Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G04070

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006983: ER overload response0.00E+00
2GO:1902009: positive regulation of toxin transport0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:1902289: negative regulation of defense response to oomycetes0.00E+00
5GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
6GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
7GO:0046865: terpenoid transport0.00E+00
8GO:0050691: regulation of defense response to virus by host3.50E-05
9GO:0002237: response to molecule of bacterial origin5.08E-05
10GO:0009751: response to salicylic acid6.60E-05
11GO:0030150: protein import into mitochondrial matrix7.44E-05
12GO:0043066: negative regulation of apoptotic process8.78E-05
13GO:0080168: abscisic acid transport1.52E-04
14GO:0015783: GDP-fucose transport1.52E-04
15GO:0015692: lead ion transport1.52E-04
16GO:0080037: negative regulation of cytokinin-activated signaling pathway3.05E-04
17GO:2000762: regulation of phenylpropanoid metabolic process3.89E-04
18GO:0009723: response to ethylene3.90E-04
19GO:1900425: negative regulation of defense response to bacterium4.78E-04
20GO:0006333: chromatin assembly or disassembly6.66E-04
21GO:0031540: regulation of anthocyanin biosynthetic process7.68E-04
22GO:0030162: regulation of proteolysis7.68E-04
23GO:0015780: nucleotide-sugar transport9.78E-04
24GO:0009086: methionine biosynthetic process1.09E-03
25GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.09E-03
26GO:0046686: response to cadmium ion1.12E-03
27GO:0043069: negative regulation of programmed cell death1.20E-03
28GO:0051555: flavonol biosynthetic process1.20E-03
29GO:0019684: photosynthesis, light reaction1.32E-03
30GO:0009089: lysine biosynthetic process via diaminopimelate1.32E-03
31GO:0009684: indoleacetic acid biosynthetic process1.32E-03
32GO:0000038: very long-chain fatty acid metabolic process1.32E-03
33GO:0045037: protein import into chloroplast stroma1.44E-03
34GO:2000012: regulation of auxin polar transport1.57E-03
35GO:0046688: response to copper ion1.84E-03
36GO:0000162: tryptophan biosynthetic process1.97E-03
37GO:0034976: response to endoplasmic reticulum stress1.97E-03
38GO:0006289: nucleotide-excision repair2.12E-03
39GO:0000027: ribosomal large subunit assembly2.12E-03
40GO:0009863: salicylic acid mediated signaling pathway2.12E-03
41GO:0006825: copper ion transport2.26E-03
42GO:0006334: nucleosome assembly2.41E-03
43GO:0031348: negative regulation of defense response2.56E-03
44GO:0010197: polar nucleus fusion3.36E-03
45GO:0042742: defense response to bacterium3.42E-03
46GO:0002229: defense response to oomycetes3.88E-03
47GO:0010193: response to ozone3.88E-03
48GO:0032502: developmental process4.06E-03
49GO:0015031: protein transport4.63E-03
50GO:0006906: vesicle fusion5.38E-03
51GO:0009753: response to jasmonic acid5.83E-03
52GO:0000724: double-strand break repair via homologous recombination6.83E-03
53GO:0006887: exocytosis7.95E-03
54GO:0051707: response to other organism8.41E-03
55GO:0008643: carbohydrate transport8.88E-03
56GO:0009636: response to toxic substance9.12E-03
57GO:0006855: drug transmembrane transport9.36E-03
58GO:0031347: regulation of defense response9.61E-03
59GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.61E-03
60GO:0010224: response to UV-B1.06E-02
61GO:0000398: mRNA splicing, via spliceosome1.47E-02
62GO:0006351: transcription, DNA-templated1.48E-02
63GO:0009651: response to salt stress1.59E-02
64GO:0009790: embryo development1.74E-02
65GO:0016036: cellular response to phosphate starvation1.86E-02
66GO:0009414: response to water deprivation1.91E-02
67GO:0010150: leaf senescence1.96E-02
68GO:0009451: RNA modification1.99E-02
69GO:0009739: response to gibberellin2.12E-02
70GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.12E-02
71GO:0006470: protein dephosphorylation2.15E-02
72GO:0008380: RNA splicing2.22E-02
73GO:0009617: response to bacterium2.22E-02
74GO:0006952: defense response2.98E-02
75GO:0080167: response to karrikin3.11E-02
76GO:0010200: response to chitin3.19E-02
77GO:0016192: vesicle-mediated transport3.23E-02
78GO:0044550: secondary metabolite biosynthetic process3.31E-02
79GO:0006355: regulation of transcription, DNA-templated3.45E-02
80GO:0032259: methylation3.98E-02
81GO:0009408: response to heat4.11E-02
82GO:0009737: response to abscisic acid4.16E-02
83GO:0008152: metabolic process4.41E-02
84GO:0009873: ethylene-activated signaling pathway4.93E-02
RankGO TermAdjusted P value
1GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
2GO:0047150: betaine-homocysteine S-methyltransferase activity3.50E-05
3GO:0010285: L,L-diaminopimelate aminotransferase activity3.50E-05
4GO:0015036: disulfide oxidoreductase activity8.78E-05
5GO:0050736: O-malonyltransferase activity8.78E-05
6GO:0005457: GDP-fucose transmembrane transporter activity1.52E-04
7GO:0016531: copper chaperone activity1.52E-04
8GO:0030527: structural constituent of chromatin2.25E-04
9GO:0004834: tryptophan synthase activity3.05E-04
10GO:0003682: chromatin binding3.47E-04
11GO:0047893: flavonol 3-O-glucosyltransferase activity7.68E-04
12GO:0015266: protein channel activity1.57E-03
13GO:0001046: core promoter sequence-specific DNA binding2.12E-03
14GO:0035251: UDP-glucosyltransferase activity2.41E-03
15GO:0008483: transaminase activity4.60E-03
16GO:0004722: protein serine/threonine phosphatase activity4.84E-03
17GO:0003700: transcription factor activity, sequence-specific DNA binding5.07E-03
18GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity5.99E-03
19GO:0043565: sequence-specific DNA binding6.74E-03
20GO:0000149: SNARE binding7.49E-03
21GO:0005484: SNAP receptor activity8.41E-03
22GO:0031625: ubiquitin protein ligase binding1.11E-02
23GO:0016740: transferase activity1.18E-02
24GO:0080043: quercetin 3-O-glucosyltransferase activity1.25E-02
25GO:0080044: quercetin 7-O-glucosyltransferase activity1.25E-02
26GO:0005516: calmodulin binding1.45E-02
27GO:0016758: transferase activity, transferring hexosyl groups1.53E-02
28GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.59E-02
29GO:0030170: pyridoxal phosphate binding1.68E-02
30GO:0008565: protein transporter activity1.77E-02
31GO:0015297: antiporter activity1.89E-02
32GO:0003677: DNA binding1.94E-02
33GO:0008194: UDP-glycosyltransferase activity2.12E-02
34GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.32E-02
35GO:0042802: identical protein binding2.32E-02
36GO:0008168: methyltransferase activity2.60E-02
37GO:0043531: ADP binding2.85E-02
38GO:0004497: monooxygenase activity3.11E-02
39GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.54E-02
40GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.74E-02
41GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.82E-02
42GO:0003735: structural constituent of ribosome3.89E-02
43GO:0004519: endonuclease activity4.36E-02
RankGO TermAdjusted P value
1GO:0031314: extrinsic component of mitochondrial inner membrane8.78E-05
2GO:0005744: mitochondrial inner membrane presequence translocase complex1.24E-04
3GO:0000164: protein phosphatase type 1 complex3.89E-04
4GO:0005743: mitochondrial inner membrane6.34E-04
5GO:0031305: integral component of mitochondrial inner membrane7.68E-04
6GO:0005758: mitochondrial intermembrane space2.12E-03
7GO:0005783: endoplasmic reticulum2.75E-03
8GO:0022625: cytosolic large ribosomal subunit3.88E-03
9GO:0016592: mediator complex4.06E-03
10GO:0000785: chromatin4.06E-03
11GO:0016020: membrane4.79E-03
12GO:0005788: endoplasmic reticulum lumen5.18E-03
13GO:0019005: SCF ubiquitin ligase complex5.99E-03
14GO:0043231: intracellular membrane-bounded organelle5.99E-03
15GO:0015934: large ribosomal subunit6.61E-03
16GO:0031201: SNARE complex7.95E-03
17GO:0022626: cytosolic ribosome9.22E-03
18GO:0005635: nuclear envelope1.09E-02
19GO:0005681: spliceosomal complex1.17E-02
20GO:0016607: nuclear speck1.19E-02
21GO:0009706: chloroplast inner membrane1.33E-02
22GO:0009543: chloroplast thylakoid lumen1.56E-02
23GO:0005774: vacuolar membrane1.65E-02
24GO:0016021: integral component of membrane2.54E-02
25GO:0000139: Golgi membrane2.65E-02
26GO:0005789: endoplasmic reticulum membrane2.99E-02
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Gene type



Gene DE type