co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002376: immune system process	0.00E+00
2	GO:0018063: cytochrome c-heme linkage	0.00E+00
3	GO:0010055: atrichoblast differentiation	0.00E+00
4	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
5	GO:0010273: detoxification of copper ion	0.00E+00
6	GO:0097237: cellular response to toxic substance	0.00E+00
7	GO:0015690: aluminum cation transport	0.00E+00
8	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
9	GO:0010112: regulation of systemic acquired resistance	4.95E-08
10	GO:0009611: response to wounding	6.03E-08
11	GO:1903507: negative regulation of nucleic acid-templated transcription	1.19E-05
12	GO:0009753: response to jasmonic acid	1.29E-05
13	GO:0010311: lateral root formation	2.96E-05
14	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.28E-05
15	GO:0009643: photosynthetic acclimation	6.36E-05
16	GO:0050832: defense response to fungus	1.08E-04
17	GO:0034214: protein hexamerization	1.88E-04
18	GO:0090421: embryonic meristem initiation	1.88E-04
19	GO:0032107: regulation of response to nutrient levels	1.88E-04
20	GO:0015760: glucose-6-phosphate transport	1.88E-04
21	GO:0080173: male-female gamete recognition during double fertilization	1.88E-04
22	GO:0033306: phytol metabolic process	1.88E-04
23	GO:0009700: indole phytoalexin biosynthetic process	1.88E-04
24	GO:0006952: defense response	2.43E-04
25	GO:0080167: response to karrikin	2.60E-04
26	GO:0042742: defense response to bacterium	3.55E-04
27	GO:0006979: response to oxidative stress	3.62E-04
28	GO:0015712: hexose phosphate transport	4.24E-04
29	GO:0019725: cellular homeostasis	4.24E-04
30	GO:0071497: cellular response to freezing	4.24E-04
31	GO:0009838: abscission	4.24E-04
32	GO:0019521: D-gluconate metabolic process	4.24E-04
33	GO:0009407: toxin catabolic process	4.27E-04
34	GO:0008152: metabolic process	6.35E-04
35	GO:0000162: tryptophan biosynthetic process	6.80E-04
36	GO:0015714: phosphoenolpyruvate transport	6.92E-04
37	GO:0035436: triose phosphate transmembrane transport	6.92E-04
38	GO:0010186: positive regulation of cellular defense response	6.92E-04
39	GO:0010366: negative regulation of ethylene biosynthetic process	6.92E-04
40	GO:0009617: response to bacterium	6.94E-04
41	GO:0055114: oxidation-reduction process	7.94E-04
42	GO:0009636: response to toxic substance	8.13E-04
43	GO:0031347: regulation of defense response	8.92E-04
44	GO:0001676: long-chain fatty acid metabolic process	9.86E-04
45	GO:0010116: positive regulation of abscisic acid biosynthetic process	9.86E-04
46	GO:0070301: cellular response to hydrogen peroxide	9.86E-04
47	GO:0006012: galactose metabolic process	1.07E-03
48	GO:0009723: response to ethylene	1.27E-03
49	GO:1901002: positive regulation of response to salt stress	1.31E-03
50	GO:0015713: phosphoglycerate transport	1.31E-03
51	GO:1901141: regulation of lignin biosynthetic process	1.31E-03
52	GO:0010109: regulation of photosynthesis	1.31E-03
53	GO:0060548: negative regulation of cell death	1.31E-03
54	GO:0048638: regulation of developmental growth	1.31E-03
55	GO:0048830: adventitious root development	1.31E-03
56	GO:0006621: protein retention in ER lumen	1.31E-03
57	GO:0010600: regulation of auxin biosynthetic process	1.31E-03
58	GO:0042391: regulation of membrane potential	1.36E-03
59	GO:0000304: response to singlet oxygen	1.66E-03
60	GO:0009164: nucleoside catabolic process	1.66E-03
61	GO:0006623: protein targeting to vacuole	1.68E-03
62	GO:0009117: nucleotide metabolic process	2.05E-03
63	GO:0009759: indole glucosinolate biosynthetic process	2.05E-03
64	GO:0010256: endomembrane system organization	2.05E-03
65	GO:0009094: L-phenylalanine biosynthetic process	2.46E-03
66	GO:1900057: positive regulation of leaf senescence	2.90E-03
67	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.90E-03
68	GO:1902074: response to salt	2.90E-03
69	GO:1900056: negative regulation of leaf senescence	2.90E-03
70	GO:0080186: developmental vegetative growth	2.90E-03
71	GO:0040008: regulation of growth	2.98E-03
72	GO:0030091: protein repair	3.36E-03
73	GO:0043068: positive regulation of programmed cell death	3.36E-03
74	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.36E-03
75	GO:0009813: flavonoid biosynthetic process	3.53E-03
76	GO:0010120: camalexin biosynthetic process	3.84E-03
77	GO:0010204: defense response signaling pathway, resistance gene-independent	3.84E-03
78	GO:0030968: endoplasmic reticulum unfolded protein response	3.84E-03
79	GO:0017004: cytochrome complex assembly	3.84E-03
80	GO:0009699: phenylpropanoid biosynthetic process	3.84E-03
81	GO:0009880: embryonic pattern specification	3.84E-03
82	GO:0048527: lateral root development	3.88E-03
83	GO:0001708: cell fate specification	4.35E-03
84	GO:0006098: pentose-phosphate shunt	4.35E-03
85	GO:0019432: triglyceride biosynthetic process	4.35E-03
86	GO:0009638: phototropism	4.87E-03
87	GO:0090332: stomatal closure	4.87E-03
88	GO:0048268: clathrin coat assembly	4.87E-03
89	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.42E-03
90	GO:0006032: chitin catabolic process	5.42E-03
91	GO:0009641: shade avoidance	5.42E-03
92	GO:0019538: protein metabolic process	5.42E-03
93	GO:0051707: response to other organism	5.48E-03
94	GO:0072593: reactive oxygen species metabolic process	5.99E-03
95	GO:0048229: gametophyte development	5.99E-03
96	GO:0009684: indoleacetic acid biosynthetic process	5.99E-03
97	GO:0009682: induced systemic resistance	5.99E-03
98	GO:0052544: defense response by callose deposition in cell wall	5.99E-03
99	GO:0009737: response to abscisic acid	6.06E-03
100	GO:0002213: defense response to insect	6.58E-03
101	GO:0006812: cation transport	6.88E-03
102	GO:0009785: blue light signaling pathway	7.19E-03
103	GO:2000028: regulation of photoperiodism, flowering	7.19E-03
104	GO:0006813: potassium ion transport	7.38E-03
105	GO:0002237: response to molecule of bacterial origin	7.82E-03
106	GO:0046688: response to copper ion	8.47E-03
107	GO:0042343: indole glucosinolate metabolic process	8.47E-03
108	GO:0009626: plant-type hypersensitive response	9.31E-03
109	GO:0080147: root hair cell development	9.83E-03
110	GO:0009695: jasmonic acid biosynthetic process	1.05E-02
111	GO:0006825: copper ion transport	1.05E-02
112	GO:0051302: regulation of cell division	1.05E-02
113	GO:0043622: cortical microtubule organization	1.05E-02
114	GO:0016998: cell wall macromolecule catabolic process	1.13E-02
115	GO:0098542: defense response to other organism	1.13E-02
116	GO:0009751: response to salicylic acid	1.17E-02
117	GO:0071456: cellular response to hypoxia	1.20E-02
118	GO:0009625: response to insect	1.28E-02
119	GO:0070417: cellular response to cold	1.43E-02
120	GO:0008284: positive regulation of cell proliferation	1.43E-02
121	GO:0009651: response to salt stress	1.46E-02
122	GO:0000413: protein peptidyl-prolyl isomerization	1.51E-02
123	GO:0006885: regulation of pH	1.60E-02
124	GO:0006520: cellular amino acid metabolic process	1.60E-02
125	GO:0046323: glucose import	1.60E-02
126	GO:0006814: sodium ion transport	1.68E-02
127	GO:0009646: response to absence of light	1.68E-02
128	GO:0009749: response to glucose	1.77E-02
129	GO:0009851: auxin biosynthetic process	1.77E-02
130	GO:0007165: signal transduction	1.79E-02
131	GO:0000302: response to reactive oxygen species	1.85E-02
132	GO:0006635: fatty acid beta-oxidation	1.85E-02
133	GO:0009630: gravitropism	1.94E-02
134	GO:1901657: glycosyl compound metabolic process	2.03E-02
135	GO:0007166: cell surface receptor signaling pathway	2.09E-02
136	GO:0019760: glucosinolate metabolic process	2.13E-02
137	GO:0051607: defense response to virus	2.31E-02
138	GO:0009615: response to virus	2.41E-02
139	GO:0009555: pollen development	2.45E-02
140	GO:0010029: regulation of seed germination	2.51E-02
141	GO:0009627: systemic acquired resistance	2.61E-02
142	GO:0045893: positive regulation of transcription, DNA-templated	2.91E-02
143	GO:0006468: protein phosphorylation	2.95E-02
144	GO:0006970: response to osmotic stress	3.04E-02
145	GO:0009631: cold acclimation	3.23E-02
146	GO:0007568: aging	3.23E-02
147	GO:0046686: response to cadmium ion	3.41E-02
148	GO:0006508: proteolysis	3.43E-02
149	GO:0009867: jasmonic acid mediated signaling pathway	3.45E-02
150	GO:0010200: response to chitin	3.62E-02
151	GO:0006897: endocytosis	3.89E-02
152	GO:0010114: response to red light	4.13E-02
153	GO:0009744: response to sucrose	4.13E-02
154	GO:0009965: leaf morphogenesis	4.48E-02
155	GO:0007275: multicellular organism development	4.77E-02
156	GO:0042538: hyperosmotic salinity response	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
2	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
3	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
4	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
5	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
6	GO:0047681: aryl-alcohol dehydrogenase (NADP+) activity	0.00E+00
7	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
8	GO:0003714: transcription corepressor activity	3.99E-05
9	GO:0000386: second spliceosomal transesterification activity	1.88E-04
10	GO:0015168: glycerol transmembrane transporter activity	1.88E-04
11	GO:2001147: camalexin binding	1.88E-04
12	GO:0090353: polygalacturonase inhibitor activity	1.88E-04
13	GO:0010179: IAA-Ala conjugate hydrolase activity	1.88E-04
14	GO:2001227: quercitrin binding	1.88E-04
15	GO:0004385: guanylate kinase activity	4.24E-04
16	GO:0015152: glucose-6-phosphate transmembrane transporter activity	4.24E-04
17	GO:0030552: cAMP binding	6.12E-04
18	GO:0030553: cGMP binding	6.12E-04
19	GO:0004364: glutathione transferase activity	6.68E-04
20	GO:0071917: triose-phosphate transmembrane transporter activity	6.92E-04
21	GO:0004049: anthranilate synthase activity	6.92E-04
22	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	6.92E-04
23	GO:0005216: ion channel activity	8.29E-04
24	GO:0005432: calcium:sodium antiporter activity	9.86E-04
25	GO:0010178: IAA-amino acid conjugate hydrolase activity	9.86E-04
26	GO:0005354: galactose transmembrane transporter activity	9.86E-04
27	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.16E-03
28	GO:0003995: acyl-CoA dehydrogenase activity	1.31E-03
29	GO:0009916: alternative oxidase activity	1.31E-03
30	GO:0015120: phosphoglycerate transmembrane transporter activity	1.31E-03
31	GO:0047769: arogenate dehydratase activity	1.31E-03
32	GO:0004664: prephenate dehydratase activity	1.31E-03
33	GO:0046923: ER retention sequence binding	1.31E-03
34	GO:0005249: voltage-gated potassium channel activity	1.36E-03
35	GO:0030551: cyclic nucleotide binding	1.36E-03
36	GO:0004497: monooxygenase activity	1.41E-03
37	GO:0018685: alkane 1-monooxygenase activity	1.66E-03
38	GO:0003997: acyl-CoA oxidase activity	1.66E-03
39	GO:0005496: steroid binding	1.66E-03
40	GO:0015145: monosaccharide transmembrane transporter activity	1.66E-03
41	GO:0008200: ion channel inhibitor activity	2.05E-03
42	GO:0008237: metallopeptidase activity	2.30E-03
43	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.46E-03
44	GO:0003978: UDP-glucose 4-epimerase activity	2.46E-03
45	GO:0004144: diacylglycerol O-acyltransferase activity	2.46E-03
46	GO:0004656: procollagen-proline 4-dioxygenase activity	2.46E-03
47	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.46E-03
48	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.46E-03
49	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.46E-03
50	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.46E-03
51	GO:0051213: dioxygenase activity	2.58E-03
52	GO:0043295: glutathione binding	2.90E-03
53	GO:0005544: calcium-dependent phospholipid binding	3.36E-03
54	GO:0004033: aldo-keto reductase (NADP) activity	3.36E-03
55	GO:0052747: sinapyl alcohol dehydrogenase activity	3.36E-03
56	GO:0015491: cation:cation antiporter activity	3.36E-03
57	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.36E-03
58	GO:0004034: aldose 1-epimerase activity	3.36E-03
59	GO:0016207: 4-coumarate-CoA ligase activity	4.35E-03
60	GO:0071949: FAD binding	4.35E-03
61	GO:0050661: NADP binding	4.84E-03
62	GO:0004568: chitinase activity	5.42E-03
63	GO:0005545: 1-phosphatidylinositol binding	5.42E-03
64	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.58E-03
65	GO:0050660: flavin adenine dinucleotide binding	6.61E-03
66	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.19E-03
67	GO:0005315: inorganic phosphate transmembrane transporter activity	7.19E-03
68	GO:0005388: calcium-transporting ATPase activity	7.19E-03
69	GO:0004867: serine-type endopeptidase inhibitor activity	8.47E-03
70	GO:0004672: protein kinase activity	9.80E-03
71	GO:0001046: core promoter sequence-specific DNA binding	9.83E-03
72	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.00E-02
73	GO:0005507: copper ion binding	1.04E-02
74	GO:0019825: oxygen binding	1.04E-02
75	GO:0020037: heme binding	1.11E-02
76	GO:0004674: protein serine/threonine kinase activity	1.16E-02
77	GO:0043565: sequence-specific DNA binding	1.25E-02
78	GO:0003727: single-stranded RNA binding	1.35E-02
79	GO:0005451: monovalent cation:proton antiporter activity	1.51E-02
80	GO:0030276: clathrin binding	1.60E-02
81	GO:0005355: glucose transmembrane transporter activity	1.68E-02
82	GO:0016853: isomerase activity	1.68E-02
83	GO:0015299: solute:proton antiporter activity	1.68E-02
84	GO:0005506: iron ion binding	1.73E-02
85	GO:0015297: antiporter activity	1.74E-02
86	GO:0004872: receptor activity	1.77E-02
87	GO:0004197: cysteine-type endopeptidase activity	1.94E-02
88	GO:0015385: sodium:proton antiporter activity	2.03E-02
89	GO:0008194: UDP-glycosyltransferase activity	2.04E-02
90	GO:0016791: phosphatase activity	2.13E-02
91	GO:0008483: transaminase activity	2.22E-02
92	GO:0016597: amino acid binding	2.31E-02
93	GO:0030247: polysaccharide binding	2.71E-02
94	GO:0004721: phosphoprotein phosphatase activity	2.71E-02
95	GO:0102483: scopolin beta-glucosidase activity	2.71E-02
96	GO:0004806: triglyceride lipase activity	2.71E-02
97	GO:0046872: metal ion binding	2.81E-02
98	GO:0005096: GTPase activator activity	3.02E-02
99	GO:0004222: metalloendopeptidase activity	3.12E-02
100	GO:0016301: kinase activity	3.20E-02
101	GO:0050897: cobalt ion binding	3.23E-02
102	GO:0030145: manganese ion binding	3.23E-02
103	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.45E-02
104	GO:0030246: carbohydrate binding	3.54E-02
105	GO:0008422: beta-glucosidase activity	3.67E-02
106	GO:0042803: protein homodimerization activity	4.38E-02
107	GO:0005198: structural molecule activity	4.48E-02
108	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005950: anthranilate synthase complex	4.24E-04
3	GO:0005886: plasma membrane	5.32E-04
4	GO:0016021: integral component of membrane	9.36E-04
5	GO:0016363: nuclear matrix	2.46E-03
6	GO:0005788: endoplasmic reticulum lumen	2.73E-03
7	GO:0031225: anchored component of membrane	3.18E-03
8	GO:0005887: integral component of plasma membrane	4.07E-03
9	GO:0017119: Golgi transport complex	5.42E-03
10	GO:0031012: extracellular matrix	7.19E-03
11	GO:0070469: respiratory chain	1.05E-02
12	GO:0005905: clathrin-coated pit	1.13E-02
13	GO:0005802: trans-Golgi network	1.25E-02
14	GO:0043231: intracellular membrane-bounded organelle	1.34E-02
15	GO:0030136: clathrin-coated vesicle	1.43E-02
16	GO:0005768: endosome	1.51E-02
17	GO:0005770: late endosome	1.60E-02
18	GO:0005794: Golgi apparatus	1.75E-02
19	GO:0031965: nuclear membrane	1.77E-02
20	GO:0009505: plant-type cell wall	2.48E-02
21	GO:0005743: mitochondrial inner membrane	4.79E-02