GO Enrichment Analysis of Co-expressed Genes with
AT1G04760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 3 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 4 | GO:0006066: alcohol metabolic process | 0.00E+00 |
| 5 | GO:0010028: xanthophyll cycle | 4.60E-05 |
| 6 | GO:0034337: RNA folding | 4.60E-05 |
| 7 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 4.60E-05 |
| 8 | GO:0009090: homoserine biosynthetic process | 4.60E-05 |
| 9 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 4.60E-05 |
| 10 | GO:0016122: xanthophyll metabolic process | 1.13E-04 |
| 11 | GO:0016121: carotene catabolic process | 1.13E-04 |
| 12 | GO:0016124: xanthophyll catabolic process | 1.13E-04 |
| 13 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 1.95E-04 |
| 14 | GO:0006696: ergosterol biosynthetic process | 1.95E-04 |
| 15 | GO:0009067: aspartate family amino acid biosynthetic process | 2.85E-04 |
| 16 | GO:0045338: farnesyl diphosphate metabolic process | 2.85E-04 |
| 17 | GO:0010601: positive regulation of auxin biosynthetic process | 2.85E-04 |
| 18 | GO:0006109: regulation of carbohydrate metabolic process | 3.84E-04 |
| 19 | GO:0015994: chlorophyll metabolic process | 3.84E-04 |
| 20 | GO:0010021: amylopectin biosynthetic process | 3.84E-04 |
| 21 | GO:0006656: phosphatidylcholine biosynthetic process | 4.88E-04 |
| 22 | GO:0009643: photosynthetic acclimation | 5.98E-04 |
| 23 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.98E-04 |
| 24 | GO:1901259: chloroplast rRNA processing | 7.13E-04 |
| 25 | GO:0009088: threonine biosynthetic process | 7.13E-04 |
| 26 | GO:0048437: floral organ development | 8.33E-04 |
| 27 | GO:0010196: nonphotochemical quenching | 8.33E-04 |
| 28 | GO:0005978: glycogen biosynthetic process | 9.57E-04 |
| 29 | GO:0009642: response to light intensity | 9.57E-04 |
| 30 | GO:0006353: DNA-templated transcription, termination | 9.57E-04 |
| 31 | GO:0055114: oxidation-reduction process | 1.03E-03 |
| 32 | GO:0015996: chlorophyll catabolic process | 1.09E-03 |
| 33 | GO:0006813: potassium ion transport | 1.14E-03 |
| 34 | GO:0005982: starch metabolic process | 1.36E-03 |
| 35 | GO:0009086: methionine biosynthetic process | 1.36E-03 |
| 36 | GO:0009641: shade avoidance | 1.51E-03 |
| 37 | GO:0009553: embryo sac development | 1.56E-03 |
| 38 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.66E-03 |
| 39 | GO:0043085: positive regulation of catalytic activity | 1.66E-03 |
| 40 | GO:0030048: actin filament-based movement | 1.98E-03 |
| 41 | GO:0018107: peptidyl-threonine phosphorylation | 1.98E-03 |
| 42 | GO:0010223: secondary shoot formation | 2.14E-03 |
| 43 | GO:0035556: intracellular signal transduction | 2.34E-03 |
| 44 | GO:0006418: tRNA aminoacylation for protein translation | 2.85E-03 |
| 45 | GO:0051260: protein homooligomerization | 3.04E-03 |
| 46 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.43E-03 |
| 47 | GO:0009306: protein secretion | 3.63E-03 |
| 48 | GO:0006662: glycerol ether metabolic process | 4.25E-03 |
| 49 | GO:0006814: sodium ion transport | 4.47E-03 |
| 50 | GO:0019252: starch biosynthetic process | 4.68E-03 |
| 51 | GO:0009556: microsporogenesis | 4.68E-03 |
| 52 | GO:0009630: gravitropism | 5.13E-03 |
| 53 | GO:1901657: glycosyl compound metabolic process | 5.37E-03 |
| 54 | GO:0009828: plant-type cell wall loosening | 5.60E-03 |
| 55 | GO:0044550: secondary metabolite biosynthetic process | 5.66E-03 |
| 56 | GO:0045454: cell redox homeostasis | 6.23E-03 |
| 57 | GO:0016126: sterol biosynthetic process | 6.32E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 6.32E-03 |
| 59 | GO:0015995: chlorophyll biosynthetic process | 7.08E-03 |
| 60 | GO:0009813: flavonoid biosynthetic process | 7.87E-03 |
| 61 | GO:0034599: cellular response to oxidative stress | 9.25E-03 |
| 62 | GO:0006631: fatty acid metabolic process | 1.01E-02 |
| 63 | GO:0010114: response to red light | 1.07E-02 |
| 64 | GO:0009664: plant-type cell wall organization | 1.26E-02 |
| 65 | GO:0010224: response to UV-B | 1.35E-02 |
| 66 | GO:0043086: negative regulation of catalytic activity | 1.49E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 1.54E-02 |
| 68 | GO:0018105: peptidyl-serine phosphorylation | 1.73E-02 |
| 69 | GO:0045490: pectin catabolic process | 2.50E-02 |
| 70 | GO:0009826: unidimensional cell growth | 3.32E-02 |
| 71 | GO:0015031: protein transport | 3.52E-02 |
| 72 | GO:0015979: photosynthesis | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 2 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 6 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 7 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 8 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 9 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 4.60E-05 |
| 10 | GO:0080079: cellobiose glucosidase activity | 4.60E-05 |
| 11 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 4.60E-05 |
| 12 | GO:0034256: chlorophyll(ide) b reductase activity | 4.60E-05 |
| 13 | GO:0045486: naringenin 3-dioxygenase activity | 4.60E-05 |
| 14 | GO:0004412: homoserine dehydrogenase activity | 1.13E-04 |
| 15 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.13E-04 |
| 16 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.13E-04 |
| 17 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.13E-04 |
| 18 | GO:0043169: cation binding | 1.95E-04 |
| 19 | GO:0050833: pyruvate transmembrane transporter activity | 1.95E-04 |
| 20 | GO:0008508: bile acid:sodium symporter activity | 2.85E-04 |
| 21 | GO:0004072: aspartate kinase activity | 2.85E-04 |
| 22 | GO:0016851: magnesium chelatase activity | 2.85E-04 |
| 23 | GO:0022890: inorganic cation transmembrane transporter activity | 2.85E-04 |
| 24 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 4.88E-04 |
| 25 | GO:0004629: phospholipase C activity | 5.98E-04 |
| 26 | GO:0004435: phosphatidylinositol phospholipase C activity | 7.13E-04 |
| 27 | GO:0071949: FAD binding | 1.22E-03 |
| 28 | GO:0008047: enzyme activator activity | 1.51E-03 |
| 29 | GO:0047372: acylglycerol lipase activity | 1.66E-03 |
| 30 | GO:0015386: potassium:proton antiporter activity | 1.66E-03 |
| 31 | GO:0008327: methyl-CpG binding | 1.66E-03 |
| 32 | GO:0003774: motor activity | 2.14E-03 |
| 33 | GO:0031418: L-ascorbic acid binding | 2.67E-03 |
| 34 | GO:0004857: enzyme inhibitor activity | 2.67E-03 |
| 35 | GO:0015079: potassium ion transmembrane transporter activity | 2.85E-03 |
| 36 | GO:0016779: nucleotidyltransferase activity | 3.23E-03 |
| 37 | GO:0030570: pectate lyase activity | 3.43E-03 |
| 38 | GO:0004812: aminoacyl-tRNA ligase activity | 3.83E-03 |
| 39 | GO:0047134: protein-disulfide reductase activity | 3.83E-03 |
| 40 | GO:0005249: voltage-gated potassium channel activity | 4.04E-03 |
| 41 | GO:0005525: GTP binding | 4.09E-03 |
| 42 | GO:0004791: thioredoxin-disulfide reductase activity | 4.47E-03 |
| 43 | GO:0015299: solute:proton antiporter activity | 4.47E-03 |
| 44 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.37E-03 |
| 45 | GO:0016597: amino acid binding | 6.08E-03 |
| 46 | GO:0102483: scopolin beta-glucosidase activity | 7.08E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 7.34E-03 |
| 48 | GO:0016491: oxidoreductase activity | 7.54E-03 |
| 49 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.60E-03 |
| 50 | GO:0003746: translation elongation factor activity | 8.96E-03 |
| 51 | GO:0008422: beta-glucosidase activity | 9.53E-03 |
| 52 | GO:0050661: NADP binding | 9.82E-03 |
| 53 | GO:0016787: hydrolase activity | 1.40E-02 |
| 54 | GO:0003777: microtubule motor activity | 1.42E-02 |
| 55 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.52E-02 |
| 56 | GO:0015035: protein disulfide oxidoreductase activity | 1.73E-02 |
| 57 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.81E-02 |
| 58 | GO:0019843: rRNA binding | 1.99E-02 |
| 59 | GO:0016829: lyase activity | 2.10E-02 |
| 60 | GO:0004252: serine-type endopeptidase activity | 2.14E-02 |
| 61 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.97E-02 |
| 62 | GO:0005215: transporter activity | 3.07E-02 |
| 63 | GO:0050660: flavin adenine dinucleotide binding | 3.79E-02 |
| 64 | GO:0004497: monooxygenase activity | 3.98E-02 |
| 65 | GO:0004871: signal transducer activity | 4.68E-02 |
| 66 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.55E-06 |
| 2 | GO:0010007: magnesium chelatase complex | 1.95E-04 |
| 3 | GO:0008076: voltage-gated potassium channel complex | 2.85E-04 |
| 4 | GO:0009534: chloroplast thylakoid | 4.48E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 7.06E-04 |
| 6 | GO:0009501: amyloplast | 9.57E-04 |
| 7 | GO:0009570: chloroplast stroma | 1.21E-03 |
| 8 | GO:0016459: myosin complex | 1.51E-03 |
| 9 | GO:0032040: small-subunit processome | 1.81E-03 |
| 10 | GO:0030095: chloroplast photosystem II | 2.14E-03 |
| 11 | GO:0042651: thylakoid membrane | 2.85E-03 |
| 12 | GO:0031977: thylakoid lumen | 1.01E-02 |
| 13 | GO:0016020: membrane | 1.13E-02 |
| 14 | GO:0009706: chloroplast inner membrane | 1.70E-02 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 1.99E-02 |
| 16 | GO:0005623: cell | 2.03E-02 |
| 17 | GO:0005759: mitochondrial matrix | 2.34E-02 |
| 18 | GO:0009941: chloroplast envelope | 3.75E-02 |
| 19 | GO:0031969: chloroplast membrane | 3.98E-02 |
| 20 | GO:0005730: nucleolus | 4.67E-02 |