Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G03860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process0.00E+00
2GO:0002191: cap-dependent translational initiation0.00E+00
3GO:0050665: hydrogen peroxide biosynthetic process6.96E-07
4GO:0006511: ubiquitin-dependent protein catabolic process1.01E-06
5GO:0051788: response to misfolded protein3.21E-05
6GO:0010498: proteasomal protein catabolic process5.78E-05
7GO:0055074: calcium ion homeostasis5.78E-05
8GO:0009647: skotomorphogenesis8.79E-05
9GO:0010255: glucose mediated signaling pathway8.79E-05
10GO:0010387: COP9 signalosome assembly1.22E-04
11GO:0010363: regulation of plant-type hypersensitive response1.22E-04
12GO:0006221: pyrimidine nucleotide biosynthetic process1.22E-04
13GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.98E-04
14GO:0001731: formation of translation preinitiation complex1.98E-04
15GO:0043248: proteasome assembly1.98E-04
16GO:0009854: oxidative photosynthetic carbon pathway2.39E-04
17GO:0048528: post-embryonic root development2.82E-04
18GO:0000338: protein deneddylation2.82E-04
19GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.82E-04
20GO:0009553: embryo sac development3.14E-04
21GO:0031540: regulation of anthocyanin biosynthetic process3.27E-04
22GO:0048766: root hair initiation3.27E-04
23GO:0019375: galactolipid biosynthetic process3.27E-04
24GO:0009932: cell tip growth3.73E-04
25GO:0048765: root hair cell differentiation5.71E-04
26GO:0046856: phosphatidylinositol dephosphorylation5.71E-04
27GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.14E-04
28GO:0006446: regulation of translational initiation7.31E-04
29GO:0010053: root epidermal cell differentiation7.88E-04
30GO:0034976: response to endoplasmic reticulum stress8.44E-04
31GO:0010431: seed maturation1.02E-03
32GO:0030433: ubiquitin-dependent ERAD pathway1.08E-03
33GO:0046686: response to cadmium ion1.11E-03
34GO:0048868: pollen tube development1.40E-03
35GO:0010154: fruit development1.40E-03
36GO:0048825: cotyledon development1.54E-03
37GO:0030163: protein catabolic process1.76E-03
38GO:0009793: embryo development ending in seed dormancy1.82E-03
39GO:0009567: double fertilization forming a zygote and endosperm1.83E-03
40GO:0010043: response to zinc ion2.71E-03
41GO:0009651: response to salt stress2.91E-03
42GO:0006457: protein folding3.35E-03
43GO:0009640: photomorphogenesis3.43E-03
44GO:0009585: red, far-red light phototransduction4.20E-03
45GO:0009736: cytokinin-activated signaling pathway4.20E-03
46GO:0051603: proteolysis involved in cellular protein catabolic process4.30E-03
47GO:0009409: response to cold7.05E-03
48GO:0006413: translational initiation7.42E-03
49GO:0009617: response to bacterium8.82E-03
50GO:0007275: multicellular organism development1.03E-02
51GO:0048366: leaf development1.19E-02
52GO:0046777: protein autophosphorylation1.29E-02
53GO:0045454: cell redox homeostasis1.40E-02
54GO:0009408: response to heat1.62E-02
55GO:0009753: response to jasmonic acid1.71E-02
56GO:0009908: flower development2.27E-02
57GO:0009735: response to cytokinin2.29E-02
58GO:0009416: response to light stimulus2.44E-02
59GO:0009555: pollen development2.44E-02
60GO:0009414: response to water deprivation3.97E-02
61GO:0042742: defense response to bacterium4.04E-02
62GO:0006979: response to oxidative stress4.06E-02
63GO:0009733: response to auxin4.39E-02
RankGO TermAdjusted P value
1GO:0098808: mRNA cap binding0.00E+00
2GO:0004298: threonine-type endopeptidase activity1.14E-07
3GO:0008233: peptidase activity1.87E-06
4GO:0004127: cytidylate kinase activity3.21E-05
5GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity8.79E-05
6GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity8.79E-05
7GO:0009041: uridylate kinase activity8.79E-05
8GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity8.79E-05
9GO:0008891: glycolate oxidase activity1.22E-04
10GO:0036402: proteasome-activating ATPase activity1.98E-04
11GO:0016887: ATPase activity2.18E-04
12GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.76E-04
13GO:0017025: TBP-class protein binding7.88E-04
14GO:0003756: protein disulfide isomerase activity1.21E-03
15GO:0016853: isomerase activity1.47E-03
16GO:0010181: FMN binding1.47E-03
17GO:0004222: metalloendopeptidase activity2.63E-03
18GO:0051082: unfolded protein binding5.34E-03
19GO:0005524: ATP binding5.70E-03
20GO:0003743: translation initiation factor activity8.69E-03
21GO:0000287: magnesium ion binding1.04E-02
22GO:0030246: carbohydrate binding3.02E-02
23GO:0005516: calmodulin binding3.27E-02
24GO:0005525: GTP binding3.48E-02
25GO:0005509: calcium ion binding3.81E-02
26GO:0016491: oxidoreductase activity4.91E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex1.39E-14
2GO:0005839: proteasome core complex1.14E-07
3GO:0031595: nuclear proteasome complex1.45E-06
4GO:0019773: proteasome core complex, alpha-subunit complex2.58E-06
5GO:0008541: proteasome regulatory particle, lid subcomplex6.19E-06
6GO:0016282: eukaryotic 43S preinitiation complex1.98E-04
7GO:0031597: cytosolic proteasome complex2.39E-04
8GO:0033290: eukaryotic 48S preinitiation complex2.39E-04
9GO:0008180: COP9 signalosome4.21E-04
10GO:0008540: proteasome regulatory particle, base subcomplex4.69E-04
11GO:0005774: vacuolar membrane4.82E-04
12GO:0005737: cytoplasm5.82E-04
13GO:0005829: cytosol7.55E-04
14GO:0043234: protein complex8.44E-04
15GO:0005741: mitochondrial outer membrane1.02E-03
16GO:0016592: mediator complex1.68E-03
17GO:0005788: endoplasmic reticulum lumen2.14E-03
18GO:0048046: apoplast3.22E-03
19GO:0031966: mitochondrial membrane4.00E-03
20GO:0005783: endoplasmic reticulum7.36E-03
21GO:0005634: nucleus1.03E-02
22GO:0009506: plasmodesma1.66E-02
23GO:0022626: cytosolic ribosome2.37E-02
24GO:0005777: peroxisome2.69E-02
25GO:0005773: vacuole2.78E-02
26GO:0009505: plant-type cell wall4.74E-02
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Gene type



Gene DE type