GO Enrichment Analysis of Co-expressed Genes with
AT1G05520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 2 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0000710: meiotic mismatch repair | 0.00E+00 |
| 4 | GO:0006294: nucleotide-excision repair, preincision complex assembly | 0.00E+00 |
| 5 | GO:0070914: UV-damage excision repair | 0.00E+00 |
| 6 | GO:0046680: response to DDT | 0.00E+00 |
| 7 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 8 | GO:0030163: protein catabolic process | 2.56E-05 |
| 9 | GO:0010213: non-photoreactive DNA repair | 7.07E-05 |
| 10 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 7.07E-05 |
| 11 | GO:0000032: cell wall mannoprotein biosynthetic process | 7.07E-05 |
| 12 | GO:0046939: nucleotide phosphorylation | 1.70E-04 |
| 13 | GO:0009805: coumarin biosynthetic process | 1.70E-04 |
| 14 | GO:0080026: response to indolebutyric acid | 1.70E-04 |
| 15 | GO:0009062: fatty acid catabolic process | 2.86E-04 |
| 16 | GO:0033591: response to L-ascorbic acid | 2.86E-04 |
| 17 | GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion | 2.86E-04 |
| 18 | GO:0080024: indolebutyric acid metabolic process | 4.15E-04 |
| 19 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 4.15E-04 |
| 20 | GO:0009298: GDP-mannose biosynthetic process | 4.15E-04 |
| 21 | GO:0009058: biosynthetic process | 4.21E-04 |
| 22 | GO:0009646: response to absence of light | 4.36E-04 |
| 23 | GO:0010222: stem vascular tissue pattern formation | 5.53E-04 |
| 24 | GO:0098719: sodium ion import across plasma membrane | 7.00E-04 |
| 25 | GO:0006461: protein complex assembly | 7.00E-04 |
| 26 | GO:0006555: methionine metabolic process | 8.57E-04 |
| 27 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.02E-03 |
| 28 | GO:0000338: protein deneddylation | 1.19E-03 |
| 29 | GO:0006099: tricarboxylic acid cycle | 1.20E-03 |
| 30 | GO:0006102: isocitrate metabolic process | 1.37E-03 |
| 31 | GO:0006972: hyperosmotic response | 1.56E-03 |
| 32 | GO:0009699: phenylpropanoid biosynthetic process | 1.56E-03 |
| 33 | GO:0006002: fructose 6-phosphate metabolic process | 1.56E-03 |
| 34 | GO:0009821: alkaloid biosynthetic process | 1.76E-03 |
| 35 | GO:0046685: response to arsenic-containing substance | 1.76E-03 |
| 36 | GO:0010332: response to gamma radiation | 1.76E-03 |
| 37 | GO:0051453: regulation of intracellular pH | 1.97E-03 |
| 38 | GO:0009751: response to salicylic acid | 2.12E-03 |
| 39 | GO:0043069: negative regulation of programmed cell death | 2.19E-03 |
| 40 | GO:0006096: glycolytic process | 2.31E-03 |
| 41 | GO:0006790: sulfur compound metabolic process | 2.64E-03 |
| 42 | GO:0006312: mitotic recombination | 2.64E-03 |
| 43 | GO:0006807: nitrogen compound metabolic process | 2.88E-03 |
| 44 | GO:0019853: L-ascorbic acid biosynthetic process | 3.37E-03 |
| 45 | GO:0046854: phosphatidylinositol phosphorylation | 3.37E-03 |
| 46 | GO:0010053: root epidermal cell differentiation | 3.37E-03 |
| 47 | GO:0034976: response to endoplasmic reticulum stress | 3.63E-03 |
| 48 | GO:0006338: chromatin remodeling | 3.89E-03 |
| 49 | GO:0015992: proton transport | 4.44E-03 |
| 50 | GO:0007005: mitochondrion organization | 4.73E-03 |
| 51 | GO:0019748: secondary metabolic process | 4.73E-03 |
| 52 | GO:0006284: base-excision repair | 5.32E-03 |
| 53 | GO:0042147: retrograde transport, endosome to Golgi | 5.62E-03 |
| 54 | GO:0045489: pectin biosynthetic process | 6.24E-03 |
| 55 | GO:0006814: sodium ion transport | 6.56E-03 |
| 56 | GO:0006511: ubiquitin-dependent protein catabolic process | 6.57E-03 |
| 57 | GO:0006623: protein targeting to vacuole | 6.89E-03 |
| 58 | GO:0006635: fatty acid beta-oxidation | 7.22E-03 |
| 59 | GO:0006464: cellular protein modification process | 8.25E-03 |
| 60 | GO:0019760: glucosinolate metabolic process | 8.25E-03 |
| 61 | GO:0071805: potassium ion transmembrane transport | 8.61E-03 |
| 62 | GO:0009615: response to virus | 9.34E-03 |
| 63 | GO:0009627: systemic acquired resistance | 1.01E-02 |
| 64 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.05E-02 |
| 65 | GO:0048767: root hair elongation | 1.17E-02 |
| 66 | GO:0006499: N-terminal protein myristoylation | 1.21E-02 |
| 67 | GO:0009407: toxin catabolic process | 1.21E-02 |
| 68 | GO:0010043: response to zinc ion | 1.25E-02 |
| 69 | GO:0007568: aging | 1.25E-02 |
| 70 | GO:0000724: double-strand break repair via homologous recombination | 1.29E-02 |
| 71 | GO:0045087: innate immune response | 1.33E-02 |
| 72 | GO:0016051: carbohydrate biosynthetic process | 1.33E-02 |
| 73 | GO:0009744: response to sucrose | 1.59E-02 |
| 74 | GO:0009640: photomorphogenesis | 1.59E-02 |
| 75 | GO:0009636: response to toxic substance | 1.73E-02 |
| 76 | GO:0031347: regulation of defense response | 1.82E-02 |
| 77 | GO:0046686: response to cadmium ion | 1.91E-02 |
| 78 | GO:0006486: protein glycosylation | 1.97E-02 |
| 79 | GO:0009585: red, far-red light phototransduction | 1.97E-02 |
| 80 | GO:0010224: response to UV-B | 2.01E-02 |
| 81 | GO:0009620: response to fungus | 2.37E-02 |
| 82 | GO:0016569: covalent chromatin modification | 2.42E-02 |
| 83 | GO:0009739: response to gibberellin | 4.04E-02 |
| 84 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.04E-02 |
| 85 | GO:0007166: cell surface receptor signaling pathway | 4.10E-02 |
| 86 | GO:0009617: response to bacterium | 4.23E-02 |
| 87 | GO:0042742: defense response to bacterium | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 3 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 4 | GO:0048037: cofactor binding | 7.07E-05 |
| 5 | GO:0004476: mannose-6-phosphate isomerase activity | 7.07E-05 |
| 6 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.70E-04 |
| 7 | GO:0010297: heteropolysaccharide binding | 1.70E-04 |
| 8 | GO:0008805: carbon-monoxide oxygenase activity | 1.70E-04 |
| 9 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.70E-04 |
| 10 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 1.70E-04 |
| 11 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 2.86E-04 |
| 12 | GO:0017108: 5'-flap endonuclease activity | 2.86E-04 |
| 13 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.86E-04 |
| 14 | GO:0000014: single-stranded DNA endodeoxyribonuclease activity | 4.15E-04 |
| 15 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 4.15E-04 |
| 16 | GO:0019201: nucleotide kinase activity | 4.15E-04 |
| 17 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 4.15E-04 |
| 18 | GO:0070628: proteasome binding | 5.53E-04 |
| 19 | GO:0004040: amidase activity | 7.00E-04 |
| 20 | GO:0031593: polyubiquitin binding | 8.57E-04 |
| 21 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 8.57E-04 |
| 22 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 8.57E-04 |
| 23 | GO:0035252: UDP-xylosyltransferase activity | 8.57E-04 |
| 24 | GO:0004017: adenylate kinase activity | 1.02E-03 |
| 25 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.02E-03 |
| 26 | GO:0003872: 6-phosphofructokinase activity | 1.19E-03 |
| 27 | GO:0030955: potassium ion binding | 1.97E-03 |
| 28 | GO:0016844: strictosidine synthase activity | 1.97E-03 |
| 29 | GO:0004743: pyruvate kinase activity | 1.97E-03 |
| 30 | GO:0015386: potassium:proton antiporter activity | 2.41E-03 |
| 31 | GO:0004190: aspartic-type endopeptidase activity | 3.37E-03 |
| 32 | GO:0004298: threonine-type endopeptidase activity | 4.44E-03 |
| 33 | GO:0004176: ATP-dependent peptidase activity | 4.44E-03 |
| 34 | GO:0003756: protein disulfide isomerase activity | 5.32E-03 |
| 35 | GO:0004402: histone acetyltransferase activity | 5.93E-03 |
| 36 | GO:0015385: sodium:proton antiporter activity | 7.90E-03 |
| 37 | GO:0003684: damaged DNA binding | 8.25E-03 |
| 38 | GO:0008237: metallopeptidase activity | 8.61E-03 |
| 39 | GO:0051213: dioxygenase activity | 9.34E-03 |
| 40 | GO:0008375: acetylglucosaminyltransferase activity | 1.01E-02 |
| 41 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 42 | GO:0003824: catalytic activity | 1.23E-02 |
| 43 | GO:0003746: translation elongation factor activity | 1.33E-02 |
| 44 | GO:0003697: single-stranded DNA binding | 1.33E-02 |
| 45 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.33E-02 |
| 46 | GO:0004364: glutathione transferase activity | 1.55E-02 |
| 47 | GO:0016298: lipase activity | 2.01E-02 |
| 48 | GO:0022857: transmembrane transporter activity | 2.42E-02 |
| 49 | GO:0030170: pyridoxal phosphate binding | 3.19E-02 |
| 50 | GO:0004252: serine-type endopeptidase activity | 3.19E-02 |
| 51 | GO:0008565: protein transporter activity | 3.37E-02 |
| 52 | GO:0005507: copper ion binding | 3.42E-02 |
| 53 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.55E-02 |
| 54 | GO:0005525: GTP binding | 3.94E-02 |
| 55 | GO:0046872: metal ion binding | 4.26E-02 |
| 56 | GO:0005509: calcium ion binding | 4.47E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070522: ERCC4-ERCC1 complex | 0.00E+00 |
| 2 | GO:0000110: nucleotide-excision repair factor 1 complex | 7.07E-05 |
| 3 | GO:0005794: Golgi apparatus | 1.11E-04 |
| 4 | GO:0005839: proteasome core complex | 2.46E-04 |
| 5 | GO:0005768: endosome | 3.86E-04 |
| 6 | GO:0005945: 6-phosphofructokinase complex | 7.00E-04 |
| 7 | GO:0030904: retromer complex | 8.57E-04 |
| 8 | GO:0031902: late endosome membrane | 1.36E-03 |
| 9 | GO:0031982: vesicle | 1.37E-03 |
| 10 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.56E-03 |
| 11 | GO:0005802: trans-Golgi network | 1.61E-03 |
| 12 | GO:0008180: COP9 signalosome | 1.76E-03 |
| 13 | GO:0005829: cytosol | 1.77E-03 |
| 14 | GO:0000502: proteasome complex | 1.96E-03 |
| 15 | GO:0030665: clathrin-coated vesicle membrane | 1.97E-03 |
| 16 | GO:0017119: Golgi transport complex | 2.19E-03 |
| 17 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.41E-03 |
| 18 | GO:0016592: mediator complex | 7.56E-03 |
| 19 | GO:0032580: Golgi cisterna membrane | 8.25E-03 |
| 20 | GO:0005788: endoplasmic reticulum lumen | 9.71E-03 |
| 21 | GO:0005886: plasma membrane | 1.38E-02 |
| 22 | GO:0005783: endoplasmic reticulum | 1.39E-02 |
| 23 | GO:0016021: integral component of membrane | 1.56E-02 |
| 24 | GO:0010008: endosome membrane | 2.26E-02 |
| 25 | GO:0005623: cell | 3.02E-02 |
| 26 | GO:0005759: mitochondrial matrix | 3.49E-02 |
| 27 | GO:0005622: intracellular | 4.25E-02 |