GO Enrichment Analysis of Co-expressed Genes with
AT1G04250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0071277: cellular response to calcium ion | 5.18E-05 |
| 4 | GO:0015671: oxygen transport | 5.18E-05 |
| 5 | GO:0010143: cutin biosynthetic process | 9.00E-05 |
| 6 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.16E-04 |
| 7 | GO:0080029: cellular response to boron-containing substance levels | 1.27E-04 |
| 8 | GO:0015714: phosphoenolpyruvate transport | 2.17E-04 |
| 9 | GO:0090391: granum assembly | 2.17E-04 |
| 10 | GO:0006081: cellular aldehyde metabolic process | 2.17E-04 |
| 11 | GO:0046713: borate transport | 3.17E-04 |
| 12 | GO:0015713: phosphoglycerate transport | 4.24E-04 |
| 13 | GO:0006021: inositol biosynthetic process | 4.24E-04 |
| 14 | GO:0010190: cytochrome b6f complex assembly | 6.60E-04 |
| 15 | GO:0009972: cytidine deamination | 6.60E-04 |
| 16 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 6.60E-04 |
| 17 | GO:0010189: vitamin E biosynthetic process | 7.87E-04 |
| 18 | GO:0010196: nonphotochemical quenching | 9.18E-04 |
| 19 | GO:0006631: fatty acid metabolic process | 9.22E-04 |
| 20 | GO:0019827: stem cell population maintenance | 1.06E-03 |
| 21 | GO:0009642: response to light intensity | 1.06E-03 |
| 22 | GO:0009704: de-etiolation | 1.06E-03 |
| 23 | GO:0032259: methylation | 1.22E-03 |
| 24 | GO:0019432: triglyceride biosynthetic process | 1.35E-03 |
| 25 | GO:0090333: regulation of stomatal closure | 1.35E-03 |
| 26 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.35E-03 |
| 27 | GO:0006096: glycolytic process | 1.56E-03 |
| 28 | GO:0055114: oxidation-reduction process | 1.57E-03 |
| 29 | GO:0006535: cysteine biosynthetic process from serine | 1.67E-03 |
| 30 | GO:0043085: positive regulation of catalytic activity | 1.84E-03 |
| 31 | GO:0006006: glucose metabolic process | 2.19E-03 |
| 32 | GO:0006094: gluconeogenesis | 2.19E-03 |
| 33 | GO:0019253: reductive pentose-phosphate cycle | 2.38E-03 |
| 34 | GO:0010207: photosystem II assembly | 2.38E-03 |
| 35 | GO:0009266: response to temperature stimulus | 2.38E-03 |
| 36 | GO:0010025: wax biosynthetic process | 2.76E-03 |
| 37 | GO:0019762: glucosinolate catabolic process | 2.76E-03 |
| 38 | GO:0006633: fatty acid biosynthetic process | 2.90E-03 |
| 39 | GO:0019344: cysteine biosynthetic process | 2.96E-03 |
| 40 | GO:0016998: cell wall macromolecule catabolic process | 3.37E-03 |
| 41 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.59E-03 |
| 42 | GO:0016117: carotenoid biosynthetic process | 4.26E-03 |
| 43 | GO:0006662: glycerol ether metabolic process | 4.72E-03 |
| 44 | GO:0019252: starch biosynthetic process | 5.21E-03 |
| 45 | GO:0008654: phospholipid biosynthetic process | 5.21E-03 |
| 46 | GO:0051607: defense response to virus | 6.76E-03 |
| 47 | GO:0015979: photosynthesis | 6.93E-03 |
| 48 | GO:0010027: thylakoid membrane organization | 7.04E-03 |
| 49 | GO:0045454: cell redox homeostasis | 7.27E-03 |
| 50 | GO:0015995: chlorophyll biosynthetic process | 7.88E-03 |
| 51 | GO:0010411: xyloglucan metabolic process | 7.88E-03 |
| 52 | GO:0010311: lateral root formation | 8.76E-03 |
| 53 | GO:0000160: phosphorelay signal transduction system | 8.76E-03 |
| 54 | GO:0034599: cellular response to oxidative stress | 1.03E-02 |
| 55 | GO:0042542: response to hydrogen peroxide | 1.16E-02 |
| 56 | GO:0051707: response to other organism | 1.19E-02 |
| 57 | GO:0000209: protein polyubiquitination | 1.23E-02 |
| 58 | GO:0042546: cell wall biogenesis | 1.23E-02 |
| 59 | GO:0009644: response to high light intensity | 1.26E-02 |
| 60 | GO:0009735: response to cytokinin | 1.46E-02 |
| 61 | GO:0009736: cytokinin-activated signaling pathway | 1.47E-02 |
| 62 | GO:0042545: cell wall modification | 1.85E-02 |
| 63 | GO:0016036: cellular response to phosphate starvation | 2.66E-02 |
| 64 | GO:0045490: pectin catabolic process | 2.79E-02 |
| 65 | GO:0080167: response to karrikin | 4.44E-02 |
| 66 | GO:0010200: response to chitin | 4.55E-02 |
| 67 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.55E-02 |
| 68 | GO:0006810: transport | 4.73E-02 |
| 69 | GO:0005975: carbohydrate metabolic process | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.00E-05 |
| 7 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 5.18E-05 |
| 8 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 5.18E-05 |
| 9 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 5.18E-05 |
| 10 | GO:0015168: glycerol transmembrane transporter activity | 5.18E-05 |
| 11 | GO:0005344: oxygen transporter activity | 5.18E-05 |
| 12 | GO:0035671: enone reductase activity | 5.18E-05 |
| 13 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 5.18E-05 |
| 14 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 5.18E-05 |
| 15 | GO:0004512: inositol-3-phosphate synthase activity | 1.27E-04 |
| 16 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.27E-04 |
| 17 | GO:0018708: thiol S-methyltransferase activity | 1.27E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 1.27E-04 |
| 19 | GO:0042389: omega-3 fatty acid desaturase activity | 1.27E-04 |
| 20 | GO:0004373: glycogen (starch) synthase activity | 2.17E-04 |
| 21 | GO:0050734: hydroxycinnamoyltransferase activity | 2.17E-04 |
| 22 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 2.17E-04 |
| 23 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 2.17E-04 |
| 24 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.17E-04 |
| 25 | GO:0046715: borate transmembrane transporter activity | 3.17E-04 |
| 26 | GO:0017057: 6-phosphogluconolactonase activity | 3.17E-04 |
| 27 | GO:0009011: starch synthase activity | 4.24E-04 |
| 28 | GO:0015204: urea transmembrane transporter activity | 4.24E-04 |
| 29 | GO:0015120: phosphoglycerate transmembrane transporter activity | 4.24E-04 |
| 30 | GO:0008168: methyltransferase activity | 5.85E-04 |
| 31 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 6.60E-04 |
| 32 | GO:0004332: fructose-bisphosphate aldolase activity | 6.60E-04 |
| 33 | GO:0004126: cytidine deaminase activity | 7.87E-04 |
| 34 | GO:0102391: decanoate--CoA ligase activity | 7.87E-04 |
| 35 | GO:0004124: cysteine synthase activity | 7.87E-04 |
| 36 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.18E-04 |
| 37 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.20E-03 |
| 38 | GO:0008047: enzyme activator activity | 1.67E-03 |
| 39 | GO:0015035: protein disulfide oxidoreductase activity | 1.92E-03 |
| 40 | GO:0004565: beta-galactosidase activity | 2.19E-03 |
| 41 | GO:0047134: protein-disulfide reductase activity | 4.26E-03 |
| 42 | GO:0004791: thioredoxin-disulfide reductase activity | 4.96E-03 |
| 43 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.46E-03 |
| 44 | GO:0000156: phosphorelay response regulator activity | 5.97E-03 |
| 45 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.97E-03 |
| 46 | GO:0015250: water channel activity | 7.04E-03 |
| 47 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.88E-03 |
| 48 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 8.17E-03 |
| 49 | GO:0050661: NADP binding | 1.09E-02 |
| 50 | GO:0051287: NAD binding | 1.37E-02 |
| 51 | GO:0031625: ubiquitin protein ligase binding | 1.58E-02 |
| 52 | GO:0045330: aspartyl esterase activity | 1.58E-02 |
| 53 | GO:0030599: pectinesterase activity | 1.81E-02 |
| 54 | GO:0016740: transferase activity | 1.95E-02 |
| 55 | GO:0019825: oxygen binding | 2.28E-02 |
| 56 | GO:0030170: pyridoxal phosphate binding | 2.39E-02 |
| 57 | GO:0015297: antiporter activity | 2.70E-02 |
| 58 | GO:0016788: hydrolase activity, acting on ester bonds | 3.86E-02 |
| 59 | GO:0061630: ubiquitin protein ligase activity | 4.60E-02 |
| 60 | GO:0052689: carboxylic ester hydrolase activity | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.38E-08 |
| 2 | GO:0009534: chloroplast thylakoid | 6.07E-06 |
| 3 | GO:0009515: granal stacked thylakoid | 5.18E-05 |
| 4 | GO:0031969: chloroplast membrane | 8.43E-05 |
| 5 | GO:0009569: chloroplast starch grain | 1.27E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.85E-04 |
| 7 | GO:0009579: thylakoid | 5.61E-04 |
| 8 | GO:0009941: chloroplast envelope | 8.64E-04 |
| 9 | GO:0048046: apoplast | 2.16E-03 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 2.32E-03 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 3.16E-03 |
| 12 | GO:0019898: extrinsic component of membrane | 5.21E-03 |
| 13 | GO:0010319: stromule | 6.49E-03 |
| 14 | GO:0031977: thylakoid lumen | 1.13E-02 |
| 15 | GO:0009570: chloroplast stroma | 2.11E-02 |
| 16 | GO:0005623: cell | 2.26E-02 |
| 17 | GO:0005618: cell wall | 3.68E-02 |
| 18 | GO:0009505: plant-type cell wall | 4.05E-02 |