co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
2	GO:0046865: terpenoid transport	0.00E+00
3	GO:0010324: membrane invagination	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:1902001: fatty acid transmembrane transport	0.00E+00
6	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
7	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
8	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
9	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
10	GO:0010273: detoxification of copper ion	0.00E+00
11	GO:0015690: aluminum cation transport	0.00E+00
12	GO:0002376: immune system process	0.00E+00
13	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
14	GO:0006952: defense response	4.91E-08
15	GO:0010112: regulation of systemic acquired resistance	5.91E-07
16	GO:0006979: response to oxidative stress	7.46E-07
17	GO:0009611: response to wounding	1.18E-06
18	GO:0009753: response to jasmonic acid	7.78E-06
19	GO:0010193: response to ozone	6.28E-05
20	GO:1903507: negative regulation of nucleic acid-templated transcription	6.83E-05
21	GO:0031347: regulation of defense response	8.10E-05
22	GO:0009225: nucleotide-sugar metabolic process	1.47E-04
23	GO:0009643: photosynthetic acclimation	2.12E-04
24	GO:0009759: indole glucosinolate biosynthetic process	2.12E-04
25	GO:0009751: response to salicylic acid	2.25E-04
26	GO:0071456: cellular response to hypoxia	2.98E-04
27	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.98E-04
28	GO:0009625: response to insect	3.35E-04
29	GO:0006012: galactose metabolic process	3.35E-04
30	GO:0009700: indole phytoalexin biosynthetic process	3.99E-04
31	GO:0050691: regulation of defense response to virus by host	3.99E-04
32	GO:0019305: dTDP-rhamnose biosynthetic process	3.99E-04
33	GO:0034214: protein hexamerization	3.99E-04
34	GO:1990542: mitochondrial transmembrane transport	3.99E-04
35	GO:0090421: embryonic meristem initiation	3.99E-04
36	GO:0032107: regulation of response to nutrient levels	3.99E-04
37	GO:0048508: embryonic meristem development	3.99E-04
38	GO:0015760: glucose-6-phosphate transport	3.99E-04
39	GO:0019567: arabinose biosynthetic process	3.99E-04
40	GO:0080173: male-female gamete recognition during double fertilization	3.99E-04
41	GO:0033306: phytol metabolic process	3.99E-04
42	GO:0050832: defense response to fungus	4.22E-04
43	GO:0042742: defense response to bacterium	4.32E-04
44	GO:0051707: response to other organism	4.48E-04
45	GO:0010120: camalexin biosynthetic process	5.64E-04
46	GO:0010150: leaf senescence	5.89E-04
47	GO:0006098: pentose-phosphate shunt	6.76E-04
48	GO:0006468: protein phosphorylation	7.44E-04
49	GO:0007166: cell surface receptor signaling pathway	7.48E-04
50	GO:0015908: fatty acid transport	8.66E-04
51	GO:0010271: regulation of chlorophyll catabolic process	8.66E-04
52	GO:0044419: interspecies interaction between organisms	8.66E-04
53	GO:0009945: radial axis specification	8.66E-04
54	GO:0019725: cellular homeostasis	8.66E-04
55	GO:0015712: hexose phosphate transport	8.66E-04
56	GO:0051258: protein polymerization	8.66E-04
57	GO:0071668: plant-type cell wall assembly	8.66E-04
58	GO:0009446: putrescine biosynthetic process	8.66E-04
59	GO:0015914: phospholipid transport	8.66E-04
60	GO:0009838: abscission	8.66E-04
61	GO:0006527: arginine catabolic process	8.66E-04
62	GO:0080181: lateral root branching	8.66E-04
63	GO:0055088: lipid homeostasis	8.66E-04
64	GO:0019521: D-gluconate metabolic process	8.66E-04
65	GO:0010115: regulation of abscisic acid biosynthetic process	8.66E-04
66	GO:0009684: indoleacetic acid biosynthetic process	1.07E-03
67	GO:0009682: induced systemic resistance	1.07E-03
68	GO:0009737: response to abscisic acid	1.15E-03
69	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.40E-03
70	GO:0035436: triose phosphate transmembrane transport	1.40E-03
71	GO:0010186: positive regulation of cellular defense response	1.40E-03
72	GO:0015692: lead ion transport	1.40E-03
73	GO:0015695: organic cation transport	1.40E-03
74	GO:0015714: phosphoenolpyruvate transport	1.40E-03
75	GO:0080168: abscisic acid transport	1.40E-03
76	GO:1900055: regulation of leaf senescence	1.40E-03
77	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.40E-03
78	GO:0006954: inflammatory response	1.40E-03
79	GO:0080167: response to karrikin	1.85E-03
80	GO:0000162: tryptophan biosynthetic process	1.95E-03
81	GO:0010200: response to chitin	1.97E-03
82	GO:0009867: jasmonic acid mediated signaling pathway	2.00E-03
83	GO:0015696: ammonium transport	2.03E-03
84	GO:0051289: protein homotetramerization	2.03E-03
85	GO:0001676: long-chain fatty acid metabolic process	2.03E-03
86	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.03E-03
87	GO:0048194: Golgi vesicle budding	2.03E-03
88	GO:2000377: regulation of reactive oxygen species metabolic process	2.16E-03
89	GO:0009695: jasmonic acid biosynthetic process	2.38E-03
90	GO:0015713: phosphoglycerate transport	2.73E-03
91	GO:0008295: spermidine biosynthetic process	2.73E-03
92	GO:0034440: lipid oxidation	2.73E-03
93	GO:0009694: jasmonic acid metabolic process	2.73E-03
94	GO:1901141: regulation of lignin biosynthetic process	2.73E-03
95	GO:0010109: regulation of photosynthesis	2.73E-03
96	GO:0060548: negative regulation of cell death	2.73E-03
97	GO:0045227: capsule polysaccharide biosynthetic process	2.73E-03
98	GO:0033320: UDP-D-xylose biosynthetic process	2.73E-03
99	GO:0048638: regulation of developmental growth	2.73E-03
100	GO:0048830: adventitious root development	2.73E-03
101	GO:0072488: ammonium transmembrane transport	2.73E-03
102	GO:0033358: UDP-L-arabinose biosynthetic process	2.73E-03
103	GO:0009636: response to toxic substance	3.21E-03
104	GO:0034052: positive regulation of plant-type hypersensitive response	3.49E-03
105	GO:0009164: nucleoside catabolic process	3.49E-03
106	GO:0009617: response to bacterium	3.65E-03
107	GO:0042391: regulation of membrane potential	3.99E-03
108	GO:0033365: protein localization to organelle	4.32E-03
109	GO:0006596: polyamine biosynthetic process	4.32E-03
110	GO:0009117: nucleotide metabolic process	4.32E-03
111	GO:0006574: valine catabolic process	4.32E-03
112	GO:0010256: endomembrane system organization	4.32E-03
113	GO:0042732: D-xylose metabolic process	4.32E-03
114	GO:0009646: response to absence of light	4.62E-03
115	GO:0009942: longitudinal axis specification	5.20E-03
116	GO:0009094: L-phenylalanine biosynthetic process	5.20E-03
117	GO:0080086: stamen filament development	5.20E-03
118	GO:0042372: phylloquinone biosynthetic process	5.20E-03
119	GO:1900057: positive regulation of leaf senescence	6.15E-03
120	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.15E-03
121	GO:0050829: defense response to Gram-negative bacterium	6.15E-03
122	GO:1902074: response to salt	6.15E-03
123	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.15E-03
124	GO:0043090: amino acid import	6.15E-03
125	GO:0071446: cellular response to salicylic acid stimulus	6.15E-03
126	GO:1900056: negative regulation of leaf senescence	6.15E-03
127	GO:0009723: response to ethylene	6.78E-03
128	GO:0043068: positive regulation of programmed cell death	7.15E-03
129	GO:0030091: protein repair	7.15E-03
130	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.15E-03
131	GO:0009819: drought recovery	7.15E-03
132	GO:0006997: nucleus organization	8.21E-03
133	GO:0010204: defense response signaling pathway, resistance gene-independent	8.21E-03
134	GO:0030968: endoplasmic reticulum unfolded protein response	8.21E-03
135	GO:2000031: regulation of salicylic acid mediated signaling pathway	8.21E-03
136	GO:0010208: pollen wall assembly	8.21E-03
137	GO:0009699: phenylpropanoid biosynthetic process	8.21E-03
138	GO:0009880: embryonic pattern specification	8.21E-03
139	GO:0006950: response to stress	9.07E-03
140	GO:0046916: cellular transition metal ion homeostasis	9.31E-03
141	GO:0019432: triglyceride biosynthetic process	9.31E-03
142	GO:0009056: catabolic process	9.31E-03
143	GO:0001708: cell fate specification	9.31E-03
144	GO:0009835: fruit ripening	9.31E-03
145	GO:0010380: regulation of chlorophyll biosynthetic process	1.05E-02
146	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.05E-02
147	GO:0008202: steroid metabolic process	1.05E-02
148	GO:0009638: phototropism	1.05E-02
149	GO:0090332: stomatal closure	1.05E-02
150	GO:0048268: clathrin coat assembly	1.05E-02
151	GO:0010311: lateral root formation	1.06E-02
152	GO:0009407: toxin catabolic process	1.11E-02
153	GO:0009414: response to water deprivation	1.14E-02
154	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.17E-02
155	GO:0019538: protein metabolic process	1.17E-02
156	GO:0006032: chitin catabolic process	1.17E-02
157	GO:0009641: shade avoidance	1.17E-02
158	GO:0048527: lateral root development	1.17E-02
159	GO:0040008: regulation of growth	1.20E-02
160	GO:0052544: defense response by callose deposition in cell wall	1.29E-02
161	GO:0048229: gametophyte development	1.29E-02
162	GO:0072593: reactive oxygen species metabolic process	1.29E-02
163	GO:0002213: defense response to insect	1.43E-02
164	GO:0000266: mitochondrial fission	1.43E-02
165	GO:0012501: programmed cell death	1.43E-02
166	GO:0006887: exocytosis	1.52E-02
167	GO:0006897: endocytosis	1.52E-02
168	GO:0006470: protein dephosphorylation	1.52E-02
169	GO:0009785: blue light signaling pathway	1.56E-02
170	GO:0002237: response to molecule of bacterial origin	1.70E-02
171	GO:0042343: indole glucosinolate metabolic process	1.84E-02
172	GO:0046688: response to copper ion	1.84E-02
173	GO:0080188: RNA-directed DNA methylation	1.84E-02
174	GO:0009901: anther dehiscence	1.84E-02
175	GO:0007165: signal transduction	1.96E-02
176	GO:0009409: response to cold	2.14E-02
177	GO:0006825: copper ion transport	2.30E-02
178	GO:0006874: cellular calcium ion homeostasis	2.30E-02
179	GO:0006970: response to osmotic stress	2.44E-02
180	GO:0016998: cell wall macromolecule catabolic process	2.46E-02
181	GO:0098542: defense response to other organism	2.46E-02
182	GO:0031408: oxylipin biosynthetic process	2.46E-02
183	GO:0040007: growth	2.79E-02
184	GO:0009693: ethylene biosynthetic process	2.79E-02
185	GO:0009626: plant-type hypersensitive response	2.81E-02
186	GO:0009620: response to fungus	2.90E-02
187	GO:0070417: cellular response to cold	3.14E-02
188	GO:0009624: response to nematode	3.18E-02
189	GO:0009555: pollen development	3.19E-02
190	GO:0000271: polysaccharide biosynthetic process	3.32E-02
191	GO:0000413: protein peptidyl-prolyl isomerization	3.32E-02
192	GO:0048653: anther development	3.32E-02
193	GO:0042631: cellular response to water deprivation	3.32E-02
194	GO:0006885: regulation of pH	3.50E-02
195	GO:0006520: cellular amino acid metabolic process	3.50E-02
196	GO:0045489: pectin biosynthetic process	3.50E-02
197	GO:0006623: protein targeting to vacuole	3.87E-02
198	GO:0009749: response to glucose	3.87E-02
199	GO:0000302: response to reactive oxygen species	4.07E-02
200	GO:0002229: defense response to oomycetes	4.07E-02
201	GO:0006635: fatty acid beta-oxidation	4.07E-02
202	GO:0071554: cell wall organization or biogenesis	4.07E-02
203	GO:0009630: gravitropism	4.26E-02
204	GO:0019761: glucosinolate biosynthetic process	4.26E-02
205	GO:0009845: seed germination	4.29E-02
206	GO:1901657: glycosyl compound metabolic process	4.46E-02
207	GO:0009790: embryo development	4.62E-02
208	GO:0009408: response to heat	4.70E-02
209	GO:0006904: vesicle docking involved in exocytosis	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0080131: hydroxyjasmonate sulfotransferase activity	0.00E+00
3	GO:0003714: transcription corepressor activity	2.01E-04
4	GO:0003978: UDP-glucose 4-epimerase activity	2.85E-04
5	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.85E-04
6	GO:0016301: kinase activity	3.15E-04
7	GO:0019707: protein-cysteine S-acyltransferase activity	3.99E-04
8	GO:2001147: camalexin binding	3.99E-04
9	GO:0008792: arginine decarboxylase activity	3.99E-04
10	GO:0015245: fatty acid transporter activity	3.99E-04
11	GO:0090353: polygalacturonase inhibitor activity	3.99E-04
12	GO:2001227: quercitrin binding	3.99E-04
13	GO:0019901: protein kinase binding	6.12E-04
14	GO:0004674: protein serine/threonine kinase activity	8.65E-04
15	GO:0050736: O-malonyltransferase activity	8.66E-04
16	GO:0004385: guanylate kinase activity	8.66E-04
17	GO:0048531: beta-1,3-galactosyltransferase activity	8.66E-04
18	GO:0008460: dTDP-glucose 4,6-dehydratase activity	8.66E-04
19	GO:0047364: desulfoglucosinolate sulfotransferase activity	8.66E-04
20	GO:0015152: glucose-6-phosphate transmembrane transporter activity	8.66E-04
21	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	8.66E-04
22	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	8.66E-04
23	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.38E-03
24	GO:0032403: protein complex binding	1.40E-03
25	GO:0016165: linoleate 13S-lipoxygenase activity	1.40E-03
26	GO:0071917: triose-phosphate transmembrane transporter activity	1.40E-03
27	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.40E-03
28	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.40E-03
29	GO:0008146: sulfotransferase activity	1.75E-03
30	GO:0030552: cAMP binding	1.75E-03
31	GO:0030553: cGMP binding	1.75E-03
32	GO:0017077: oxidative phosphorylation uncoupler activity	2.03E-03
33	GO:0001046: core promoter sequence-specific DNA binding	2.16E-03
34	GO:0005216: ion channel activity	2.38E-03
35	GO:0050378: UDP-glucuronate 4-epimerase activity	2.73E-03
36	GO:0009916: alternative oxidase activity	2.73E-03
37	GO:0015120: phosphoglycerate transmembrane transporter activity	2.73E-03
38	GO:0050373: UDP-arabinose 4-epimerase activity	2.73E-03
39	GO:0047769: arogenate dehydratase activity	2.73E-03
40	GO:0004834: tryptophan synthase activity	2.73E-03
41	GO:0004737: pyruvate decarboxylase activity	2.73E-03
42	GO:0004664: prephenate dehydratase activity	2.73E-03
43	GO:0003995: acyl-CoA dehydrogenase activity	2.73E-03
44	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.40E-03
45	GO:0003997: acyl-CoA oxidase activity	3.49E-03
46	GO:0005496: steroid binding	3.49E-03
47	GO:0047631: ADP-ribose diphosphatase activity	3.49E-03
48	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.49E-03
49	GO:0005249: voltage-gated potassium channel activity	3.99E-03
50	GO:0030551: cyclic nucleotide binding	3.99E-03
51	GO:0008519: ammonium transmembrane transporter activity	4.32E-03
52	GO:0030976: thiamine pyrophosphate binding	4.32E-03
53	GO:0048040: UDP-glucuronate decarboxylase activity	4.32E-03
54	GO:0000210: NAD+ diphosphatase activity	4.32E-03
55	GO:0003950: NAD+ ADP-ribosyltransferase activity	5.20E-03
56	GO:0004012: phospholipid-translocating ATPase activity	5.20E-03
57	GO:0004144: diacylglycerol O-acyltransferase activity	5.20E-03
58	GO:0005261: cation channel activity	5.20E-03
59	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	5.20E-03
60	GO:0070403: NAD+ binding	5.20E-03
61	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	5.20E-03
62	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	5.20E-03
63	GO:0043565: sequence-specific DNA binding	5.44E-03
64	GO:0043295: glutathione binding	6.15E-03
65	GO:0016831: carboxy-lyase activity	6.15E-03
66	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.84E-03
67	GO:0005544: calcium-dependent phospholipid binding	7.15E-03
68	GO:0004033: aldo-keto reductase (NADP) activity	7.15E-03
69	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.15E-03
70	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	7.15E-03
71	GO:0004034: aldose 1-epimerase activity	7.15E-03
72	GO:0005524: ATP binding	7.38E-03
73	GO:0004497: monooxygenase activity	7.54E-03
74	GO:0008142: oxysterol binding	8.21E-03
75	GO:0030247: polysaccharide binding	9.07E-03
76	GO:0004721: phosphoprotein phosphatase activity	9.07E-03
77	GO:0071949: FAD binding	9.31E-03
78	GO:0016207: 4-coumarate-CoA ligase activity	9.31E-03
79	GO:0016757: transferase activity, transferring glycosyl groups	1.01E-02
80	GO:0005509: calcium ion binding	1.03E-02
81	GO:0047617: acyl-CoA hydrolase activity	1.05E-02
82	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.11E-02
83	GO:0004722: protein serine/threonine phosphatase activity	1.14E-02
84	GO:0004568: chitinase activity	1.17E-02
85	GO:0008171: O-methyltransferase activity	1.17E-02
86	GO:0005545: 1-phosphatidylinositol binding	1.17E-02
87	GO:0015020: glucuronosyltransferase activity	1.17E-02
88	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.17E-02
89	GO:0050661: NADP binding	1.46E-02
90	GO:0005315: inorganic phosphate transmembrane transporter activity	1.56E-02
91	GO:0005388: calcium-transporting ATPase activity	1.56E-02
92	GO:0004364: glutathione transferase activity	1.59E-02
93	GO:0004970: ionotropic glutamate receptor activity	1.84E-02
94	GO:0005217: intracellular ligand-gated ion channel activity	1.84E-02
95	GO:0004190: aspartic-type endopeptidase activity	1.84E-02
96	GO:0005516: calmodulin binding	2.03E-02
97	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.46E-02
98	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.63E-02
99	GO:0050660: flavin adenine dinucleotide binding	2.67E-02
100	GO:0005451: monovalent cation:proton antiporter activity	3.32E-02
101	GO:0005199: structural constituent of cell wall	3.50E-02
102	GO:0030276: clathrin binding	3.50E-02
103	GO:0016853: isomerase activity	3.69E-02
104	GO:0015299: solute:proton antiporter activity	3.69E-02
105	GO:0050662: coenzyme binding	3.69E-02
106	GO:0042803: protein homodimerization activity	3.85E-02
107	GO:0016758: transferase activity, transferring hexosyl groups	3.87E-02
108	GO:0003824: catalytic activity	3.89E-02
109	GO:0004197: cysteine-type endopeptidase activity	4.26E-02
110	GO:0005515: protein binding	4.36E-02
111	GO:0030170: pyridoxal phosphate binding	4.40E-02
112	GO:0015385: sodium:proton antiporter activity	4.46E-02
113	GO:0016791: phosphatase activity	4.66E-02
114	GO:0008483: transaminase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0016021: integral component of membrane	1.60E-08
3	GO:0005886: plasma membrane	1.92E-07
4	GO:0005794: Golgi apparatus	1.89E-04
5	GO:0000138: Golgi trans cisterna	3.99E-04
6	GO:0005802: trans-Golgi network	7.73E-04
7	GO:0032580: Golgi cisterna membrane	8.51E-04
8	GO:0005901: caveola	8.66E-04
9	GO:0008287: protein serine/threonine phosphatase complex	1.40E-03
10	GO:0009530: primary cell wall	1.40E-03
11	GO:0070062: extracellular exosome	2.03E-03
12	GO:0000813: ESCRT I complex	3.49E-03
13	GO:0016363: nuclear matrix	5.20E-03
14	GO:0005768: endosome	9.77E-03
15	GO:0015030: Cajal body	1.05E-02
16	GO:0005777: peroxisome	1.28E-02
17	GO:0005578: proteinaceous extracellular matrix	1.56E-02
18	GO:0031012: extracellular matrix	1.56E-02
19	GO:0005769: early endosome	1.99E-02
20	GO:0005887: integral component of plasma membrane	2.15E-02
21	GO:0070469: respiratory chain	2.30E-02
22	GO:0005741: mitochondrial outer membrane	2.46E-02
23	GO:0005905: clathrin-coated pit	2.46E-02
24	GO:0005789: endoplasmic reticulum membrane	2.68E-02
25	GO:0030136: clathrin-coated vesicle	3.14E-02
26	GO:0005770: late endosome	3.50E-02
27	GO:0009504: cell plate	3.87E-02
28	GO:0031965: nuclear membrane	3.87E-02
29	GO:0000145: exocyst	4.26E-02