GO Enrichment Analysis of Co-expressed Genes with
AT1G03600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 7.86E-11 |
| 7 | GO:0015979: photosynthesis | 1.45E-09 |
| 8 | GO:0042254: ribosome biogenesis | 7.45E-08 |
| 9 | GO:0032544: plastid translation | 1.33E-07 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 1.48E-07 |
| 11 | GO:0006412: translation | 7.27E-07 |
| 12 | GO:0090391: granum assembly | 1.41E-05 |
| 13 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.17E-05 |
| 14 | GO:0009735: response to cytokinin | 4.71E-05 |
| 15 | GO:0015994: chlorophyll metabolic process | 5.68E-05 |
| 16 | GO:0010207: photosystem II assembly | 6.35E-05 |
| 17 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.30E-04 |
| 18 | GO:1901259: chloroplast rRNA processing | 1.78E-04 |
| 19 | GO:0009772: photosynthetic electron transport in photosystem II | 2.33E-04 |
| 20 | GO:0010028: xanthophyll cycle | 2.94E-04 |
| 21 | GO:0034337: RNA folding | 2.94E-04 |
| 22 | GO:0000476: maturation of 4.5S rRNA | 2.94E-04 |
| 23 | GO:0000967: rRNA 5'-end processing | 2.94E-04 |
| 24 | GO:0009657: plastid organization | 3.62E-04 |
| 25 | GO:0016122: xanthophyll metabolic process | 6.45E-04 |
| 26 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.45E-04 |
| 27 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.45E-04 |
| 28 | GO:0010270: photosystem II oxygen evolving complex assembly | 6.45E-04 |
| 29 | GO:0034470: ncRNA processing | 6.45E-04 |
| 30 | GO:0006094: gluconeogenesis | 8.98E-04 |
| 31 | GO:0006518: peptide metabolic process | 1.04E-03 |
| 32 | GO:0035436: triose phosphate transmembrane transport | 1.04E-03 |
| 33 | GO:0006000: fructose metabolic process | 1.04E-03 |
| 34 | GO:0006633: fatty acid biosynthetic process | 1.21E-03 |
| 35 | GO:0010731: protein glutathionylation | 1.50E-03 |
| 36 | GO:0006020: inositol metabolic process | 1.50E-03 |
| 37 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.50E-03 |
| 38 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.53E-03 |
| 39 | GO:0010114: response to red light | 1.56E-03 |
| 40 | GO:0061077: chaperone-mediated protein folding | 1.68E-03 |
| 41 | GO:0006021: inositol biosynthetic process | 2.01E-03 |
| 42 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.01E-03 |
| 43 | GO:0045727: positive regulation of translation | 2.01E-03 |
| 44 | GO:0015713: phosphoglycerate transport | 2.01E-03 |
| 45 | GO:0006364: rRNA processing | 2.27E-03 |
| 46 | GO:0006564: L-serine biosynthetic process | 2.56E-03 |
| 47 | GO:0006461: protein complex assembly | 2.56E-03 |
| 48 | GO:0015986: ATP synthesis coupled proton transport | 2.94E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 3.16E-03 |
| 50 | GO:0009643: photosynthetic acclimation | 3.16E-03 |
| 51 | GO:0019252: starch biosynthetic process | 3.16E-03 |
| 52 | GO:0006751: glutathione catabolic process | 3.16E-03 |
| 53 | GO:0042549: photosystem II stabilization | 3.16E-03 |
| 54 | GO:0006828: manganese ion transport | 3.16E-03 |
| 55 | GO:0046855: inositol phosphate dephosphorylation | 3.16E-03 |
| 56 | GO:1902456: regulation of stomatal opening | 3.16E-03 |
| 57 | GO:0006810: transport | 3.48E-03 |
| 58 | GO:0009854: oxidative photosynthetic carbon pathway | 3.81E-03 |
| 59 | GO:0009955: adaxial/abaxial pattern specification | 3.81E-03 |
| 60 | GO:0010196: nonphotochemical quenching | 4.49E-03 |
| 61 | GO:0055114: oxidation-reduction process | 4.71E-03 |
| 62 | GO:0010027: thylakoid membrane organization | 4.88E-03 |
| 63 | GO:0009642: response to light intensity | 5.21E-03 |
| 64 | GO:0006353: DNA-templated transcription, termination | 5.21E-03 |
| 65 | GO:0030091: protein repair | 5.21E-03 |
| 66 | GO:0006002: fructose 6-phosphate metabolic process | 5.98E-03 |
| 67 | GO:0006783: heme biosynthetic process | 6.77E-03 |
| 68 | GO:0006754: ATP biosynthetic process | 6.77E-03 |
| 69 | GO:0006098: pentose-phosphate shunt | 6.77E-03 |
| 70 | GO:0005982: starch metabolic process | 7.60E-03 |
| 71 | GO:0009853: photorespiration | 8.08E-03 |
| 72 | GO:0009739: response to gibberellin | 8.25E-03 |
| 73 | GO:0045036: protein targeting to chloroplast | 8.48E-03 |
| 74 | GO:0009641: shade avoidance | 8.48E-03 |
| 75 | GO:0006949: syncytium formation | 8.48E-03 |
| 76 | GO:0006782: protoporphyrinogen IX biosynthetic process | 8.48E-03 |
| 77 | GO:0043085: positive regulation of catalytic activity | 9.38E-03 |
| 78 | GO:0000272: polysaccharide catabolic process | 9.38E-03 |
| 79 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.38E-03 |
| 80 | GO:0006816: calcium ion transport | 9.38E-03 |
| 81 | GO:0006415: translational termination | 9.38E-03 |
| 82 | GO:0006790: sulfur compound metabolic process | 1.03E-02 |
| 83 | GO:0005983: starch catabolic process | 1.03E-02 |
| 84 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.03E-02 |
| 85 | GO:0005986: sucrose biosynthetic process | 1.13E-02 |
| 86 | GO:0010223: secondary shoot formation | 1.23E-02 |
| 87 | GO:0009266: response to temperature stimulus | 1.23E-02 |
| 88 | GO:0010143: cutin biosynthetic process | 1.23E-02 |
| 89 | GO:0019253: reductive pentose-phosphate cycle | 1.23E-02 |
| 90 | GO:0009658: chloroplast organization | 1.25E-02 |
| 91 | GO:0046854: phosphatidylinositol phosphorylation | 1.33E-02 |
| 92 | GO:0005985: sucrose metabolic process | 1.33E-02 |
| 93 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.44E-02 |
| 94 | GO:0051017: actin filament bundle assembly | 1.55E-02 |
| 95 | GO:0000027: ribosomal large subunit assembly | 1.55E-02 |
| 96 | GO:0006418: tRNA aminoacylation for protein translation | 1.66E-02 |
| 97 | GO:0016114: terpenoid biosynthetic process | 1.78E-02 |
| 98 | GO:0009740: gibberellic acid mediated signaling pathway | 1.89E-02 |
| 99 | GO:0035428: hexose transmembrane transport | 1.90E-02 |
| 100 | GO:0016226: iron-sulfur cluster assembly | 1.90E-02 |
| 101 | GO:0006396: RNA processing | 2.07E-02 |
| 102 | GO:0016117: carotenoid biosynthetic process | 2.27E-02 |
| 103 | GO:0042631: cellular response to water deprivation | 2.40E-02 |
| 104 | GO:0006662: glycerol ether metabolic process | 2.53E-02 |
| 105 | GO:0046323: glucose import | 2.53E-02 |
| 106 | GO:0032259: methylation | 2.54E-02 |
| 107 | GO:0009409: response to cold | 2.58E-02 |
| 108 | GO:0032502: developmental process | 3.08E-02 |
| 109 | GO:0009828: plant-type cell wall loosening | 3.37E-02 |
| 110 | GO:0042128: nitrate assimilation | 4.13E-02 |
| 111 | GO:0018298: protein-chromophore linkage | 4.61E-02 |
| 112 | GO:0009817: defense response to fungus, incompatible interaction | 4.61E-02 |
| 113 | GO:0048481: plant ovule development | 4.61E-02 |
| 114 | GO:0009813: flavonoid biosynthetic process | 4.77E-02 |
| 115 | GO:0010218: response to far red light | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 4 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 5 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 6 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 7 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 8 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 9 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 10 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 11 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 12 | GO:0051060: pullulanase activity | 0.00E+00 |
| 13 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 14 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 15 | GO:0019843: rRNA binding | 3.22E-15 |
| 16 | GO:0003735: structural constituent of ribosome | 7.84E-10 |
| 17 | GO:0005528: FK506 binding | 7.45E-08 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.59E-06 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.68E-05 |
| 20 | GO:0009374: biotin binding | 2.94E-04 |
| 21 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.94E-04 |
| 22 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.94E-04 |
| 23 | GO:0004856: xylulokinase activity | 2.94E-04 |
| 24 | GO:0047746: chlorophyllase activity | 6.45E-04 |
| 25 | GO:0042389: omega-3 fatty acid desaturase activity | 6.45E-04 |
| 26 | GO:0010297: heteropolysaccharide binding | 6.45E-04 |
| 27 | GO:0003839: gamma-glutamylcyclotransferase activity | 6.45E-04 |
| 28 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.45E-04 |
| 29 | GO:0052832: inositol monophosphate 3-phosphatase activity | 6.45E-04 |
| 30 | GO:0033201: alpha-1,4-glucan synthase activity | 6.45E-04 |
| 31 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.45E-04 |
| 32 | GO:0008934: inositol monophosphate 1-phosphatase activity | 6.45E-04 |
| 33 | GO:0052833: inositol monophosphate 4-phosphatase activity | 6.45E-04 |
| 34 | GO:0018708: thiol S-methyltransferase activity | 6.45E-04 |
| 35 | GO:0008967: phosphoglycolate phosphatase activity | 6.45E-04 |
| 36 | GO:0016630: protochlorophyllide reductase activity | 6.45E-04 |
| 37 | GO:0031072: heat shock protein binding | 8.98E-04 |
| 38 | GO:0004751: ribose-5-phosphate isomerase activity | 1.04E-03 |
| 39 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 1.04E-03 |
| 40 | GO:0071917: triose-phosphate transmembrane transporter activity | 1.04E-03 |
| 41 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.04E-03 |
| 42 | GO:0004373: glycogen (starch) synthase activity | 1.04E-03 |
| 43 | GO:0002161: aminoacyl-tRNA editing activity | 1.04E-03 |
| 44 | GO:0031409: pigment binding | 1.25E-03 |
| 45 | GO:0016149: translation release factor activity, codon specific | 1.50E-03 |
| 46 | GO:0008097: 5S rRNA binding | 1.50E-03 |
| 47 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.50E-03 |
| 48 | GO:0019201: nucleotide kinase activity | 1.50E-03 |
| 49 | GO:0016851: magnesium chelatase activity | 1.50E-03 |
| 50 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.72E-03 |
| 51 | GO:0015120: phosphoglycerate transmembrane transporter activity | 2.01E-03 |
| 52 | GO:0045430: chalcone isomerase activity | 2.01E-03 |
| 53 | GO:0009011: starch synthase activity | 2.01E-03 |
| 54 | GO:0003989: acetyl-CoA carboxylase activity | 2.56E-03 |
| 55 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.56E-03 |
| 56 | GO:0003959: NADPH dehydrogenase activity | 2.56E-03 |
| 57 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.74E-03 |
| 58 | GO:0004556: alpha-amylase activity | 3.16E-03 |
| 59 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.16E-03 |
| 60 | GO:0004332: fructose-bisphosphate aldolase activity | 3.16E-03 |
| 61 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.16E-03 |
| 62 | GO:0048038: quinone binding | 3.38E-03 |
| 63 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.81E-03 |
| 64 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.81E-03 |
| 65 | GO:0004017: adenylate kinase activity | 3.81E-03 |
| 66 | GO:0016168: chlorophyll binding | 5.16E-03 |
| 67 | GO:0004525: ribonuclease III activity | 5.21E-03 |
| 68 | GO:0004033: aldo-keto reductase (NADP) activity | 5.21E-03 |
| 69 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.98E-03 |
| 70 | GO:0003747: translation release factor activity | 6.77E-03 |
| 71 | GO:0004222: metalloendopeptidase activity | 7.03E-03 |
| 72 | GO:0005384: manganese ion transmembrane transporter activity | 7.60E-03 |
| 73 | GO:0016491: oxidoreductase activity | 8.41E-03 |
| 74 | GO:0030234: enzyme regulator activity | 8.48E-03 |
| 75 | GO:0008047: enzyme activator activity | 8.48E-03 |
| 76 | GO:0047372: acylglycerol lipase activity | 9.38E-03 |
| 77 | GO:0000049: tRNA binding | 1.03E-02 |
| 78 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.13E-02 |
| 79 | GO:0015095: magnesium ion transmembrane transporter activity | 1.13E-02 |
| 80 | GO:0043621: protein self-association | 1.13E-02 |
| 81 | GO:0008168: methyltransferase activity | 1.19E-02 |
| 82 | GO:0008266: poly(U) RNA binding | 1.23E-02 |
| 83 | GO:0051536: iron-sulfur cluster binding | 1.55E-02 |
| 84 | GO:0051082: unfolded protein binding | 2.01E-02 |
| 85 | GO:0003727: single-stranded RNA binding | 2.14E-02 |
| 86 | GO:0047134: protein-disulfide reductase activity | 2.27E-02 |
| 87 | GO:0004812: aminoacyl-tRNA ligase activity | 2.27E-02 |
| 88 | GO:0003723: RNA binding | 2.47E-02 |
| 89 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.59E-02 |
| 90 | GO:0050662: coenzyme binding | 2.66E-02 |
| 91 | GO:0004791: thioredoxin-disulfide reductase activity | 2.66E-02 |
| 92 | GO:0005355: glucose transmembrane transporter activity | 2.66E-02 |
| 93 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.22E-02 |
| 94 | GO:0051015: actin filament binding | 3.22E-02 |
| 95 | GO:0016791: phosphatase activity | 3.37E-02 |
| 96 | GO:0005525: GTP binding | 3.39E-02 |
| 97 | GO:0008237: metallopeptidase activity | 3.51E-02 |
| 98 | GO:0016597: amino acid binding | 3.66E-02 |
| 99 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 3 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 2.22E-76 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.76E-46 |
| 6 | GO:0009941: chloroplast envelope | 2.55E-40 |
| 7 | GO:0009534: chloroplast thylakoid | 3.68E-36 |
| 8 | GO:0009570: chloroplast stroma | 1.12E-34 |
| 9 | GO:0009579: thylakoid | 1.29E-21 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.09E-13 |
| 11 | GO:0005840: ribosome | 4.84E-13 |
| 12 | GO:0031977: thylakoid lumen | 6.04E-13 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.89E-09 |
| 14 | GO:0031969: chloroplast membrane | 1.19E-08 |
| 15 | GO:0010287: plastoglobule | 1.16E-05 |
| 16 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.30E-04 |
| 17 | GO:0009515: granal stacked thylakoid | 2.94E-04 |
| 18 | GO:0009547: plastid ribosome | 2.94E-04 |
| 19 | GO:0010319: stromule | 5.21E-04 |
| 20 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 6.45E-04 |
| 21 | GO:0030095: chloroplast photosystem II | 1.01E-03 |
| 22 | GO:0010007: magnesium chelatase complex | 1.04E-03 |
| 23 | GO:0009317: acetyl-CoA carboxylase complex | 1.04E-03 |
| 24 | GO:0030076: light-harvesting complex | 1.13E-03 |
| 25 | GO:0005960: glycine cleavage complex | 1.50E-03 |
| 26 | GO:0042651: thylakoid membrane | 1.53E-03 |
| 27 | GO:0009654: photosystem II oxygen evolving complex | 1.53E-03 |
| 28 | GO:0015935: small ribosomal subunit | 1.68E-03 |
| 29 | GO:0009544: chloroplast ATP synthase complex | 2.01E-03 |
| 30 | GO:0009523: photosystem II | 3.16E-03 |
| 31 | GO:0019898: extrinsic component of membrane | 3.16E-03 |
| 32 | GO:0009840: chloroplastic endopeptidase Clp complex | 3.81E-03 |
| 33 | GO:0009533: chloroplast stromal thylakoid | 4.49E-03 |
| 34 | GO:0009501: amyloplast | 5.21E-03 |
| 35 | GO:0009707: chloroplast outer membrane | 6.37E-03 |
| 36 | GO:0005763: mitochondrial small ribosomal subunit | 6.77E-03 |
| 37 | GO:0009536: plastid | 7.32E-03 |
| 38 | GO:0015934: large ribosomal subunit | 7.37E-03 |
| 39 | GO:0000311: plastid large ribosomal subunit | 1.03E-02 |
| 40 | GO:0032040: small-subunit processome | 1.03E-02 |
| 41 | GO:0016020: membrane | 1.10E-02 |
| 42 | GO:0009532: plastid stroma | 1.78E-02 |
| 43 | GO:0009706: chloroplast inner membrane | 2.01E-02 |
| 44 | GO:0015629: actin cytoskeleton | 2.02E-02 |
| 45 | GO:0005623: cell | 2.59E-02 |
| 46 | GO:0009522: photosystem I | 2.66E-02 |