co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:1902001: fatty acid transmembrane transport	0.00E+00
3	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
4	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
5	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
6	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
7	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
8	GO:0046865: terpenoid transport	0.00E+00
9	GO:0018063: cytochrome c-heme linkage	0.00E+00
10	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
11	GO:1902009: positive regulation of toxin transport	0.00E+00
12	GO:0051553: flavone biosynthetic process	0.00E+00
13	GO:1900057: positive regulation of leaf senescence	4.66E-06
14	GO:0051707: response to other organism	1.69E-05
15	GO:0051607: defense response to virus	4.56E-05
16	GO:0042742: defense response to bacterium	9.93E-05
17	GO:0015031: protein transport	2.08E-04
18	GO:0006605: protein targeting	2.83E-04
19	GO:0032107: regulation of response to nutrient levels	2.87E-04
20	GO:0033306: phytol metabolic process	2.87E-04
21	GO:0034214: protein hexamerization	2.87E-04
22	GO:0046246: terpene biosynthetic process	2.87E-04
23	GO:0006680: glucosylceramide catabolic process	2.87E-04
24	GO:0006083: acetate metabolic process	2.87E-04
25	GO:0009751: response to salicylic acid	3.46E-04
26	GO:0010193: response to ozone	3.57E-04
27	GO:0010112: regulation of systemic acquired resistance	4.20E-04
28	GO:0008152: metabolic process	4.37E-04
29	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.30E-04
30	GO:0009838: abscission	6.30E-04
31	GO:0006024: glycosaminoglycan biosynthetic process	6.30E-04
32	GO:0055088: lipid homeostasis	6.30E-04
33	GO:0050684: regulation of mRNA processing	6.30E-04
34	GO:0015908: fatty acid transport	6.30E-04
35	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	6.30E-04
36	GO:0015012: heparan sulfate proteoglycan biosynthetic process	6.30E-04
37	GO:0071668: plant-type cell wall assembly	6.30E-04
38	GO:0010476: gibberellin mediated signaling pathway	1.02E-03
39	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.02E-03
40	GO:0009410: response to xenobiotic stimulus	1.02E-03
41	GO:0015692: lead ion transport	1.02E-03
42	GO:0002230: positive regulation of defense response to virus by host	1.02E-03
43	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.02E-03
44	GO:0080168: abscisic acid transport	1.02E-03
45	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.02E-03
46	GO:0032784: regulation of DNA-templated transcription, elongation	1.02E-03
47	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.02E-03
48	GO:0006631: fatty acid metabolic process	1.34E-03
49	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.46E-03
50	GO:0070301: cellular response to hydrogen peroxide	1.46E-03
51	GO:0002239: response to oomycetes	1.46E-03
52	GO:0071323: cellular response to chitin	1.46E-03
53	GO:1902290: positive regulation of defense response to oomycetes	1.46E-03
54	GO:0080024: indolebutyric acid metabolic process	1.46E-03
55	GO:0055070: copper ion homeostasis	1.46E-03
56	GO:0001676: long-chain fatty acid metabolic process	1.46E-03
57	GO:0007166: cell surface receptor signaling pathway	1.61E-03
58	GO:0009636: response to toxic substance	1.72E-03
59	GO:0009617: response to bacterium	1.72E-03
60	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.96E-03
61	GO:0006621: protein retention in ER lumen	1.96E-03
62	GO:1901002: positive regulation of response to salt stress	1.96E-03
63	GO:0015867: ATP transport	1.96E-03
64	GO:0009229: thiamine diphosphate biosynthetic process	2.50E-03
65	GO:0006623: protein targeting to vacuole	3.04E-03
66	GO:0015866: ADP transport	3.08E-03
67	GO:0010256: endomembrane system organization	3.08E-03
68	GO:0009228: thiamine biosynthetic process	3.08E-03
69	GO:1900425: negative regulation of defense response to bacterium	3.08E-03
70	GO:0009759: indole glucosinolate biosynthetic process	3.08E-03
71	GO:0002229: defense response to oomycetes	3.26E-03
72	GO:0006891: intra-Golgi vesicle-mediated transport	3.26E-03
73	GO:0048444: floral organ morphogenesis	3.71E-03
74	GO:0030643: cellular phosphate ion homeostasis	3.71E-03
75	GO:0010044: response to aluminum ion	4.38E-03
76	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.38E-03
77	GO:1900056: negative regulation of leaf senescence	4.38E-03
78	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.38E-03
79	GO:1902074: response to salt	4.38E-03
80	GO:0009611: response to wounding	4.41E-03
81	GO:0006886: intracellular protein transport	4.91E-03
82	GO:0006102: isocitrate metabolic process	5.08E-03
83	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.08E-03
84	GO:0009819: drought recovery	5.08E-03
85	GO:0009850: auxin metabolic process	5.08E-03
86	GO:0017004: cytochrome complex assembly	5.82E-03
87	GO:0010208: pollen wall assembly	5.82E-03
88	GO:0010120: camalexin biosynthetic process	5.82E-03
89	GO:0006997: nucleus organization	5.82E-03
90	GO:0010204: defense response signaling pathway, resistance gene-independent	5.82E-03
91	GO:0016311: dephosphorylation	5.83E-03
92	GO:0009813: flavonoid biosynthetic process	6.45E-03
93	GO:0009056: catabolic process	6.60E-03
94	GO:0007338: single fertilization	6.60E-03
95	GO:0019432: triglyceride biosynthetic process	6.60E-03
96	GO:0010150: leaf senescence	6.82E-03
97	GO:1900426: positive regulation of defense response to bacterium	7.41E-03
98	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.41E-03
99	GO:0008202: steroid metabolic process	7.41E-03
100	GO:0006099: tricarboxylic acid cycle	8.14E-03
101	GO:0010629: negative regulation of gene expression	8.26E-03
102	GO:0051555: flavonol biosynthetic process	8.26E-03
103	GO:0019538: protein metabolic process	8.26E-03
104	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.26E-03
105	GO:0009684: indoleacetic acid biosynthetic process	9.14E-03
106	GO:0019684: photosynthesis, light reaction	9.14E-03
107	GO:0042542: response to hydrogen peroxide	9.65E-03
108	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.01E-02
109	GO:0071365: cellular response to auxin stimulus	1.01E-02
110	GO:2000012: regulation of auxin polar transport	1.10E-02
111	GO:0010102: lateral root morphogenesis	1.10E-02
112	GO:0006855: drug transmembrane transport	1.17E-02
113	GO:0002237: response to molecule of bacterial origin	1.20E-02
114	GO:0090351: seedling development	1.30E-02
115	GO:0006970: response to osmotic stress	1.31E-02
116	GO:0000162: tryptophan biosynthetic process	1.40E-02
117	GO:0006979: response to oxidative stress	1.47E-02
118	GO:0009863: salicylic acid mediated signaling pathway	1.51E-02
119	GO:0030150: protein import into mitochondrial matrix	1.51E-02
120	GO:0080147: root hair cell development	1.51E-02
121	GO:0006508: proteolysis	1.56E-02
122	GO:0051302: regulation of cell division	1.62E-02
123	GO:0006874: cellular calcium ion homeostasis	1.62E-02
124	GO:0007275: multicellular organism development	1.69E-02
125	GO:0009269: response to desiccation	1.73E-02
126	GO:0016114: terpenoid biosynthetic process	1.73E-02
127	GO:0009620: response to fungus	1.77E-02
128	GO:0031348: negative regulation of defense response	1.85E-02
129	GO:0071456: cellular response to hypoxia	1.85E-02
130	GO:0009814: defense response, incompatible interaction	1.85E-02
131	GO:0016226: iron-sulfur cluster assembly	1.85E-02
132	GO:0030433: ubiquitin-dependent ERAD pathway	1.85E-02
133	GO:0009651: response to salt stress	1.88E-02
134	GO:0006012: galactose metabolic process	1.96E-02
135	GO:0006468: protein phosphorylation	2.21E-02
136	GO:0042147: retrograde transport, endosome to Golgi	2.21E-02
137	GO:0006520: cellular amino acid metabolic process	2.46E-02
138	GO:0009753: response to jasmonic acid	2.79E-02
139	GO:0071554: cell wall organization or biogenesis	2.86E-02
140	GO:0000302: response to reactive oxygen species	2.86E-02
141	GO:0006635: fatty acid beta-oxidation	2.86E-02
142	GO:0009567: double fertilization forming a zygote and endosperm	3.28E-02
143	GO:0006464: cellular protein modification process	3.28E-02
144	GO:0010029: regulation of seed germination	3.86E-02
145	GO:0009816: defense response to bacterium, incompatible interaction	3.86E-02
146	GO:0009627: systemic acquired resistance	4.02E-02
147	GO:0009414: response to water deprivation	4.18E-02
148	GO:0009817: defense response to fungus, incompatible interaction	4.49E-02
149	GO:0009407: toxin catabolic process	4.81E-02
150	GO:0007568: aging	4.97E-02
151	GO:0048527: lateral root development	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
3	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0005046: KDEL sequence binding	0.00E+00
6	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
7	GO:0010178: IAA-amino acid conjugate hydrolase activity	3.03E-05
8	GO:0102391: decanoate--CoA ligase activity	1.71E-04
9	GO:0004467: long-chain fatty acid-CoA ligase activity	2.24E-04
10	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.83E-04
11	GO:0016229: steroid dehydrogenase activity	2.87E-04
12	GO:0010179: IAA-Ala conjugate hydrolase activity	2.87E-04
13	GO:2001227: quercitrin binding	2.87E-04
14	GO:0003987: acetate-CoA ligase activity	2.87E-04
15	GO:0070401: NADP+ binding	2.87E-04
16	GO:0004348: glucosylceramidase activity	2.87E-04
17	GO:2001147: camalexin binding	2.87E-04
18	GO:0015245: fatty acid transporter activity	2.87E-04
19	GO:0016920: pyroglutamyl-peptidase activity	2.87E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.87E-04
21	GO:0008237: metallopeptidase activity	4.97E-04
22	GO:0010331: gibberellin binding	6.30E-04
23	GO:0032934: sterol binding	6.30E-04
24	GO:0050736: O-malonyltransferase activity	6.30E-04
25	GO:0015036: disulfide oxidoreductase activity	6.30E-04
26	GO:0030247: polysaccharide binding	7.09E-04
27	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.02E-03
28	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.02E-03
29	GO:0032403: protein complex binding	1.02E-03
30	GO:0001046: core promoter sequence-specific DNA binding	1.34E-03
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.46E-03
32	GO:0035529: NADH pyrophosphatase activity	1.46E-03
33	GO:0008106: alcohol dehydrogenase (NADP+) activity	1.46E-03
34	GO:0008194: UDP-glycosyltransferase activity	1.56E-03
35	GO:0035251: UDP-glucosyltransferase activity	1.62E-03
36	GO:0016740: transferase activity	1.67E-03
37	GO:0004834: tryptophan synthase activity	1.96E-03
38	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.96E-03
39	GO:0046923: ER retention sequence binding	1.96E-03
40	GO:0018685: alkane 1-monooxygenase activity	2.50E-03
41	GO:0047631: ADP-ribose diphosphatase activity	2.50E-03
42	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.03E-03
43	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.03E-03
44	GO:0000210: NAD+ diphosphatase activity	3.08E-03
45	GO:0016208: AMP binding	3.08E-03
46	GO:0015217: ADP transmembrane transporter activity	3.71E-03
47	GO:0003978: UDP-glucose 4-epimerase activity	3.71E-03
48	GO:0004144: diacylglycerol O-acyltransferase activity	3.71E-03
49	GO:0005347: ATP transmembrane transporter activity	3.71E-03
50	GO:0004656: procollagen-proline 4-dioxygenase activity	3.71E-03
51	GO:0008483: transaminase activity	4.19E-03
52	GO:0016758: transferase activity, transferring hexosyl groups	4.37E-03
53	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.38E-03
54	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.38E-03
55	GO:0008320: protein transmembrane transporter activity	4.38E-03
56	GO:0043295: glutathione binding	4.38E-03
57	GO:0042803: protein homodimerization activity	5.02E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	5.08E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	5.08E-03
60	GO:0004806: triglyceride lipase activity	5.54E-03
61	GO:0008142: oxysterol binding	5.82E-03
62	GO:0004630: phospholipase D activity	5.82E-03
63	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.82E-03
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.23E-03
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.78E-03
66	GO:0003993: acid phosphatase activity	8.14E-03
67	GO:0004864: protein phosphatase inhibitor activity	8.26E-03
68	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.01E-02
69	GO:0005198: structural molecule activity	1.13E-02
70	GO:0005509: calcium ion binding	1.26E-02
71	GO:0008061: chitin binding	1.30E-02
72	GO:0003712: transcription cofactor activity	1.30E-02
73	GO:0005217: intracellular ligand-gated ion channel activity	1.30E-02
74	GO:0004970: ionotropic glutamate receptor activity	1.30E-02
75	GO:0051536: iron-sulfur cluster binding	1.51E-02
76	GO:0005215: transporter activity	1.72E-02
77	GO:0016757: transferase activity, transferring glycosyl groups	1.93E-02
78	GO:0008810: cellulase activity	1.96E-02
79	GO:0003727: single-stranded RNA binding	2.08E-02
80	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.08E-02
81	GO:0004722: protein serine/threonine phosphatase activity	2.21E-02
82	GO:0010181: FMN binding	2.59E-02
83	GO:0004872: receptor activity	2.72E-02
84	GO:0005524: ATP binding	3.00E-02
85	GO:0015297: antiporter activity	3.20E-02
86	GO:0016791: phosphatase activity	3.28E-02
87	GO:0016413: O-acetyltransferase activity	3.57E-02
88	GO:0016301: kinase activity	3.58E-02
89	GO:0051213: dioxygenase activity	3.72E-02
90	GO:0004674: protein serine/threonine kinase activity	4.08E-02
91	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.25E-02
92	GO:0005096: GTPase activator activity	4.65E-02
93	GO:0015238: drug transmembrane transporter activity	4.65E-02
94	GO:0046872: metal ion binding	4.86E-02
95	GO:0050897: cobalt ion binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	2.13E-06
2	GO:0017119: Golgi transport complex	2.50E-05
3	GO:0016021: integral component of membrane	1.13E-04
4	GO:0005801: cis-Golgi network	1.71E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	2.87E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	6.30E-04
7	GO:0030134: ER to Golgi transport vesicle	6.30E-04
8	GO:0005743: mitochondrial inner membrane	1.36E-03
9	GO:0030658: transport vesicle membrane	1.46E-03
10	GO:0000813: ESCRT I complex	2.50E-03
11	GO:0000164: protein phosphatase type 1 complex	2.50E-03
12	GO:0005802: trans-Golgi network	2.87E-03
13	GO:0031965: nuclear membrane	3.04E-03
14	GO:0005783: endoplasmic reticulum	3.15E-03
15	GO:0005789: endoplasmic reticulum membrane	3.50E-03
16	GO:0009986: cell surface	4.38E-03
17	GO:0005623: cell	4.68E-03
18	GO:0005788: endoplasmic reticulum lumen	4.97E-03
19	GO:0005886: plasma membrane	5.30E-03
20	GO:0009514: glyoxysome	5.82E-03
21	GO:0005779: integral component of peroxisomal membrane	5.82E-03
22	GO:0030665: clathrin-coated vesicle membrane	7.41E-03
23	GO:0046658: anchored component of plasma membrane	9.75E-03
24	GO:0005768: endosome	1.21E-02
25	GO:0031410: cytoplasmic vesicle	1.85E-02
26	GO:0005774: vacuolar membrane	2.00E-02
27	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.08E-02
28	GO:0019898: extrinsic component of membrane	2.72E-02
29	GO:0009504: cell plate	2.72E-02
30	GO:0043231: intracellular membrane-bounded organelle	2.89E-02
31	GO:0009705: plant-type vacuole membrane	3.35E-02
32	GO:0009506: plasmodesma	3.86E-02
33	GO:0000151: ubiquitin ligase complex	4.49E-02
34	GO:0005773: vacuole	4.73E-02
35	GO:0000325: plant-type vacuole	4.97E-02