co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G06360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
2	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0000819: sister chromatid segregation	0.00E+00
5	GO:0010583: response to cyclopentenone	3.62E-06
6	GO:0000082: G1/S transition of mitotic cell cycle	7.70E-05
7	GO:0006438: valyl-tRNA aminoacylation	1.44E-04
8	GO:0009063: cellular amino acid catabolic process	1.44E-04
9	GO:0048016: inositol phosphate-mediated signaling	1.44E-04
10	GO:0006423: cysteinyl-tRNA aminoacylation	3.29E-04
11	GO:0070981: L-asparagine biosynthetic process	3.29E-04
12	GO:0061062: regulation of nematode larval development	3.29E-04
13	GO:0006529: asparagine biosynthetic process	3.29E-04
14	GO:0000086: G2/M transition of mitotic cell cycle	3.29E-04
15	GO:1901529: positive regulation of anion channel activity	3.29E-04
16	GO:0010226: response to lithium ion	5.40E-04
17	GO:0016045: detection of bacterium	5.40E-04
18	GO:0031145: anaphase-promoting complex-dependent catabolic process	5.40E-04
19	GO:0043617: cellular response to sucrose starvation	5.40E-04
20	GO:0001578: microtubule bundle formation	5.40E-04
21	GO:0030865: cortical cytoskeleton organization	5.40E-04
22	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	5.40E-04
23	GO:0006418: tRNA aminoacylation for protein translation	5.75E-04
24	GO:0016572: histone phosphorylation	7.73E-04
25	GO:0009558: embryo sac cellularization	7.73E-04
26	GO:0010321: regulation of vegetative phase change	7.73E-04
27	GO:0051513: regulation of monopolar cell growth	7.73E-04
28	GO:0030071: regulation of mitotic metaphase/anaphase transition	7.73E-04
29	GO:0007276: gamete generation	7.73E-04
30	GO:0042127: regulation of cell proliferation	8.13E-04
31	GO:0051301: cell division	8.68E-04
32	GO:0042991: transcription factor import into nucleus	1.02E-03
33	GO:0009755: hormone-mediated signaling pathway	1.02E-03
34	GO:0009652: thigmotropism	1.02E-03
35	GO:0051322: anaphase	1.02E-03
36	GO:0051726: regulation of cell cycle	1.06E-03
37	GO:0048497: maintenance of floral organ identity	1.29E-03
38	GO:0032957: inositol trisphosphate metabolic process	1.29E-03
39	GO:0016042: lipid catabolic process	1.37E-03
40	GO:0046855: inositol phosphate dephosphorylation	1.59E-03
41	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.59E-03
42	GO:0000910: cytokinesis	1.68E-03
43	GO:0010067: procambium histogenesis	1.91E-03
44	GO:0010444: guard mother cell differentiation	2.24E-03
45	GO:0000712: resolution of meiotic recombination intermediates	2.24E-03
46	GO:1900056: negative regulation of leaf senescence	2.24E-03
47	GO:0010492: maintenance of shoot apical meristem identity	2.60E-03
48	GO:0010332: response to gamma radiation	3.35E-03
49	GO:0048589: developmental growth	3.35E-03
50	GO:0009744: response to sucrose	3.75E-03
51	GO:0006782: protoporphyrinogen IX biosynthetic process	4.18E-03
52	GO:0009641: shade avoidance	4.18E-03
53	GO:0006949: syncytium formation	4.18E-03
54	GO:0006259: DNA metabolic process	4.18E-03
55	GO:0008285: negative regulation of cell proliferation	4.61E-03
56	GO:0006265: DNA topological change	4.61E-03
57	GO:0009750: response to fructose	4.61E-03
58	GO:0048229: gametophyte development	4.61E-03
59	GO:0046856: phosphatidylinositol dephosphorylation	4.61E-03
60	GO:0009736: cytokinin-activated signaling pathway	5.05E-03
61	GO:0016024: CDP-diacylglycerol biosynthetic process	5.06E-03
62	GO:0010152: pollen maturation	5.06E-03
63	GO:0006312: mitotic recombination	5.06E-03
64	GO:0012501: programmed cell death	5.06E-03
65	GO:0010588: cotyledon vascular tissue pattern formation	5.52E-03
66	GO:0006541: glutamine metabolic process	6.00E-03
67	GO:0007034: vacuolar transport	6.00E-03
68	GO:0009887: animal organ morphogenesis	6.00E-03
69	GO:0009934: regulation of meristem structural organization	6.00E-03
70	GO:0006833: water transport	7.00E-03
71	GO:0006351: transcription, DNA-templated	7.61E-03
72	GO:0019953: sexual reproduction	8.06E-03
73	GO:0010091: trichome branching	1.03E-02
74	GO:0048443: stamen development	1.03E-02
75	GO:0008284: positive regulation of cell proliferation	1.09E-02
76	GO:0000226: microtubule cytoskeleton organization	1.16E-02
77	GO:0034220: ion transmembrane transport	1.16E-02
78	GO:0010051: xylem and phloem pattern formation	1.16E-02
79	GO:0010305: leaf vascular tissue pattern formation	1.22E-02
80	GO:0009741: response to brassinosteroid	1.22E-02
81	GO:0007018: microtubule-based movement	1.28E-02
82	GO:0007059: chromosome segregation	1.28E-02
83	GO:0009646: response to absence of light	1.28E-02
84	GO:0048825: cotyledon development	1.35E-02
85	GO:0009749: response to glucose	1.35E-02
86	GO:0071554: cell wall organization or biogenesis	1.41E-02
87	GO:0006470: protein dephosphorylation	1.42E-02
88	GO:0032502: developmental process	1.48E-02
89	GO:0010468: regulation of gene expression	1.49E-02
90	GO:0009416: response to light stimulus	1.51E-02
91	GO:0030163: protein catabolic process	1.55E-02
92	GO:0019760: glucosinolate metabolic process	1.62E-02
93	GO:0009828: plant-type cell wall loosening	1.62E-02
94	GO:0015995: chlorophyll biosynthetic process	2.06E-02
95	GO:0048573: photoperiodism, flowering	2.06E-02
96	GO:0048366: leaf development	2.27E-02
97	GO:0010311: lateral root formation	2.30E-02
98	GO:0000160: phosphorelay signal transduction system	2.30E-02
99	GO:0030001: metal ion transport	2.88E-02
100	GO:0045892: negative regulation of transcription, DNA-templated	2.91E-02
101	GO:0007165: signal transduction	2.98E-02
102	GO:0008283: cell proliferation	3.15E-02
103	GO:0051707: response to other organism	3.15E-02
104	GO:0000209: protein polyubiquitination	3.23E-02
105	GO:0048364: root development	3.68E-02
106	GO:0009664: plant-type cell wall organization	3.70E-02
107	GO:0042538: hyperosmotic salinity response	3.70E-02
108	GO:0030154: cell differentiation	4.06E-02
109	GO:0048316: seed development	4.48E-02
110	GO:0048367: shoot system development	4.48E-02
111	GO:0009626: plant-type hypersensitive response	4.58E-02
112	GO:0009624: response to nematode	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	6.61E-05
2	GO:0046030: inositol trisphosphate phosphatase activity	1.44E-04
3	GO:0004832: valine-tRNA ligase activity	1.44E-04
4	GO:0052689: carboxylic ester hydrolase activity	1.49E-04
5	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	3.29E-04
6	GO:0004817: cysteine-tRNA ligase activity	3.29E-04
7	GO:0004109: coproporphyrinogen oxidase activity	3.29E-04
8	GO:0003916: DNA topoisomerase activity	7.73E-04
9	GO:0004812: aminoacyl-tRNA ligase activity	8.77E-04
10	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.02E-03
11	GO:0010011: auxin binding	1.02E-03
12	GO:0005515: protein binding	1.39E-03
13	GO:0030332: cyclin binding	1.59E-03
14	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.59E-03
15	GO:0008017: microtubule binding	2.06E-03
16	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.96E-03
17	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	2.96E-03
18	GO:0016788: hydrolase activity, acting on ester bonds	3.47E-03
19	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.61E-03
20	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.06E-03
21	GO:0016298: lipase activity	5.22E-03
22	GO:0004565: beta-galactosidase activity	5.52E-03
23	GO:0003725: double-stranded RNA binding	5.52E-03
24	GO:0003777: microtubule motor activity	5.59E-03
25	GO:0042803: protein homodimerization activity	5.93E-03
26	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.00E-03
27	GO:0003712: transcription cofactor activity	6.50E-03
28	GO:0004190: aspartic-type endopeptidase activity	6.50E-03
29	GO:0003779: actin binding	6.97E-03
30	GO:0005524: ATP binding	7.27E-03
31	GO:0004707: MAP kinase activity	8.61E-03
32	GO:0008094: DNA-dependent ATPase activity	8.61E-03
33	GO:0030570: pectate lyase activity	9.75E-03
34	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.02E-02
35	GO:0001085: RNA polymerase II transcription factor binding	1.22E-02
36	GO:0016853: isomerase activity	1.28E-02
37	GO:0000156: phosphorelay response regulator activity	1.55E-02
38	GO:0051015: actin filament binding	1.55E-02
39	GO:0016791: phosphatase activity	1.62E-02
40	GO:0016413: O-acetyltransferase activity	1.76E-02
41	GO:0004672: protein kinase activity	1.78E-02
42	GO:0015250: water channel activity	1.84E-02
43	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.38E-02
44	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.46E-02
45	GO:0004722: protein serine/threonine phosphatase activity	3.14E-02
46	GO:0031625: ubiquitin protein ligase binding	4.18E-02
47	GO:0043565: sequence-specific DNA binding	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0005874: microtubule	7.58E-04
3	GO:0005828: kinetochore microtubule	1.02E-03
4	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.02E-03
5	GO:0009524: phragmoplast	1.39E-03
6	GO:0000793: condensed chromosome	1.59E-03
7	GO:0000815: ESCRT III complex	1.91E-03
8	GO:0000794: condensed nuclear chromosome	2.24E-03
9	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	2.96E-03
10	GO:0005819: spindle	3.18E-03
11	GO:0000922: spindle pole	3.35E-03
12	GO:0005884: actin filament	4.61E-03
13	GO:0009574: preprophase band	5.52E-03
14	GO:0005871: kinesin complex	1.09E-02
15	GO:0046658: anchored component of plasma membrane	1.65E-02
16	GO:0005667: transcription factor complex	1.99E-02
17	GO:0005634: nucleus	2.43E-02
18	GO:0031225: anchored component of membrane	2.65E-02
19	GO:0005856: cytoskeleton	3.42E-02