co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
3	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
4	GO:0018063: cytochrome c-heme linkage	0.00E+00
5	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
6	GO:0051553: flavone biosynthetic process	0.00E+00
7	GO:0072722: response to amitrole	0.00E+00
8	GO:0051607: defense response to virus	2.95E-05
9	GO:0009620: response to fungus	3.79E-05
10	GO:0071669: plant-type cell wall organization or biogenesis	1.77E-04
11	GO:1900057: positive regulation of leaf senescence	1.77E-04
12	GO:0009617: response to bacterium	2.16E-04
13	GO:0042742: defense response to bacterium	2.24E-04
14	GO:0019567: arabinose biosynthetic process	2.46E-04
15	GO:0010230: alternative respiration	2.46E-04
16	GO:0046246: terpene biosynthetic process	2.46E-04
17	GO:0006680: glucosylceramide catabolic process	2.46E-04
18	GO:0032107: regulation of response to nutrient levels	2.46E-04
19	GO:0010112: regulation of systemic acquired resistance	3.36E-04
20	GO:0009627: systemic acquired resistance	5.00E-04
21	GO:0050684: regulation of mRNA processing	5.44E-04
22	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	5.44E-04
23	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.44E-04
24	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.44E-04
25	GO:0040008: regulation of growth	8.78E-04
26	GO:0010325: raffinose family oligosaccharide biosynthetic process	8.83E-04
27	GO:0010272: response to silver ion	8.83E-04
28	GO:0002230: positive regulation of defense response to virus by host	8.83E-04
29	GO:0032784: regulation of DNA-templated transcription, elongation	8.83E-04
30	GO:0006556: S-adenosylmethionine biosynthetic process	8.83E-04
31	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.83E-04
32	GO:0071398: cellular response to fatty acid	8.83E-04
33	GO:0010476: gibberellin mediated signaling pathway	8.83E-04
34	GO:0010150: leaf senescence	9.41E-04
35	GO:0000162: tryptophan biosynthetic process	9.77E-04
36	GO:0051707: response to other organism	1.12E-03
37	GO:0070301: cellular response to hydrogen peroxide	1.26E-03
38	GO:0002239: response to oomycetes	1.26E-03
39	GO:1902290: positive regulation of defense response to oomycetes	1.26E-03
40	GO:0080024: indolebutyric acid metabolic process	1.26E-03
41	GO:0001676: long-chain fatty acid metabolic process	1.26E-03
42	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.26E-03
43	GO:0009636: response to toxic substance	1.30E-03
44	GO:0016998: cell wall macromolecule catabolic process	1.30E-03
45	GO:0015031: protein transport	1.42E-03
46	GO:0009651: response to salt stress	1.53E-03
47	GO:0009693: ethylene biosynthetic process	1.55E-03
48	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.68E-03
49	GO:0048830: adventitious root development	1.68E-03
50	GO:0033356: UDP-L-arabinose metabolic process	1.68E-03
51	GO:1901002: positive regulation of response to salt stress	1.68E-03
52	GO:0015867: ATP transport	1.68E-03
53	GO:0010188: response to microbial phytotoxin	1.68E-03
54	GO:0006970: response to osmotic stress	2.04E-03
55	GO:0006564: L-serine biosynthetic process	2.15E-03
56	GO:0046686: response to cadmium ion	2.22E-03
57	GO:0006623: protein targeting to vacuole	2.44E-03
58	GO:0010193: response to ozone	2.61E-03
59	GO:0006891: intra-Golgi vesicle-mediated transport	2.61E-03
60	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.65E-03
61	GO:0010256: endomembrane system organization	2.65E-03
62	GO:0009759: indole glucosinolate biosynthetic process	2.65E-03
63	GO:0015866: ADP transport	2.65E-03
64	GO:0030643: cellular phosphate ion homeostasis	3.18E-03
65	GO:0009082: branched-chain amino acid biosynthetic process	3.18E-03
66	GO:0009099: valine biosynthetic process	3.18E-03
67	GO:0048444: floral organ morphogenesis	3.18E-03
68	GO:0055114: oxidation-reduction process	3.47E-03
69	GO:0006886: intracellular protein transport	3.48E-03
70	GO:0050829: defense response to Gram-negative bacterium	3.75E-03
71	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.75E-03
72	GO:1902074: response to salt	3.75E-03
73	GO:0009816: defense response to bacterium, incompatible interaction	3.98E-03
74	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.35E-03
75	GO:0009819: drought recovery	4.35E-03
76	GO:0006605: protein targeting	4.35E-03
77	GO:0006102: isocitrate metabolic process	4.35E-03
78	GO:0009817: defense response to fungus, incompatible interaction	4.90E-03
79	GO:0010497: plasmodesmata-mediated intercellular transport	4.98E-03
80	GO:0009097: isoleucine biosynthetic process	4.98E-03
81	GO:0010204: defense response signaling pathway, resistance gene-independent	4.98E-03
82	GO:0017004: cytochrome complex assembly	4.98E-03
83	GO:0010311: lateral root formation	5.15E-03
84	GO:0009407: toxin catabolic process	5.41E-03
85	GO:0007338: single fertilization	5.65E-03
86	GO:0009056: catabolic process	5.65E-03
87	GO:0009835: fruit ripening	5.65E-03
88	GO:0048527: lateral root development	5.67E-03
89	GO:0010043: response to zinc ion	5.67E-03
90	GO:0009638: phototropism	6.33E-03
91	GO:0009098: leucine biosynthetic process	6.33E-03
92	GO:2000280: regulation of root development	6.33E-03
93	GO:0008202: steroid metabolic process	6.33E-03
94	GO:1900426: positive regulation of defense response to bacterium	6.33E-03
95	GO:0006099: tricarboxylic acid cycle	6.50E-03
96	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.06E-03
97	GO:0006032: chitin catabolic process	7.06E-03
98	GO:0009688: abscisic acid biosynthetic process	7.06E-03
99	GO:0009641: shade avoidance	7.06E-03
100	GO:0016441: posttranscriptional gene silencing	7.06E-03
101	GO:0006631: fatty acid metabolic process	7.39E-03
102	GO:0042542: response to hydrogen peroxide	7.69E-03
103	GO:0009684: indoleacetic acid biosynthetic process	7.80E-03
104	GO:0009682: induced systemic resistance	7.80E-03
105	GO:0052544: defense response by callose deposition in cell wall	7.80E-03
106	GO:0006415: translational termination	7.80E-03
107	GO:0000272: polysaccharide catabolic process	7.80E-03
108	GO:0045037: protein import into chloroplast stroma	8.58E-03
109	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.58E-03
110	GO:0071365: cellular response to auxin stimulus	8.58E-03
111	GO:0009785: blue light signaling pathway	9.38E-03
112	GO:0090351: seedling development	1.11E-02
113	GO:0009611: response to wounding	1.13E-02
114	GO:0080147: root hair cell development	1.29E-02
115	GO:0051302: regulation of cell division	1.38E-02
116	GO:0006874: cellular calcium ion homeostasis	1.38E-02
117	GO:0016114: terpenoid biosynthetic process	1.47E-02
118	GO:0030245: cellulose catabolic process	1.57E-02
119	GO:0016226: iron-sulfur cluster assembly	1.57E-02
120	GO:0006730: one-carbon metabolic process	1.57E-02
121	GO:0030433: ubiquitin-dependent ERAD pathway	1.57E-02
122	GO:0031348: negative regulation of defense response	1.57E-02
123	GO:0071456: cellular response to hypoxia	1.57E-02
124	GO:0042147: retrograde transport, endosome to Golgi	1.88E-02
125	GO:0009751: response to salicylic acid	1.89E-02
126	GO:0010118: stomatal movement	1.99E-02
127	GO:0006520: cellular amino acid metabolic process	2.09E-02
128	GO:0006662: glycerol ether metabolic process	2.09E-02
129	GO:0010182: sugar mediated signaling pathway	2.09E-02
130	GO:0046323: glucose import	2.09E-02
131	GO:0008152: metabolic process	2.18E-02
132	GO:0048544: recognition of pollen	2.21E-02
133	GO:0071554: cell wall organization or biogenesis	2.43E-02
134	GO:0002229: defense response to oomycetes	2.43E-02
135	GO:0000302: response to reactive oxygen species	2.43E-02
136	GO:0006635: fatty acid beta-oxidation	2.43E-02
137	GO:0009630: gravitropism	2.55E-02
138	GO:0071281: cellular response to iron ion	2.67E-02
139	GO:0009567: double fertilization forming a zygote and endosperm	2.79E-02
140	GO:0009734: auxin-activated signaling pathway	2.96E-02
141	GO:0006979: response to oxidative stress	3.16E-02
142	GO:0009615: response to virus	3.16E-02
143	GO:0009607: response to biotic stimulus	3.29E-02
144	GO:0016311: dephosphorylation	3.69E-02
145	GO:0030244: cellulose biosynthetic process	3.82E-02
146	GO:0008219: cell death	3.82E-02
147	GO:0009813: flavonoid biosynthetic process	3.96E-02
148	GO:0009832: plant-type cell wall biogenesis	3.96E-02
149	GO:0007568: aging	4.24E-02
150	GO:0045893: positive regulation of transcription, DNA-templated	4.66E-02
151	GO:0034599: cellular response to oxidative stress	4.66E-02
152	GO:0009409: response to cold	4.83E-02
153	GO:0006839: mitochondrial transport	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
4	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
5	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
6	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
7	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
8	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
9	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
10	GO:0102391: decanoate--CoA ligase activity	1.34E-04
11	GO:0004467: long-chain fatty acid-CoA ligase activity	1.77E-04
12	GO:0010179: IAA-Ala conjugate hydrolase activity	2.46E-04
13	GO:2001227: quercitrin binding	2.46E-04
14	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.46E-04
15	GO:0070401: NADP+ binding	2.46E-04
16	GO:0004348: glucosylceramidase activity	2.46E-04
17	GO:0015168: glycerol transmembrane transporter activity	2.46E-04
18	GO:2001147: camalexin binding	2.46E-04
19	GO:0009000: selenocysteine lyase activity	2.46E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.46E-04
21	GO:0016229: steroid dehydrogenase activity	2.46E-04
22	GO:0004617: phosphoglycerate dehydrogenase activity	5.44E-04
23	GO:0032934: sterol binding	5.44E-04
24	GO:0052691: UDP-arabinopyranose mutase activity	5.44E-04
25	GO:0050736: O-malonyltransferase activity	5.44E-04
26	GO:0010331: gibberellin binding	5.44E-04
27	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	8.83E-04
28	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	8.83E-04
29	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.83E-04
30	GO:0004478: methionine adenosyltransferase activity	8.83E-04
31	GO:0052655: L-valine transaminase activity	1.26E-03
32	GO:0005354: galactose transmembrane transporter activity	1.26E-03
33	GO:0035529: NADH pyrophosphatase activity	1.26E-03
34	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.26E-03
35	GO:0016149: translation release factor activity, codon specific	1.26E-03
36	GO:0008106: alcohol dehydrogenase (NADP+) activity	1.26E-03
37	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.26E-03
38	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.26E-03
39	GO:0052656: L-isoleucine transaminase activity	1.26E-03
40	GO:0052654: L-leucine transaminase activity	1.26E-03
41	GO:0008810: cellulase activity	1.55E-03
42	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.68E-03
43	GO:0004084: branched-chain-amino-acid transaminase activity	1.68E-03
44	GO:0016866: intramolecular transferase activity	1.68E-03
45	GO:0015145: monosaccharide transmembrane transporter activity	2.15E-03
46	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.15E-03
47	GO:0018685: alkane 1-monooxygenase activity	2.15E-03
48	GO:0047631: ADP-ribose diphosphatase activity	2.15E-03
49	GO:0030151: molybdenum ion binding	2.15E-03
50	GO:0000210: NAD+ diphosphatase activity	2.65E-03
51	GO:0015217: ADP transmembrane transporter activity	3.18E-03
52	GO:0005347: ATP transmembrane transporter activity	3.18E-03
53	GO:0004656: procollagen-proline 4-dioxygenase activity	3.18E-03
54	GO:0008237: metallopeptidase activity	3.35E-03
55	GO:0008320: protein transmembrane transporter activity	3.75E-03
56	GO:0043295: glutathione binding	3.75E-03
57	GO:0004033: aldo-keto reductase (NADP) activity	4.35E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	4.35E-03
59	GO:0004806: triglyceride lipase activity	4.43E-03
60	GO:0008142: oxysterol binding	4.98E-03
61	GO:0004630: phospholipase D activity	4.98E-03
62	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.98E-03
63	GO:0019825: oxygen binding	5.30E-03
64	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.65E-03
65	GO:0003747: translation release factor activity	5.65E-03
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.21E-03
67	GO:0045309: protein phosphorylated amino acid binding	6.33E-03
68	GO:0004568: chitinase activity	7.06E-03
69	GO:0020037: heme binding	7.14E-03
70	GO:0004364: glutathione transferase activity	7.69E-03
71	GO:0019904: protein domain specific binding	7.80E-03
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.58E-03
73	GO:0005198: structural molecule activity	9.01E-03
74	GO:0005506: iron ion binding	9.52E-03
75	GO:0051287: NAD binding	9.71E-03
76	GO:0008061: chitin binding	1.11E-02
77	GO:0003712: transcription cofactor activity	1.11E-02
78	GO:0005217: intracellular ligand-gated ion channel activity	1.11E-02
79	GO:0004970: ionotropic glutamate receptor activity	1.11E-02
80	GO:0001046: core promoter sequence-specific DNA binding	1.29E-02
81	GO:0051536: iron-sulfur cluster binding	1.29E-02
82	GO:0031418: L-ascorbic acid binding	1.29E-02
83	GO:0015035: protein disulfide oxidoreductase activity	1.59E-02
84	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.77E-02
85	GO:0003727: single-stranded RNA binding	1.77E-02
86	GO:0047134: protein-disulfide reductase activity	1.88E-02
87	GO:0030276: clathrin binding	2.09E-02
88	GO:0001085: RNA polymerase II transcription factor binding	2.09E-02
89	GO:0030170: pyridoxal phosphate binding	2.15E-02
90	GO:0004791: thioredoxin-disulfide reductase activity	2.21E-02
91	GO:0005355: glucose transmembrane transporter activity	2.21E-02
92	GO:0010181: FMN binding	2.21E-02
93	GO:0008565: protein transporter activity	2.32E-02
94	GO:0015297: antiporter activity	2.55E-02
95	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.67E-02
96	GO:0016791: phosphatase activity	2.79E-02
97	GO:0008483: transaminase activity	2.91E-02
98	GO:0016413: O-acetyltransferase activity	3.04E-02
99	GO:0016597: amino acid binding	3.04E-02
100	GO:0030247: polysaccharide binding	3.55E-02
101	GO:0000166: nucleotide binding	3.93E-02
102	GO:0015238: drug transmembrane transporter activity	3.96E-02
103	GO:0004601: peroxidase activity	4.13E-02
104	GO:0030145: manganese ion binding	4.24E-02
105	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.24E-02
106	GO:0003993: acid phosphatase activity	4.66E-02
107	GO:0050660: flavin adenine dinucleotide binding	4.76E-02
108	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.81E-02
109	GO:0050661: NADP binding	4.96E-02
110	GO:0051539: 4 iron, 4 sulfur cluster binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0030121: AP-1 adaptor complex	0.00E+00
2	GO:0005794: Golgi apparatus	6.94E-08
3	GO:0005886: plasma membrane	9.85E-06
4	GO:0017119: Golgi transport complex	1.73E-05
5	GO:0045252: oxoglutarate dehydrogenase complex	2.46E-04
6	GO:0016021: integral component of membrane	7.12E-04
7	GO:0030658: transport vesicle membrane	1.26E-03
8	GO:0005783: endoplasmic reticulum	1.61E-03
9	GO:0009506: plasmodesma	1.98E-03
10	GO:0005829: cytosol	2.88E-03
11	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.75E-03
12	GO:0009986: cell surface	3.75E-03
13	GO:0005788: endoplasmic reticulum lumen	3.98E-03
14	GO:0030131: clathrin adaptor complex	4.35E-03
15	GO:0005779: integral component of peroxisomal membrane	4.98E-03
16	GO:0030665: clathrin-coated vesicle membrane	6.33E-03
17	GO:0005789: endoplasmic reticulum membrane	6.70E-03
18	GO:0016020: membrane	7.08E-03
19	GO:0046658: anchored component of plasma membrane	7.32E-03
20	GO:0048046: apoplast	1.38E-02
21	GO:0005905: clathrin-coated pit	1.47E-02
22	GO:0005618: cell wall	1.65E-02
23	GO:0005802: trans-Golgi network	2.21E-02
24	GO:0005737: cytoplasm	2.27E-02
25	GO:0031965: nuclear membrane	2.32E-02
26	GO:0019898: extrinsic component of membrane	2.32E-02
27	GO:0005768: endosome	2.67E-02
28	GO:0071944: cell periphery	2.67E-02
29	GO:0009705: plant-type vacuole membrane	2.67E-02
30	GO:0032580: Golgi cisterna membrane	2.79E-02
31	GO:0005773: vacuole	3.01E-02
32	GO:0005667: transcription factor complex	3.42E-02
33	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.52E-02