co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G06180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006511: ubiquitin-dependent protein catabolic process	6.11E-07
2	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.51E-06
3	GO:0006695: cholesterol biosynthetic process	6.72E-05
4	GO:0010372: positive regulation of gibberellin biosynthetic process	6.72E-05
5	GO:0030433: ubiquitin-dependent ERAD pathway	6.90E-05
6	GO:0043617: cellular response to sucrose starvation	1.18E-04
7	GO:0090630: activation of GTPase activity	1.18E-04
8	GO:0005513: detection of calcium ion	3.07E-04
9	GO:0043248: proteasome assembly	3.78E-04
10	GO:0010189: vitamin E biosynthetic process	4.53E-04
11	GO:0010555: response to mannitol	4.53E-04
12	GO:0051603: proteolysis involved in cellular protein catabolic process	6.05E-04
13	GO:0006402: mRNA catabolic process	6.10E-04
14	GO:0010099: regulation of photomorphogenesis	6.94E-04
15	GO:0046685: response to arsenic-containing substance	7.80E-04
16	GO:0005982: starch metabolic process	8.68E-04
17	GO:0016925: protein sumoylation	1.15E-03
18	GO:0005986: sucrose biosynthetic process	1.25E-03
19	GO:0034605: cellular response to heat	1.35E-03
20	GO:0005985: sucrose metabolic process	1.45E-03
21	GO:0000162: tryptophan biosynthetic process	1.56E-03
22	GO:0006406: mRNA export from nucleus	1.67E-03
23	GO:0010431: seed maturation	1.90E-03
24	GO:0010227: floral organ abscission	2.14E-03
25	GO:0019722: calcium-mediated signaling	2.26E-03
26	GO:0009306: protein secretion	2.26E-03
27	GO:0051028: mRNA transport	2.39E-03
28	GO:0009646: response to absence of light	2.78E-03
29	GO:0016132: brassinosteroid biosynthetic process	3.05E-03
30	GO:0031047: gene silencing by RNA	3.19E-03
31	GO:0030163: protein catabolic process	3.33E-03
32	GO:1901657: glycosyl compound metabolic process	3.33E-03
33	GO:0016579: protein deubiquitination	3.76E-03
34	GO:0016126: sterol biosynthetic process	3.91E-03
35	GO:0010411: xyloglucan metabolic process	4.37E-03
36	GO:0000724: double-strand break repair via homologous recombination	5.35E-03
37	GO:0009744: response to sucrose	6.57E-03
38	GO:0042546: cell wall biogenesis	6.75E-03
39	GO:0071555: cell wall organization	1.37E-02
40	GO:0007166: cell surface receptor signaling pathway	1.67E-02
41	GO:0015031: protein transport	1.74E-02
42	GO:0009826: unidimensional cell growth	2.02E-02
43	GO:0005975: carbohydrate metabolic process	2.08E-02
44	GO:0016192: vesicle-mediated transport	2.51E-02
45	GO:0006886: intracellular protein transport	2.81E-02
46	GO:0006397: mRNA processing	3.29E-02

Rank	GO Term	Adjusted P value
1	GO:0009918: sterol delta7 reductase activity	0.00E+00
2	GO:0047598: 7-dehydrocholesterol reductase activity	0.00E+00
3	GO:0004298: threonine-type endopeptidase activity	6.62E-07
4	GO:0036402: proteasome-activating ATPase activity	2.51E-06
5	GO:0017025: TBP-class protein binding	3.84E-05
6	GO:0004848: ureidoglycolate hydrolase activity	1.18E-04
7	GO:0004557: alpha-galactosidase activity	1.18E-04
8	GO:0052692: raffinose alpha-galactosidase activity	1.18E-04
9	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	1.18E-04
10	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.76E-04
11	GO:0004834: tryptophan synthase activity	2.39E-04
12	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.42E-04
13	GO:0008233: peptidase activity	2.60E-04
14	GO:0031386: protein tag	3.07E-04
15	GO:0016157: sucrose synthase activity	4.53E-04
16	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	9.59E-04
17	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.90E-03
18	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.05E-03
19	GO:0004843: thiol-dependent ubiquitin-specific protease activity	3.05E-03
20	GO:0004518: nuclease activity	3.19E-03
21	GO:0102483: scopolin beta-glucosidase activity	4.37E-03
22	GO:0005096: GTPase activator activity	4.85E-03
23	GO:0008422: beta-glucosidase activity	5.86E-03
24	GO:0016887: ATPase activity	5.89E-03
25	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	8.08E-03
26	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.89E-03
27	GO:0005509: calcium ion binding	1.26E-02
28	GO:0008565: protein transporter activity	1.38E-02
29	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
30	GO:0008194: UDP-glycosyltransferase activity	1.65E-02
31	GO:0003924: GTPase activity	3.19E-02
32	GO:0000166: nucleotide binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	7.62E-11
2	GO:0005839: proteasome core complex	6.62E-07
3	GO:0031597: cytosolic proteasome complex	3.68E-06
4	GO:0031595: nuclear proteasome complex	5.12E-06
5	GO:0008540: proteasome regulatory particle, base subcomplex	1.41E-05
6	GO:0016442: RISC complex	2.64E-05
7	GO:0030117: membrane coat	2.39E-04
8	GO:0005635: nuclear envelope	6.25E-04
9	GO:0019773: proteasome core complex, alpha-subunit complex	6.94E-04
10	GO:0010494: cytoplasmic stress granule	7.80E-04
11	GO:0030665: clathrin-coated vesicle membrane	8.68E-04
12	GO:0030125: clathrin vesicle coat	9.59E-04
13	GO:0008541: proteasome regulatory particle, lid subcomplex	1.05E-03
14	GO:0048471: perinuclear region of cytoplasm	1.05E-03
15	GO:0005665: DNA-directed RNA polymerase II, core complex	1.15E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	1.45E-03
17	GO:0000419: DNA-directed RNA polymerase V complex	1.56E-03
18	GO:0005829: cytosol	2.44E-03
19	GO:0000932: P-body	3.91E-03
20	GO:0005643: nuclear pore	4.69E-03
21	GO:0005834: heterotrimeric G-protein complex	9.50E-03
22	GO:0009706: chloroplast inner membrane	1.03E-02
23	GO:0048046: apoplast	1.11E-02
24	GO:0005618: cell wall	1.24E-02
25	GO:0005759: mitochondrial matrix	1.42E-02
26	GO:0005886: plasma membrane	1.77E-02
27	GO:0031969: chloroplast membrane	2.42E-02