Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G06690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010021: amylopectin biosynthetic process1.51E-06
2GO:0009090: homoserine biosynthetic process3.50E-05
3GO:0019276: UDP-N-acetylgalactosamine metabolic process3.50E-05
4GO:0006047: UDP-N-acetylglucosamine metabolic process3.50E-05
5GO:0050793: regulation of developmental process8.78E-05
6GO:0010353: response to trehalose8.78E-05
7GO:0030388: fructose 1,6-bisphosphate metabolic process8.78E-05
8GO:0015804: neutral amino acid transport8.78E-05
9GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.52E-04
10GO:0006000: fructose metabolic process1.52E-04
11GO:0019252: starch biosynthetic process1.87E-04
12GO:0009067: aspartate family amino acid biosynthetic process2.25E-04
13GO:0006164: purine nucleotide biosynthetic process2.25E-04
14GO:0010600: regulation of auxin biosynthetic process3.05E-04
15GO:0009088: threonine biosynthetic process5.70E-04
16GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.70E-04
17GO:0010161: red light signaling pathway6.66E-04
18GO:0009610: response to symbiotic fungus6.66E-04
19GO:0010196: nonphotochemical quenching6.66E-04
20GO:0009704: de-etiolation7.68E-04
21GO:0010928: regulation of auxin mediated signaling pathway7.68E-04
22GO:0005978: glycogen biosynthetic process7.68E-04
23GO:0006002: fructose 6-phosphate metabolic process8.71E-04
24GO:0006189: 'de novo' IMP biosynthetic process9.78E-04
25GO:0042761: very long-chain fatty acid biosynthetic process1.09E-03
26GO:0005982: starch metabolic process1.09E-03
27GO:0009086: methionine biosynthetic process1.09E-03
28GO:0009089: lysine biosynthetic process via diaminopimelate1.32E-03
29GO:0009773: photosynthetic electron transport in photosystem I1.32E-03
30GO:0005983: starch catabolic process1.44E-03
31GO:0018107: peptidyl-threonine phosphorylation1.57E-03
32GO:0006094: gluconeogenesis1.57E-03
33GO:0005986: sucrose biosynthetic process1.57E-03
34GO:0019253: reductive pentose-phosphate cycle1.70E-03
35GO:0005985: sucrose metabolic process1.84E-03
36GO:0006636: unsaturated fatty acid biosynthetic process1.97E-03
37GO:0003333: amino acid transmembrane transport2.41E-03
38GO:0051260: protein homooligomerization2.41E-03
39GO:0019748: secondary metabolic process2.56E-03
40GO:0010017: red or far-red light signaling pathway2.56E-03
41GO:0009723: response to ethylene3.45E-03
42GO:0032259: methylation5.21E-03
43GO:0015995: chlorophyll biosynthetic process5.58E-03
44GO:0007568: aging6.61E-03
45GO:0009631: cold acclimation6.61E-03
46GO:0006865: amino acid transport6.83E-03
47GO:0009585: red, far-red light phototransduction1.04E-02
48GO:0006813: potassium ion transport1.04E-02
49GO:0016310: phosphorylation1.07E-02
50GO:0055114: oxidation-reduction process1.23E-02
51GO:0009553: embryo sac development1.30E-02
52GO:0018105: peptidyl-serine phosphorylation1.36E-02
53GO:0009739: response to gibberellin2.12E-02
54GO:0009733: response to auxin2.20E-02
55GO:0044550: secondary metabolite biosynthetic process3.31E-02
56GO:0015979: photosynthesis3.42E-02
57GO:0045454: cell redox homeostasis3.54E-02
58GO:0009408: response to heat4.11E-02
59GO:0009753: response to jasmonic acid4.32E-02
60GO:0008152: metabolic process4.41E-02
61GO:0009793: embryo development ending in seed dormancy4.52E-02
RankGO TermAdjusted P value
1GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
2GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
3GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity3.50E-05
4GO:0050521: alpha-glucan, water dikinase activity3.50E-05
5GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity3.50E-05
6GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity3.50E-05
7GO:0018708: thiol S-methyltransferase activity8.78E-05
8GO:0003844: 1,4-alpha-glucan branching enzyme activity8.78E-05
9GO:0015172: acidic amino acid transmembrane transporter activity8.78E-05
10GO:0016868: intramolecular transferase activity, phosphotransferases8.78E-05
11GO:0033201: alpha-1,4-glucan synthase activity8.78E-05
12GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.78E-05
13GO:0004412: homoserine dehydrogenase activity8.78E-05
14GO:0010277: chlorophyllide a oxygenase [overall] activity1.52E-04
15GO:0043169: cation binding1.52E-04
16GO:0004373: glycogen (starch) synthase activity1.52E-04
17GO:0004072: aspartate kinase activity2.25E-04
18GO:0019201: nucleotide kinase activity2.25E-04
19GO:0015175: neutral amino acid transmembrane transporter activity2.25E-04
20GO:0009011: starch synthase activity3.05E-04
21GO:0004017: adenylate kinase activity5.70E-04
22GO:0004602: glutathione peroxidase activity5.70E-04
23GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.71E-04
24GO:0015386: potassium:proton antiporter activity1.32E-03
25GO:0004535: poly(A)-specific ribonuclease activity1.70E-03
26GO:0015079: potassium ion transmembrane transporter activity2.26E-03
27GO:0016779: nucleotidyltransferase activity2.56E-03
28GO:0008168: methyltransferase activity2.88E-03
29GO:0005249: voltage-gated potassium channel activity3.20E-03
30GO:0016597: amino acid binding4.80E-03
31GO:0050661: NADP binding7.72E-03
32GO:0004185: serine-type carboxypeptidase activity8.41E-03
33GO:0051537: 2 iron, 2 sulfur cluster binding8.88E-03
34GO:0016787: hydrolase activity8.97E-03
35GO:0015293: symporter activity9.12E-03
36GO:0015171: amino acid transmembrane transporter activity1.11E-02
37GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.19E-02
38GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.59E-02
39GO:0005506: iron ion binding1.93E-02
40GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.32E-02
41GO:0016491: oxidoreductase activity2.58E-02
42GO:0005524: ATP binding3.38E-02
43GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.74E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast7.07E-10
2GO:0009570: chloroplast stroma1.60E-07
3GO:0009501: amyloplast1.08E-05
4GO:0009535: chloroplast thylakoid membrane5.36E-05
5GO:0042651: thylakoid membrane8.34E-05
6GO:0008076: voltage-gated potassium channel complex2.25E-04
7GO:0009534: chloroplast thylakoid2.55E-04
8GO:0009941: chloroplast envelope3.01E-04
9GO:0010287: plastoglobule1.35E-03
10GO:0005875: microtubule associated complex1.97E-03
11GO:0010319: stromule4.60E-03
12GO:0009706: chloroplast inner membrane1.33E-02
13GO:0031969: chloroplast membrane3.11E-02
<
Gene type



Gene DE type