co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G03270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
5	GO:0032206: positive regulation of telomere maintenance	0.00E+00
6	GO:0046486: glycerolipid metabolic process	0.00E+00
7	GO:0006907: pinocytosis	0.00E+00
8	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
9	GO:0009451: RNA modification	6.04E-07
10	GO:0009793: embryo development ending in seed dormancy	3.13E-04
11	GO:0051013: microtubule severing	3.57E-04
12	GO:0034757: negative regulation of iron ion transport	3.57E-04
13	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	3.57E-04
14	GO:0009958: positive gravitropism	4.12E-04
15	GO:1900865: chloroplast RNA modification	6.80E-04
16	GO:0043039: tRNA aminoacylation	7.77E-04
17	GO:0006650: glycerophospholipid metabolic process	7.77E-04
18	GO:0010271: regulation of chlorophyll catabolic process	7.77E-04
19	GO:0001736: establishment of planar polarity	7.77E-04
20	GO:0010582: floral meristem determinacy	1.04E-03
21	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.26E-03
22	GO:0045910: negative regulation of DNA recombination	1.26E-03
23	GO:0046168: glycerol-3-phosphate catabolic process	1.26E-03
24	GO:0080117: secondary growth	1.26E-03
25	GO:0006518: peptide metabolic process	1.26E-03
26	GO:0042780: tRNA 3'-end processing	1.26E-03
27	GO:0045493: xylan catabolic process	1.26E-03
28	GO:0030029: actin filament-based process	1.26E-03
29	GO:0009825: multidimensional cell growth	1.49E-03
30	GO:0009102: biotin biosynthetic process	1.81E-03
31	GO:0010239: chloroplast mRNA processing	1.81E-03
32	GO:0044211: CTP salvage	1.81E-03
33	GO:0007276: gamete generation	1.81E-03
34	GO:0006072: glycerol-3-phosphate metabolic process	1.81E-03
35	GO:0009800: cinnamic acid biosynthetic process	1.81E-03
36	GO:2000904: regulation of starch metabolic process	1.81E-03
37	GO:0045017: glycerolipid biosynthetic process	1.81E-03
38	GO:0009926: auxin polar transport	2.24E-03
39	GO:0044206: UMP salvage	2.44E-03
40	GO:0006021: inositol biosynthetic process	2.44E-03
41	GO:0009956: radial pattern formation	2.44E-03
42	GO:0010158: abaxial cell fate specification	3.11E-03
43	GO:0009696: salicylic acid metabolic process	3.11E-03
44	GO:0016554: cytidine to uridine editing	3.85E-03
45	GO:0006559: L-phenylalanine catabolic process	3.85E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	3.85E-03
47	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.85E-03
48	GO:0042793: transcription from plastid promoter	3.85E-03
49	GO:0048831: regulation of shoot system development	3.85E-03
50	GO:0003006: developmental process involved in reproduction	3.85E-03
51	GO:0009658: chloroplast organization	4.22E-03
52	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	4.64E-03
53	GO:0009942: longitudinal axis specification	4.64E-03
54	GO:0048509: regulation of meristem development	4.64E-03
55	GO:0010583: response to cyclopentenone	4.81E-03
56	GO:0009734: auxin-activated signaling pathway	5.02E-03
57	GO:0009610: response to symbiotic fungus	5.48E-03
58	GO:0010050: vegetative phase change	5.48E-03
59	GO:0010098: suspensor development	5.48E-03
60	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.48E-03
61	GO:0009850: auxin metabolic process	6.37E-03
62	GO:0010492: maintenance of shoot apical meristem identity	6.37E-03
63	GO:0000105: histidine biosynthetic process	6.37E-03
64	GO:0009231: riboflavin biosynthetic process	6.37E-03
65	GO:0009627: systemic acquired resistance	7.28E-03
66	GO:0071482: cellular response to light stimulus	7.30E-03
67	GO:0007186: G-protein coupled receptor signaling pathway	7.30E-03
68	GO:0009657: plastid organization	7.30E-03
69	GO:0019430: removal of superoxide radicals	7.30E-03
70	GO:0032544: plastid translation	7.30E-03
71	GO:0007389: pattern specification process	7.30E-03
72	GO:0009416: response to light stimulus	7.52E-03
73	GO:0010411: xyloglucan metabolic process	7.67E-03
74	GO:0048507: meristem development	8.29E-03
75	GO:0046916: cellular transition metal ion homeostasis	8.29E-03
76	GO:0000373: Group II intron splicing	8.29E-03
77	GO:0048589: developmental growth	8.29E-03
78	GO:0000160: phosphorelay signal transduction system	8.94E-03
79	GO:0009832: plant-type cell wall biogenesis	8.94E-03
80	GO:0000723: telomere maintenance	9.31E-03
81	GO:0016571: histone methylation	9.31E-03
82	GO:0016573: histone acetylation	9.31E-03
83	GO:0010192: mucilage biosynthetic process	1.04E-02
84	GO:0006782: protoporphyrinogen IX biosynthetic process	1.04E-02
85	GO:0006535: cysteine biosynthetic process from serine	1.04E-02
86	GO:0048829: root cap development	1.04E-02
87	GO:0006298: mismatch repair	1.04E-02
88	GO:0009089: lysine biosynthetic process via diaminopimelate	1.15E-02
89	GO:0016485: protein processing	1.15E-02
90	GO:0048765: root hair cell differentiation	1.15E-02
91	GO:0030001: metal ion transport	1.23E-02
92	GO:0006790: sulfur compound metabolic process	1.27E-02
93	GO:0005983: starch catabolic process	1.27E-02
94	GO:0045037: protein import into chloroplast stroma	1.27E-02
95	GO:0010152: pollen maturation	1.27E-02
96	GO:0010540: basipetal auxin transport	1.51E-02
97	GO:0009266: response to temperature stimulus	1.51E-02
98	GO:0048467: gynoecium development	1.51E-02
99	GO:0010020: chloroplast fission	1.51E-02
100	GO:0009933: meristem structural organization	1.51E-02
101	GO:0009887: animal organ morphogenesis	1.51E-02
102	GO:0009636: response to toxic substance	1.57E-02
103	GO:0009965: leaf morphogenesis	1.57E-02
104	GO:0080188: RNA-directed DNA methylation	1.64E-02
105	GO:0046854: phosphatidylinositol phosphorylation	1.64E-02
106	GO:0006863: purine nucleobase transport	1.77E-02
107	GO:0009833: plant-type primary cell wall biogenesis	1.77E-02
108	GO:0006364: rRNA processing	1.89E-02
109	GO:0009736: cytokinin-activated signaling pathway	1.89E-02
110	GO:0019344: cysteine biosynthetic process	1.90E-02
111	GO:0006338: chromatin remodeling	1.90E-02
112	GO:0006418: tRNA aminoacylation for protein translation	2.04E-02
113	GO:0006874: cellular calcium ion homeostasis	2.04E-02
114	GO:0043622: cortical microtubule organization	2.04E-02
115	GO:0006306: DNA methylation	2.18E-02
116	GO:0003333: amino acid transmembrane transport	2.18E-02
117	GO:0016226: iron-sulfur cluster assembly	2.33E-02
118	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.46E-02
119	GO:0071215: cellular response to abscisic acid stimulus	2.48E-02
120	GO:0009686: gibberellin biosynthetic process	2.48E-02
121	GO:0048443: stamen development	2.63E-02
122	GO:0010091: trichome branching	2.63E-02
123	GO:0042127: regulation of cell proliferation	2.63E-02
124	GO:0009624: response to nematode	2.69E-02
125	GO:0016117: carotenoid biosynthetic process	2.79E-02
126	GO:0070417: cellular response to cold	2.79E-02
127	GO:0048653: anther development	2.95E-02
128	GO:0000226: microtubule cytoskeleton organization	2.95E-02
129	GO:0000271: polysaccharide biosynthetic process	2.95E-02
130	GO:0010087: phloem or xylem histogenesis	2.95E-02
131	GO:0009733: response to auxin	3.07E-02
132	GO:0045489: pectin biosynthetic process	3.11E-02
133	GO:0010305: leaf vascular tissue pattern formation	3.11E-02
134	GO:0048868: pollen tube development	3.11E-02
135	GO:0007018: microtubule-based movement	3.27E-02
136	GO:0008654: phospholipid biosynthetic process	3.44E-02
137	GO:0009058: biosynthetic process	3.55E-02
138	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.61E-02
139	GO:0002229: defense response to oomycetes	3.61E-02
140	GO:0031047: gene silencing by RNA	3.78E-02
141	GO:0019760: glucosinolate metabolic process	4.14E-02
142	GO:0010252: auxin homeostasis	4.14E-02
143	GO:0009639: response to red or far red light	4.14E-02
144	GO:0006633: fatty acid biosynthetic process	4.22E-02
145	GO:0000910: cytokinesis	4.50E-02
146	GO:0016126: sterol biosynthetic process	4.69E-02
147	GO:0006810: transport	4.76E-02
148	GO:0010029: regulation of seed germination	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0004401: histidinol-phosphatase activity	0.00E+00
4	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
5	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
6	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
7	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
8	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
9	GO:0004519: endonuclease activity	4.26E-06
10	GO:0010011: auxin binding	7.90E-05
11	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	3.57E-04
12	GO:0008836: diaminopimelate decarboxylase activity	3.57E-04
13	GO:0004831: tyrosine-tRNA ligase activity	3.57E-04
14	GO:0008568: microtubule-severing ATPase activity	3.57E-04
15	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	3.57E-04
16	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.57E-04
17	GO:0004047: aminomethyltransferase activity	7.77E-04
18	GO:0052832: inositol monophosphate 3-phosphatase activity	7.77E-04
19	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	7.77E-04
20	GO:0004109: coproporphyrinogen oxidase activity	7.77E-04
21	GO:0008805: carbon-monoxide oxygenase activity	7.77E-04
22	GO:0008934: inositol monophosphate 1-phosphatase activity	7.77E-04
23	GO:0052833: inositol monophosphate 4-phosphatase activity	7.77E-04
24	GO:0050736: O-malonyltransferase activity	7.77E-04
25	GO:0009884: cytokinin receptor activity	7.77E-04
26	GO:0019156: isoamylase activity	7.77E-04
27	GO:0050017: L-3-cyanoalanine synthase activity	7.77E-04
28	GO:0003723: RNA binding	9.70E-04
29	GO:0045548: phenylalanine ammonia-lyase activity	1.26E-03
30	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.26E-03
31	GO:0005034: osmosensor activity	1.26E-03
32	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.26E-03
33	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.26E-03
34	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.26E-03
35	GO:0043047: single-stranded telomeric DNA binding	1.81E-03
36	GO:0080031: methyl salicylate esterase activity	1.81E-03
37	GO:0004845: uracil phosphoribosyltransferase activity	2.44E-03
38	GO:0010328: auxin influx transmembrane transporter activity	2.44E-03
39	GO:0004930: G-protein coupled receptor activity	2.44E-03
40	GO:0009044: xylan 1,4-beta-xylosidase activity	2.44E-03
41	GO:0046556: alpha-L-arabinofuranosidase activity	2.44E-03
42	GO:0005471: ATP:ADP antiporter activity	3.11E-03
43	GO:0030983: mismatched DNA binding	3.85E-03
44	GO:0080030: methyl indole-3-acetate esterase activity	3.85E-03
45	GO:0004784: superoxide dismutase activity	3.85E-03
46	GO:0004556: alpha-amylase activity	3.85E-03
47	GO:0004462: lactoylglutathione lyase activity	3.85E-03
48	GO:0004124: cysteine synthase activity	4.64E-03
49	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.64E-03
50	GO:0004849: uridine kinase activity	4.64E-03
51	GO:0019900: kinase binding	4.64E-03
52	GO:0042162: telomeric DNA binding	5.48E-03
53	GO:0046914: transition metal ion binding	7.30E-03
54	GO:0009672: auxin:proton symporter activity	9.31E-03
55	GO:0004222: metalloendopeptidase activity	9.39E-03
56	GO:0004673: protein histidine kinase activity	1.04E-02
57	GO:0009982: pseudouridine synthase activity	1.39E-02
58	GO:0010329: auxin efflux transmembrane transporter activity	1.39E-02
59	GO:0000155: phosphorelay sensor kinase activity	1.39E-02
60	GO:0043621: protein self-association	1.51E-02
61	GO:0005217: intracellular ligand-gated ion channel activity	1.64E-02
62	GO:0008061: chitin binding	1.64E-02
63	GO:0004970: ionotropic glutamate receptor activity	1.64E-02
64	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.77E-02
65	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.77E-02
66	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.77E-02
67	GO:0005525: GTP binding	1.78E-02
68	GO:0004857: enzyme inhibitor activity	1.90E-02
69	GO:0008134: transcription factor binding	1.90E-02
70	GO:0043424: protein histidine kinase binding	2.04E-02
71	GO:0005345: purine nucleobase transmembrane transporter activity	2.04E-02
72	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.33E-02
73	GO:0016301: kinase activity	2.44E-02
74	GO:0030570: pectate lyase activity	2.48E-02
75	GO:0016760: cellulose synthase (UDP-forming) activity	2.48E-02
76	GO:0003779: actin binding	2.61E-02
77	GO:0004812: aminoacyl-tRNA ligase activity	2.79E-02
78	GO:0004871: signal transducer activity	3.14E-02
79	GO:0010181: FMN binding	3.27E-02
80	GO:0016740: transferase activity	3.34E-02
81	GO:0019843: rRNA binding	3.37E-02
82	GO:0019901: protein kinase binding	3.44E-02
83	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.61E-02
84	GO:0030170: pyridoxal phosphate binding	3.73E-02
85	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.75E-02
86	GO:0000156: phosphorelay response regulator activity	3.96E-02
87	GO:0003684: damaged DNA binding	4.14E-02
88	GO:0016759: cellulose synthase activity	4.14E-02
89	GO:0008483: transaminase activity	4.32E-02
90	GO:0008237: metallopeptidase activity	4.32E-02
91	GO:0005200: structural constituent of cytoskeleton	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0009537: proplastid	0.00E+00
3	GO:0009349: riboflavin synthase complex	0.00E+00
4	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
5	GO:0009507: chloroplast	3.37E-06
6	GO:0009707: chloroplast outer membrane	1.50E-04
7	GO:0042644: chloroplast nucleoid	5.76E-04
8	GO:0009569: chloroplast starch grain	7.77E-04
9	GO:0005697: telomerase holoenzyme complex	7.77E-04
10	GO:0009513: etioplast	7.77E-04
11	GO:0009509: chromoplast	1.26E-03
12	GO:0009570: chloroplast stroma	1.26E-03
13	GO:0042646: plastid nucleoid	1.81E-03
14	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.81E-03
15	GO:0009986: cell surface	5.48E-03
16	GO:0009295: nucleoid	5.80E-03
17	GO:0009501: amyloplast	6.37E-03
18	GO:0000784: nuclear chromosome, telomeric region	7.30E-03
19	GO:0016602: CCAAT-binding factor complex	1.39E-02
20	GO:0009508: plastid chromosome	1.39E-02
21	GO:0000419: DNA-directed RNA polymerase V complex	1.77E-02
22	GO:0005871: kinesin complex	2.79E-02
23	GO:0005739: mitochondrion	3.39E-02
24	GO:0031965: nuclear membrane	3.44E-02
25	GO:0010319: stromule	4.32E-02