E-02
192GO:0016567: protein ubiquitination2.37E-02
193GO:0006897: endocytosis2.42E-02
194GO:0010167: response to nitrate2.56E-02
195GO:0046854: phosphatidylinositol phosphorylation2.56E-02
196GO:0046688: response to copper ion2.56E-02
197GO:0009744: response to sucrose2.62E-02
198GO:0009408: response to heat2.70E-02
199GO:0009863: salicylic acid mediated signaling pathway2.98E-02
200GO:0080147: root hair cell development2.98E-02
201GO:0031347: regulation of defense response3.17E-02
202GO:0006825: copper ion transport3.20E-02
203GO:0006812: cation transport3.29E-02
204GO:0003333: amino acid transmembrane transport3.42E-02
205GO:0016998: cell wall macromolecule catabolic process3.42E-02
206GO:0009269: response to desiccation3.42E-02
207GO:2000022: regulation of jasmonic acid mediated signaling pathway3.65E-02
208GO:0010017: red or far-red light signaling pathway3.65E-02
209GO:0016226: iron-sulfur cluster assembly3.65E-02
210GO:0009561: megagametogenesis4.12E-02
211GO:0070417: cellular response to cold4.36E-02
212GO:0000271: polysaccharide biosynthetic process4.61E-02
213GO:0000413: protein peptidyl-prolyl isomerization4.61E-02
214GO:0042631: cellular response to water deprivation4.61E-02
215GO:0006885: regulation of pH4.86E-02
216GO:0045489: pectin biosynthetic process4.86E-02
217GO:0009409: response to cold4.98E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
4GO:0004168: dolichol kinase activity0.00E+00
5GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
6GO:0016301: kinase activity8.21E-06
7GO:0004674: protein serine/threonine kinase activity1.27E-04
8GO:0050373: UDP-arabinose 4-epimerase activity1.57E-04
9GO:0030552: cAMP binding2.76E-04
10GO:0030553: cGMP binding2.76E-04
11GO:0005216: ion channel activity4.21E-04
12GO:0004012: phospholipid-translocating ATPase activity4.50E-04
13GO:0003978: UDP-glucose 4-epimerase activity4.50E-04
14GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.50E-04
15GO:0019707: protein-cysteine S-acyltransferase activity5.40E-04
16GO:2001147: camalexin binding5.40E-04
17GO:0015245: fatty acid transporter activity5.40E-04
18GO:0010285: L,L-diaminopimelate aminotransferase activity5.40E-04
19GO:0032050: clathrin heavy chain binding5.40E-04
20GO:2001227: quercitrin binding5.40E-04
21GO:0004662: CAAX-protein geranylgeranyltransferase activity5.40E-04
22GO:0043295: glutathione binding5.77E-04
23GO:0004714: transmembrane receptor protein tyrosine kinase activity7.18E-04
24GO:0005249: voltage-gated potassium channel activity8.21E-04
25GO:0030551: cyclic nucleotide binding8.21E-04
26GO:0019901: protein kinase binding1.08E-03
27GO:0004385: guanylate kinase activity1.16E-03
28GO:0048531: beta-1,3-galactosyltransferase activity1.16E-03
29GO:0050291: sphingosine N-acyltransferase activity1.16E-03
30GO:0047364: desulfoglucosinolate sulfotransferase activity1.16E-03
31GO:0015152: glucose-6-phosphate transmembrane transporter activity1.16E-03
32GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.16E-03
33GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.16E-03
34GO:0001671: ATPase activator activity1.16E-03
35GO:0005509: calcium ion binding1.17E-03
36GO:0004568: chitinase activity1.44E-03
37GO:0008559: xenobiotic-transporting ATPase activity1.66E-03
38GO:0005524: ATP binding1.67E-03
39GO:0032403: protein complex binding1.91E-03
40GO:0071917: triose-phosphate transmembrane transporter activity1.91E-03
41GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.91E-03
42GO:0004324: ferredoxin-NADP+ reductase activity1.91E-03
43GO:0016531: copper chaperone activity1.91E-03
44GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.17E-03
45GO:0015181: arginine transmembrane transporter activity2.76E-03
46GO:0017077: oxidative phosphorylation uncoupler activity2.76E-03
47GO:0015189: L-lysine transmembrane transporter activity2.76E-03
48GO:0017089: glycolipid transporter activity2.76E-03
49GO:0019199: transmembrane receptor protein kinase activity3.72E-03
50GO:0015120: phosphoglycerate transmembrane transporter activity3.72E-03
51GO:0004737: pyruvate decarboxylase activity3.72E-03
52GO:0004345: glucose-6-phosphate dehydrogenase activity3.72E-03
53GO:0051861: glycolipid binding3.72E-03
54GO:0005313: L-glutamate transmembrane transporter activity3.72E-03
55GO:0043424: protein histidine kinase binding3.75E-03
56GO:0033612: receptor serine/threonine kinase binding4.13E-03
57GO:0019706: protein-cysteine S-palmitoyltransferase activity4.13E-03
58GO:0050661: NADP binding4.23E-03
59GO:0004364: glutathione transferase activity4.71E-03
60GO:0005496: steroid binding4.78E-03
61GO:0047631: ADP-ribose diphosphatase activity4.78E-03
62GO:0005471: ATP:ADP antiporter activity4.78E-03
63GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.78E-03
64GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.04E-03
65GO:0004499: N,N-dimethylaniline monooxygenase activity5.37E-03
66GO:0008519: ammonium transmembrane transporter activity5.92E-03
67GO:0030976: thiamine pyrophosphate binding5.92E-03
68GO:0004605: phosphatidate cytidylyltransferase activity5.92E-03
69GO:1990714: hydroxyproline O-galactosyltransferase activity5.92E-03
70GO:0000210: NAD+ diphosphatase activity5.92E-03
71GO:0003950: NAD+ ADP-ribosyltransferase activity7.16E-03
72GO:0004144: diacylglycerol O-acyltransferase activity7.16E-03
73GO:0005261: cation channel activity7.16E-03
74GO:0033743: peptide-methionine (R)-S-oxide reductase activity7.16E-03
75GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides7.16E-03
76GO:0016831: carboxy-lyase activity8.47E-03
77GO:0004842: ubiquitin-protein transferase activity8.68E-03
78GO:0004197: cysteine-type endopeptidase activity8.98E-03
79GO:0005515: protein binding9.00E-03
80GO:0043565: sequence-specific DNA binding9.55E-03
81GO:0005544: calcium-dependent phospholipid binding9.87E-03
82GO:0004033: aldo-keto reductase (NADP) activity9.87E-03
83GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.09E-02
84GO:0004430: 1-phosphatidylinositol 4-kinase activity1.13E-02
85GO:0008271: secondary active sulfate transmembrane transporter activity1.13E-02
86GO:0043531: ADP binding1.26E-02
87GO:0071949: FAD binding1.29E-02
88GO:0008375: acetylglucosaminyltransferase activity1.37E-02
89GO:0047617: acyl-CoA hydrolase activity1.45E-02
90GO:0015174: basic amino acid transmembrane transporter activity1.45E-02
91GO:0016758: transferase activity, transferring hexosyl groups1.47E-02
92GO:0004497: monooxygenase activity1.51E-02
93GO:0008171: O-methyltransferase activity1.62E-02
94GO:0005545: 1-phosphatidylinositol binding1.62E-02
95GO:0015020: glucuronosyltransferase activity1.62E-02
96GO:0015238: drug transmembrane transporter activity1.68E-02
97GO:0005543: phospholipid binding1.80E-02
98GO:0015116: sulfate transmembrane transporter activity1.98E-02
99GO:0008378: galactosyltransferase activity1.98E-02
100GO:0004521: endoribonuclease activity1.98E-02
101GO:0015297: antiporter activity2.16E-02
102GO:0005315: inorganic phosphate transmembrane transporter activity2.17E-02
103GO:0004722: protein serine/threonine phosphatase activity2.27E-02
104GO:0004672: protein kinase activity2.47E-02
105GO:0008146: sulfotransferase activity2.56E-02
106GO:0004190: aspartic-type endopeptidase activity2.56E-02
107GO:0015293: symporter activity2.95E-02
108GO:0003954: NADH dehydrogenase activity2.98E-02
109GO:0009055: electron carrier activity3.00E-02
110GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.09E-02
111GO:0051087: chaperone binding3.20E-02
112GO:0008324: cation transmembrane transporter activity3.20E-02
113GO:0004707: MAP kinase activity3.42E-02
114GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.65E-02
115GO:0000287: magnesium ion binding3.85E-02
116GO:0015171: amino acid transmembrane transporter activity3.91E-02
117GO:0005507: copper ion binding3.99E-02
118GO:0005516: calmodulin binding4.37E-02
119GO:0005451: monovalent cation:proton antiporter activity4.61E-02
120GO:0050660: flavin adenine dinucleotide binding4.71E-02
121GO:0005199: structural constituent of cell wall4.86E-02
122GO:0046873: metal ion transmembrane transporter activity4.86E-02
123GO:0030276: clathrin binding4.86E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005886: plasma membrane1.38E-09
3GO:0016021: integral component of membrane9.24E-07
4GO:0005901: caveola1.28E-05
5GO:0000813: ESCRT I complex2.40E-04
6GO:0005758: mitochondrial intermembrane space3.69E-04
7GO:0005953: CAAX-protein geranylgeranyltransferase complex5.40E-04
8GO:0000138: Golgi trans cisterna5.40E-04
9GO:0031304: intrinsic component of mitochondrial inner membrane1.16E-03
10GO:0008287: protein serine/threonine phosphatase complex1.91E-03
11GO:0030139: endocytic vesicle1.91E-03
12GO:0009530: primary cell wall1.91E-03
13GO:0042406: extrinsic component of endoplasmic reticulum membrane1.91E-03
14GO:0005774: vacuolar membrane2.94E-03
15GO:0016363: nuclear matrix7.16E-03
16GO:0032580: Golgi cisterna membrane1.02E-02
17GO:0005794: Golgi apparatus1.14E-02
18GO:0005887: integral component of plasma membrane1.40E-02
19GO:0030125: clathrin vesicle coat1.62E-02
20GO:0005740: mitochondrial envelope1.62E-02
21GO:0000325: plant-type vacuole1.85E-02
22GO:0031012: extracellular matrix2.17E-02
23GO:0031902: late endosome membrane2.42E-02
24GO:0005795: Golgi stack2.56E-02
25GO:0030176: integral component of endoplasmic reticulum membrane2.56E-02
26GO:0005769: early endosome2.77E-02
27GO:0005777: peroxisome2.80E-02
28GO:0070469: respiratory chain3.20E-02
29GO:0005905: clathrin-coated pit3.42E-02
30GO:0030136: clathrin-coated vesicle4.36E-02
31GO:0031225: anchored component of membrane4.63E-02
32GO:0005802: trans-Golgi network4.83E-02
33GO:0005770: late endosome4.86E-02
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Gene type



Gene DE type