co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G03410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006907: pinocytosis	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0000819: sister chromatid segregation	0.00E+00
4	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
5	GO:0048497: maintenance of floral organ identity	1.03E-04
6	GO:0051013: microtubule severing	3.19E-04
7	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.19E-04
8	GO:0006438: valyl-tRNA aminoacylation	3.19E-04
9	GO:0032958: inositol phosphate biosynthetic process	3.19E-04
10	GO:0006426: glycyl-tRNA aminoacylation	3.19E-04
11	GO:0010024: phytochromobilin biosynthetic process	6.97E-04
12	GO:0061062: regulation of nematode larval development	6.97E-04
13	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.09E-03
14	GO:0048575: short-day photoperiodism, flowering	1.13E-03
15	GO:0090506: axillary shoot meristem initiation	1.13E-03
16	GO:0009825: multidimensional cell growth	1.26E-03
17	GO:0010321: regulation of vegetative phase change	1.62E-03
18	GO:0006020: inositol metabolic process	1.62E-03
19	GO:0051513: regulation of monopolar cell growth	1.62E-03
20	GO:0007276: gamete generation	1.62E-03
21	GO:0010088: phloem development	1.62E-03
22	GO:0051301: cell division	1.83E-03
23	GO:0009956: radial pattern formation	2.18E-03
24	GO:0048629: trichome patterning	2.18E-03
25	GO:0042991: transcription factor import into nucleus	2.18E-03
26	GO:0009686: gibberellin biosynthetic process	2.25E-03
27	GO:0010091: trichome branching	2.45E-03
28	GO:0042127: regulation of cell proliferation	2.45E-03
29	GO:0007094: mitotic spindle assembly checkpoint	2.78E-03
30	GO:0048359: mucilage metabolic process involved in seed coat development	2.78E-03
31	GO:0010942: positive regulation of cell death	3.43E-03
32	GO:0016554: cytidine to uridine editing	3.43E-03
33	GO:0009913: epidermal cell differentiation	3.43E-03
34	GO:1902456: regulation of stomatal opening	3.43E-03
35	GO:0048825: cotyledon development	3.56E-03
36	GO:0010583: response to cyclopentenone	4.06E-03
37	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	4.13E-03
38	GO:0010019: chloroplast-nucleus signaling pathway	4.13E-03
39	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.87E-03
40	GO:0000712: resolution of meiotic recombination intermediates	4.87E-03
41	GO:0045995: regulation of embryonic development	4.87E-03
42	GO:1900056: negative regulation of leaf senescence	4.87E-03
43	GO:0000082: G1/S transition of mitotic cell cycle	4.87E-03
44	GO:0010444: guard mother cell differentiation	4.87E-03
45	GO:0010492: maintenance of shoot apical meristem identity	5.66E-03
46	GO:0071555: cell wall organization	6.22E-03
47	GO:0007186: G-protein coupled receptor signaling pathway	6.49E-03
48	GO:0048589: developmental growth	7.36E-03
49	GO:0009056: catabolic process	7.36E-03
50	GO:0010332: response to gamma radiation	7.36E-03
51	GO:0006811: ion transport	7.93E-03
52	GO:1900865: chloroplast RNA modification	8.27E-03
53	GO:0007346: regulation of mitotic cell cycle	8.27E-03
54	GO:0009641: shade avoidance	9.22E-03
55	GO:0006949: syncytium formation	9.22E-03
56	GO:0006259: DNA metabolic process	9.22E-03
57	GO:0010192: mucilage biosynthetic process	9.22E-03
58	GO:0006782: protoporphyrinogen IX biosynthetic process	9.22E-03
59	GO:0008285: negative regulation of cell proliferation	1.02E-02
60	GO:0006265: DNA topological change	1.02E-02
61	GO:0009750: response to fructose	1.02E-02
62	GO:0030001: metal ion transport	1.04E-02
63	GO:0006312: mitotic recombination	1.12E-02
64	GO:0012501: programmed cell death	1.12E-02
65	GO:0005983: starch catabolic process	1.12E-02
66	GO:0010152: pollen maturation	1.12E-02
67	GO:0009744: response to sucrose	1.18E-02
68	GO:0006351: transcription, DNA-templated	1.21E-02
69	GO:0010102: lateral root morphogenesis	1.23E-02
70	GO:0030048: actin filament-based movement	1.23E-02
71	GO:0042546: cell wall biogenesis	1.23E-02
72	GO:0010223: secondary shoot formation	1.34E-02
73	GO:0009887: animal organ morphogenesis	1.34E-02
74	GO:0010540: basipetal auxin transport	1.34E-02
75	GO:0006302: double-strand break repair	1.34E-02
76	GO:0048768: root hair cell tip growth	1.34E-02
77	GO:0009933: meristem structural organization	1.34E-02
78	GO:0010207: photosystem II assembly	1.34E-02
79	GO:0007034: vacuolar transport	1.34E-02
80	GO:0009734: auxin-activated signaling pathway	1.37E-02
81	GO:0009664: plant-type cell wall organization	1.48E-02
82	GO:0006468: protein phosphorylation	1.50E-02
83	GO:0006863: purine nucleobase transport	1.57E-02
84	GO:0009736: cytokinin-activated signaling pathway	1.59E-02
85	GO:0048366: leaf development	1.79E-02
86	GO:0019953: sexual reproduction	1.81E-02
87	GO:0006418: tRNA aminoacylation for protein translation	1.81E-02
88	GO:0006874: cellular calcium ion homeostasis	1.81E-02
89	GO:0043622: cortical microtubule organization	1.81E-02
90	GO:0009416: response to light stimulus	1.94E-02
91	GO:0051321: meiotic cell cycle	1.94E-02
92	GO:0009740: gibberellic acid mediated signaling pathway	2.14E-02
93	GO:0001944: vasculature development	2.20E-02
94	GO:0009733: response to auxin	2.31E-02
95	GO:0048443: stamen development	2.33E-02
96	GO:0051726: regulation of cell cycle	2.41E-02
97	GO:0010118: stomatal movement	2.61E-02
98	GO:0000226: microtubule cytoskeleton organization	2.61E-02
99	GO:0000271: polysaccharide biosynthetic process	2.61E-02
100	GO:0009741: response to brassinosteroid	2.75E-02
101	GO:0045489: pectin biosynthetic process	2.75E-02
102	GO:0010305: leaf vascular tissue pattern formation	2.75E-02
103	GO:0009958: positive gravitropism	2.75E-02
104	GO:0007018: microtubule-based movement	2.90E-02
105	GO:0007059: chromosome segregation	2.90E-02
106	GO:0009749: response to glucose	3.05E-02
107	GO:0071554: cell wall organization or biogenesis	3.20E-02
108	GO:0002229: defense response to oomycetes	3.20E-02
109	GO:0032502: developmental process	3.35E-02
110	GO:0016310: phosphorylation	3.45E-02
111	GO:0030163: protein catabolic process	3.51E-02
112	GO:0009828: plant-type cell wall loosening	3.67E-02
113	GO:0019760: glucosinolate metabolic process	3.67E-02
114	GO:0040008: regulation of growth	3.74E-02
115	GO:0051607: defense response to virus	3.99E-02
116	GO:0000910: cytokinesis	3.99E-02
117	GO:0016126: sterol biosynthetic process	4.16E-02
118	GO:0007166: cell surface receptor signaling pathway	4.47E-02
119	GO:0015995: chlorophyll biosynthetic process	4.67E-02
120	GO:0010411: xyloglucan metabolic process	4.67E-02
121	GO:0048573: photoperiodism, flowering	4.67E-02
122	GO:0016311: dephosphorylation	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
5	GO:0071633: dihydroceramidase activity	0.00E+00
6	GO:0004820: glycine-tRNA ligase activity	3.19E-04
7	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	3.19E-04
8	GO:0000829: inositol heptakisphosphate kinase activity	3.19E-04
9	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	3.19E-04
10	GO:0000828: inositol hexakisphosphate kinase activity	3.19E-04
11	GO:0008568: microtubule-severing ATPase activity	3.19E-04
12	GO:0004832: valine-tRNA ligase activity	3.19E-04
13	GO:0010296: prenylcysteine methylesterase activity	6.97E-04
14	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.97E-04
15	GO:0004109: coproporphyrinogen oxidase activity	6.97E-04
16	GO:0019156: isoamylase activity	6.97E-04
17	GO:0045544: gibberellin 20-oxidase activity	1.62E-03
18	GO:0003916: DNA topoisomerase activity	1.62E-03
19	GO:0010011: auxin binding	2.18E-03
20	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.18E-03
21	GO:0004930: G-protein coupled receptor activity	2.18E-03
22	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	3.08E-03
23	GO:0016853: isomerase activity	3.32E-03
24	GO:0004556: alpha-amylase activity	3.43E-03
25	GO:0003779: actin binding	4.00E-03
26	GO:0016832: aldehyde-lyase activity	4.13E-03
27	GO:0051753: mannan synthase activity	4.13E-03
28	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	6.49E-03
29	GO:0004722: protein serine/threonine phosphatase activity	6.85E-03
30	GO:0009055: electron carrier activity	9.10E-03
31	GO:0043565: sequence-specific DNA binding	1.19E-02
32	GO:0003725: double-stranded RNA binding	1.23E-02
33	GO:0003774: motor activity	1.34E-02
34	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.34E-02
35	GO:0004190: aspartic-type endopeptidase activity	1.45E-02
36	GO:0005217: intracellular ligand-gated ion channel activity	1.45E-02
37	GO:0003712: transcription cofactor activity	1.45E-02
38	GO:0004970: ionotropic glutamate receptor activity	1.45E-02
39	GO:0003777: microtubule motor activity	1.76E-02
40	GO:0005345: purine nucleobase transmembrane transporter activity	1.81E-02
41	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.93E-02
42	GO:0008408: 3'-5' exonuclease activity	1.94E-02
43	GO:0008094: DNA-dependent ATPase activity	1.94E-02
44	GO:0033612: receptor serine/threonine kinase binding	1.94E-02
45	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.07E-02
46	GO:0052689: carboxylic ester hydrolase activity	2.17E-02
47	GO:0030570: pectate lyase activity	2.20E-02
48	GO:0004812: aminoacyl-tRNA ligase activity	2.47E-02
49	GO:0004674: protein serine/threonine kinase activity	2.52E-02
50	GO:0042803: protein homodimerization activity	2.54E-02
51	GO:0001085: RNA polymerase II transcription factor binding	2.75E-02
52	GO:0046983: protein dimerization activity	3.09E-02
53	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.20E-02
54	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.24E-02
55	GO:0004518: nuclease activity	3.35E-02
56	GO:0003677: DNA binding	3.39E-02
57	GO:0004519: endonuclease activity	3.45E-02
58	GO:0000156: phosphorelay response regulator activity	3.51E-02
59	GO:0004672: protein kinase activity	3.61E-02
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.65E-02
61	GO:0016791: phosphatase activity	3.67E-02
62	GO:0005200: structural constituent of cytoskeleton	3.83E-02
63	GO:0016413: O-acetyltransferase activity	3.99E-02
64	GO:0008017: microtubule binding	4.10E-02
65	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.67E-02
66	GO:0004721: phosphoprotein phosphatase activity	4.67E-02
67	GO:0008236: serine-type peptidase activity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	3.19E-04
3	GO:0009569: chloroplast starch grain	6.97E-04
4	GO:0030870: Mre11 complex	6.97E-04
5	GO:0009531: secondary cell wall	1.62E-03
6	GO:0005828: kinetochore microtubule	2.18E-03
7	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.18E-03
8	GO:0000795: synaptonemal complex	2.78E-03
9	GO:0000776: kinetochore	2.78E-03
10	GO:0000793: condensed chromosome	3.43E-03
11	GO:0000815: ESCRT III complex	4.13E-03
12	GO:0010369: chromocenter	4.13E-03
13	GO:0000777: condensed chromosome kinetochore	4.13E-03
14	GO:0000794: condensed nuclear chromosome	4.87E-03
15	GO:0005876: spindle microtubule	8.27E-03
16	GO:0016459: myosin complex	9.22E-03
17	GO:0046658: anchored component of plasma membrane	1.19E-02
18	GO:0009508: plastid chromosome	1.23E-02
19	GO:0005875: microtubule associated complex	1.57E-02
20	GO:0005874: microtubule	1.83E-02
21	GO:0015629: actin cytoskeleton	2.20E-02
22	GO:0005871: kinesin complex	2.47E-02
23	GO:0009504: cell plate	3.05E-02
24	GO:0005886: plasma membrane	3.20E-02
25	GO:0000785: chromatin	3.35E-02
26	GO:0031225: anchored component of membrane	3.74E-02
27	GO:0009295: nucleoid	3.83E-02
28	GO:0005667: transcription factor complex	4.50E-02