GO Enrichment Analysis of Co-expressed Genes with
AT1G04420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0015995: chlorophyll biosynthetic process | 1.11E-09 |
| 3 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.13E-07 |
| 4 | GO:0006000: fructose metabolic process | 1.95E-06 |
| 5 | GO:0009735: response to cytokinin | 2.62E-06 |
| 6 | GO:0015979: photosynthesis | 3.92E-06 |
| 7 | GO:0055114: oxidation-reduction process | 3.70E-05 |
| 8 | GO:0030091: protein repair | 5.57E-05 |
| 9 | GO:0006002: fructose 6-phosphate metabolic process | 7.06E-05 |
| 10 | GO:0071588: hydrogen peroxide mediated signaling pathway | 9.88E-05 |
| 11 | GO:0009631: cold acclimation | 1.37E-04 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 1.48E-04 |
| 13 | GO:0005983: starch catabolic process | 1.72E-04 |
| 14 | GO:0006094: gluconeogenesis | 1.98E-04 |
| 15 | GO:0005986: sucrose biosynthetic process | 1.98E-04 |
| 16 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.32E-04 |
| 17 | GO:0010353: response to trehalose | 2.32E-04 |
| 18 | GO:0042254: ribosome biogenesis | 2.65E-04 |
| 19 | GO:0061077: chaperone-mediated protein folding | 3.84E-04 |
| 20 | GO:0006518: peptide metabolic process | 3.86E-04 |
| 21 | GO:0006412: translation | 5.49E-04 |
| 22 | GO:0071484: cellular response to light intensity | 5.54E-04 |
| 23 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.54E-04 |
| 24 | GO:0044206: UMP salvage | 7.37E-04 |
| 25 | GO:0010021: amylopectin biosynthetic process | 7.37E-04 |
| 26 | GO:0000302: response to reactive oxygen species | 7.65E-04 |
| 27 | GO:0006461: protein complex assembly | 9.32E-04 |
| 28 | GO:0043097: pyrimidine nucleoside salvage | 9.32E-04 |
| 29 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.14E-03 |
| 30 | GO:0006828: manganese ion transport | 1.14E-03 |
| 31 | GO:0006206: pyrimidine nucleobase metabolic process | 1.14E-03 |
| 32 | GO:0010190: cytochrome b6f complex assembly | 1.14E-03 |
| 33 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.14E-03 |
| 34 | GO:0010019: chloroplast-nucleus signaling pathway | 1.36E-03 |
| 35 | GO:0042026: protein refolding | 1.36E-03 |
| 36 | GO:0009854: oxidative photosynthetic carbon pathway | 1.36E-03 |
| 37 | GO:0009610: response to symbiotic fungus | 1.59E-03 |
| 38 | GO:0009772: photosynthetic electron transport in photosystem II | 1.59E-03 |
| 39 | GO:0000105: histidine biosynthetic process | 1.84E-03 |
| 40 | GO:0034599: cellular response to oxidative stress | 1.84E-03 |
| 41 | GO:0009657: plastid organization | 2.10E-03 |
| 42 | GO:0032544: plastid translation | 2.10E-03 |
| 43 | GO:0010206: photosystem II repair | 2.37E-03 |
| 44 | GO:0006783: heme biosynthetic process | 2.37E-03 |
| 45 | GO:0006754: ATP biosynthetic process | 2.37E-03 |
| 46 | GO:0010205: photoinhibition | 2.65E-03 |
| 47 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.95E-03 |
| 48 | GO:0006816: calcium ion transport | 3.25E-03 |
| 49 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.25E-03 |
| 50 | GO:0009750: response to fructose | 3.25E-03 |
| 51 | GO:0019253: reductive pentose-phosphate cycle | 4.22E-03 |
| 52 | GO:0010207: photosystem II assembly | 4.22E-03 |
| 53 | GO:0005985: sucrose metabolic process | 4.57E-03 |
| 54 | GO:0071732: cellular response to nitric oxide | 4.57E-03 |
| 55 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.92E-03 |
| 56 | GO:0009116: nucleoside metabolic process | 5.28E-03 |
| 57 | GO:0000027: ribosomal large subunit assembly | 5.28E-03 |
| 58 | GO:0051017: actin filament bundle assembly | 5.28E-03 |
| 59 | GO:0043622: cortical microtubule organization | 5.65E-03 |
| 60 | GO:0016114: terpenoid biosynthetic process | 6.03E-03 |
| 61 | GO:0042744: hydrogen peroxide catabolic process | 6.13E-03 |
| 62 | GO:0035428: hexose transmembrane transport | 6.42E-03 |
| 63 | GO:0007005: mitochondrion organization | 6.42E-03 |
| 64 | GO:0006633: fatty acid biosynthetic process | 6.76E-03 |
| 65 | GO:0006012: galactose metabolic process | 6.82E-03 |
| 66 | GO:0071369: cellular response to ethylene stimulus | 6.82E-03 |
| 67 | GO:0009409: response to cold | 7.20E-03 |
| 68 | GO:0070417: cellular response to cold | 7.64E-03 |
| 69 | GO:0000413: protein peptidyl-prolyl isomerization | 8.07E-03 |
| 70 | GO:0046323: glucose import | 8.50E-03 |
| 71 | GO:0015986: ATP synthesis coupled proton transport | 8.94E-03 |
| 72 | GO:0019252: starch biosynthetic process | 9.39E-03 |
| 73 | GO:0032502: developmental process | 1.03E-02 |
| 74 | GO:0071281: cellular response to iron ion | 1.08E-02 |
| 75 | GO:0006457: protein folding | 1.09E-02 |
| 76 | GO:0009627: systemic acquired resistance | 1.38E-02 |
| 77 | GO:0016311: dephosphorylation | 1.49E-02 |
| 78 | GO:0008219: cell death | 1.54E-02 |
| 79 | GO:0009817: defense response to fungus, incompatible interaction | 1.54E-02 |
| 80 | GO:0009793: embryo development ending in seed dormancy | 1.62E-02 |
| 81 | GO:0007568: aging | 1.71E-02 |
| 82 | GO:0009853: photorespiration | 1.82E-02 |
| 83 | GO:0006979: response to oxidative stress | 1.94E-02 |
| 84 | GO:0006629: lipid metabolic process | 2.11E-02 |
| 85 | GO:0006096: glycolytic process | 3.04E-02 |
| 86 | GO:0006810: transport | 3.11E-02 |
| 87 | GO:0016036: cellular response to phosphate starvation | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 4 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 5 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 7 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 8 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.30E-08 |
| 10 | GO:0005528: FK506 binding | 1.22E-07 |
| 11 | GO:0019843: rRNA binding | 1.32E-07 |
| 12 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.13E-07 |
| 13 | GO:0016851: magnesium chelatase activity | 4.63E-06 |
| 14 | GO:0004130: cytochrome-c peroxidase activity | 2.21E-05 |
| 15 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.14E-05 |
| 16 | GO:0003735: structural constituent of ribosome | 3.66E-05 |
| 17 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 9.88E-05 |
| 18 | GO:0050521: alpha-glucan, water dikinase activity | 9.88E-05 |
| 19 | GO:0004853: uroporphyrinogen decarboxylase activity | 9.88E-05 |
| 20 | GO:0045485: omega-6 fatty acid desaturase activity | 9.88E-05 |
| 21 | GO:0003879: ATP phosphoribosyltransferase activity | 9.88E-05 |
| 22 | GO:0044183: protein binding involved in protein folding | 1.48E-04 |
| 23 | GO:0033201: alpha-1,4-glucan synthase activity | 2.32E-04 |
| 24 | GO:0008967: phosphoglycolate phosphatase activity | 2.32E-04 |
| 25 | GO:0018708: thiol S-methyltransferase activity | 2.32E-04 |
| 26 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.32E-04 |
| 27 | GO:0070402: NADPH binding | 3.86E-04 |
| 28 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 3.86E-04 |
| 29 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 3.86E-04 |
| 30 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.86E-04 |
| 31 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.86E-04 |
| 32 | GO:0004373: glycogen (starch) synthase activity | 3.86E-04 |
| 33 | GO:0016491: oxidoreductase activity | 3.88E-04 |
| 34 | GO:0019201: nucleotide kinase activity | 5.54E-04 |
| 35 | GO:0004845: uracil phosphoribosyltransferase activity | 7.37E-04 |
| 36 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 7.37E-04 |
| 37 | GO:0009011: starch synthase activity | 7.37E-04 |
| 38 | GO:0003959: NADPH dehydrogenase activity | 9.32E-04 |
| 39 | GO:0004709: MAP kinase kinase kinase activity | 1.14E-03 |
| 40 | GO:0016688: L-ascorbate peroxidase activity | 1.14E-03 |
| 41 | GO:0051920: peroxiredoxin activity | 1.36E-03 |
| 42 | GO:0004017: adenylate kinase activity | 1.36E-03 |
| 43 | GO:0004849: uridine kinase activity | 1.36E-03 |
| 44 | GO:0004222: metalloendopeptidase activity | 1.54E-03 |
| 45 | GO:0016209: antioxidant activity | 1.84E-03 |
| 46 | GO:0004034: aldose 1-epimerase activity | 1.84E-03 |
| 47 | GO:0005384: manganese ion transmembrane transporter activity | 2.65E-03 |
| 48 | GO:0047617: acyl-CoA hydrolase activity | 2.65E-03 |
| 49 | GO:0030234: enzyme regulator activity | 2.95E-03 |
| 50 | GO:0047372: acylglycerol lipase activity | 3.25E-03 |
| 51 | GO:0015386: potassium:proton antiporter activity | 3.25E-03 |
| 52 | GO:0015095: magnesium ion transmembrane transporter activity | 3.89E-03 |
| 53 | GO:0008266: poly(U) RNA binding | 4.22E-03 |
| 54 | GO:0015079: potassium ion transmembrane transporter activity | 5.65E-03 |
| 55 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 8.50E-03 |
| 56 | GO:0016853: isomerase activity | 8.94E-03 |
| 57 | GO:0005355: glucose transmembrane transporter activity | 8.94E-03 |
| 58 | GO:0048038: quinone binding | 9.85E-03 |
| 59 | GO:0051015: actin filament binding | 1.08E-02 |
| 60 | GO:0004601: peroxidase activity | 1.15E-02 |
| 61 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.18E-02 |
| 62 | GO:0008237: metallopeptidase activity | 1.18E-02 |
| 63 | GO:0016787: hydrolase activity | 1.44E-02 |
| 64 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.31E-02 |
| 65 | GO:0051082: unfolded protein binding | 3.47E-02 |
| 66 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.15E-02 |
| 67 | GO:0015144: carbohydrate transmembrane transporter activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.73E-44 |
| 3 | GO:0009570: chloroplast stroma | 2.05E-31 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.98E-29 |
| 5 | GO:0009941: chloroplast envelope | 6.34E-25 |
| 6 | GO:0009534: chloroplast thylakoid | 4.05E-21 |
| 7 | GO:0009579: thylakoid | 1.61E-16 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.94E-12 |
| 9 | GO:0031977: thylakoid lumen | 1.05E-10 |
| 10 | GO:0010007: magnesium chelatase complex | 1.95E-06 |
| 11 | GO:0031969: chloroplast membrane | 2.65E-06 |
| 12 | GO:0005840: ribosome | 3.69E-05 |
| 13 | GO:0010319: stromule | 6.23E-05 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.74E-05 |
| 15 | GO:0030095: chloroplast photosystem II | 2.25E-04 |
| 16 | GO:0031357: integral component of chloroplast inner membrane | 2.32E-04 |
| 17 | GO:0009706: chloroplast inner membrane | 5.21E-04 |
| 18 | GO:0009544: chloroplast ATP synthase complex | 7.37E-04 |
| 19 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.14E-03 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 1.59E-03 |
| 21 | GO:0009501: amyloplast | 1.84E-03 |
| 22 | GO:0048046: apoplast | 2.91E-03 |
| 23 | GO:0042651: thylakoid membrane | 5.65E-03 |
| 24 | GO:0015935: small ribosomal subunit | 6.03E-03 |
| 25 | GO:0015629: actin cytoskeleton | 6.82E-03 |
| 26 | GO:0022626: cytosolic ribosome | 7.43E-03 |
| 27 | GO:0009523: photosystem II | 9.39E-03 |
| 28 | GO:0022625: cytosolic large ribosomal subunit | 1.50E-02 |
| 29 | GO:0009707: chloroplast outer membrane | 1.54E-02 |
| 30 | GO:0015934: large ribosomal subunit | 1.71E-02 |
| 31 | GO:0005856: cytoskeleton | 2.37E-02 |
| 32 | GO:0009536: plastid | 2.49E-02 |
| 33 | GO:0010287: plastoglobule | 3.92E-02 |