GO Enrichment Analysis of Co-expressed Genes with
AT1G01220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 3 | GO:0001778: plasma membrane repair | 0.00E+00 |
| 4 | GO:0046506: sulfolipid biosynthetic process | 1.75E-04 |
| 5 | GO:0010480: microsporocyte differentiation | 1.75E-04 |
| 6 | GO:0006426: glycyl-tRNA aminoacylation | 1.75E-04 |
| 7 | GO:0051641: cellular localization | 1.75E-04 |
| 8 | GO:0015904: tetracycline transport | 1.75E-04 |
| 9 | GO:0005980: glycogen catabolic process | 1.75E-04 |
| 10 | GO:0006438: valyl-tRNA aminoacylation | 1.75E-04 |
| 11 | GO:0046520: sphingoid biosynthetic process | 1.75E-04 |
| 12 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.96E-04 |
| 13 | GO:0018026: peptidyl-lysine monomethylation | 3.96E-04 |
| 14 | GO:0071497: cellular response to freezing | 3.96E-04 |
| 15 | GO:0046740: transport of virus in host, cell to cell | 3.96E-04 |
| 16 | GO:0009451: RNA modification | 4.69E-04 |
| 17 | GO:0009266: response to temperature stimulus | 4.96E-04 |
| 18 | GO:0010020: chloroplast fission | 4.96E-04 |
| 19 | GO:0009793: embryo development ending in seed dormancy | 5.48E-04 |
| 20 | GO:0033591: response to L-ascorbic acid | 6.47E-04 |
| 21 | GO:0006612: protein targeting to membrane | 9.23E-04 |
| 22 | GO:0046739: transport of virus in multicellular host | 9.23E-04 |
| 23 | GO:0032456: endocytic recycling | 9.23E-04 |
| 24 | GO:0043207: response to external biotic stimulus | 9.23E-04 |
| 25 | GO:0006508: proteolysis | 1.08E-03 |
| 26 | GO:0031122: cytoplasmic microtubule organization | 1.22E-03 |
| 27 | GO:0006808: regulation of nitrogen utilization | 1.22E-03 |
| 28 | GO:1901141: regulation of lignin biosynthetic process | 1.22E-03 |
| 29 | GO:0042274: ribosomal small subunit biogenesis | 1.22E-03 |
| 30 | GO:0000914: phragmoplast assembly | 1.22E-03 |
| 31 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.22E-03 |
| 32 | GO:0007020: microtubule nucleation | 1.22E-03 |
| 33 | GO:0046785: microtubule polymerization | 1.56E-03 |
| 34 | GO:0048497: maintenance of floral organ identity | 1.56E-03 |
| 35 | GO:0009247: glycolipid biosynthetic process | 1.56E-03 |
| 36 | GO:0042793: transcription from plastid promoter | 1.91E-03 |
| 37 | GO:0048831: regulation of shoot system development | 1.91E-03 |
| 38 | GO:0010405: arabinogalactan protein metabolic process | 1.91E-03 |
| 39 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.91E-03 |
| 40 | GO:0009612: response to mechanical stimulus | 2.30E-03 |
| 41 | GO:0030488: tRNA methylation | 2.30E-03 |
| 42 | GO:2000033: regulation of seed dormancy process | 2.30E-03 |
| 43 | GO:0010027: thylakoid membrane organization | 2.34E-03 |
| 44 | GO:0010098: suspensor development | 2.70E-03 |
| 45 | GO:0030307: positive regulation of cell growth | 2.70E-03 |
| 46 | GO:0010103: stomatal complex morphogenesis | 2.70E-03 |
| 47 | GO:0045995: regulation of embryonic development | 2.70E-03 |
| 48 | GO:0030497: fatty acid elongation | 2.70E-03 |
| 49 | GO:0048437: floral organ development | 2.70E-03 |
| 50 | GO:0000105: histidine biosynthetic process | 3.13E-03 |
| 51 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.58E-03 |
| 52 | GO:0009657: plastid organization | 3.58E-03 |
| 53 | GO:0006865: amino acid transport | 3.68E-03 |
| 54 | GO:0048507: meristem development | 4.05E-03 |
| 55 | GO:0005982: starch metabolic process | 4.54E-03 |
| 56 | GO:0009098: leucine biosynthetic process | 4.54E-03 |
| 57 | GO:1900865: chloroplast RNA modification | 4.54E-03 |
| 58 | GO:0031425: chloroplast RNA processing | 4.54E-03 |
| 59 | GO:0009640: photomorphogenesis | 4.95E-03 |
| 60 | GO:0048829: root cap development | 5.05E-03 |
| 61 | GO:0043085: positive regulation of catalytic activity | 5.58E-03 |
| 62 | GO:0000272: polysaccharide catabolic process | 5.58E-03 |
| 63 | GO:0048229: gametophyte development | 5.58E-03 |
| 64 | GO:0012501: programmed cell death | 6.13E-03 |
| 65 | GO:0006820: anion transport | 6.13E-03 |
| 66 | GO:0005983: starch catabolic process | 6.13E-03 |
| 67 | GO:0010075: regulation of meristem growth | 6.70E-03 |
| 68 | GO:0010588: cotyledon vascular tissue pattern formation | 6.70E-03 |
| 69 | GO:2000012: regulation of auxin polar transport | 6.70E-03 |
| 70 | GO:0007034: vacuolar transport | 7.28E-03 |
| 71 | GO:0009934: regulation of meristem structural organization | 7.28E-03 |
| 72 | GO:0048768: root hair cell tip growth | 7.28E-03 |
| 73 | GO:0090351: seedling development | 7.89E-03 |
| 74 | GO:0080188: RNA-directed DNA methylation | 7.89E-03 |
| 75 | GO:0000162: tryptophan biosynthetic process | 8.51E-03 |
| 76 | GO:0009624: response to nematode | 9.49E-03 |
| 77 | GO:0006418: tRNA aminoacylation for protein translation | 9.80E-03 |
| 78 | GO:0016042: lipid catabolic process | 1.00E-02 |
| 79 | GO:0003333: amino acid transmembrane transport | 1.05E-02 |
| 80 | GO:0010091: trichome branching | 1.26E-02 |
| 81 | GO:0009058: biosynthetic process | 1.26E-02 |
| 82 | GO:0009790: embryo development | 1.39E-02 |
| 83 | GO:0048653: anther development | 1.41E-02 |
| 84 | GO:0006662: glycerol ether metabolic process | 1.49E-02 |
| 85 | GO:0010305: leaf vascular tissue pattern formation | 1.49E-02 |
| 86 | GO:0048544: recognition of pollen | 1.56E-02 |
| 87 | GO:0016032: viral process | 1.81E-02 |
| 88 | GO:1901657: glycosyl compound metabolic process | 1.89E-02 |
| 89 | GO:0030163: protein catabolic process | 1.89E-02 |
| 90 | GO:0009416: response to light stimulus | 2.15E-02 |
| 91 | GO:0000910: cytokinesis | 2.15E-02 |
| 92 | GO:0009615: response to virus | 2.24E-02 |
| 93 | GO:0048573: photoperiodism, flowering | 2.52E-02 |
| 94 | GO:0009658: chloroplast organization | 2.55E-02 |
| 95 | GO:0000160: phosphorelay signal transduction system | 2.80E-02 |
| 96 | GO:0009910: negative regulation of flower development | 3.00E-02 |
| 97 | GO:0009631: cold acclimation | 3.00E-02 |
| 98 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.27E-02 |
| 99 | GO:0034599: cellular response to oxidative stress | 3.31E-02 |
| 100 | GO:0030001: metal ion transport | 3.52E-02 |
| 101 | GO:0006897: endocytosis | 3.62E-02 |
| 102 | GO:0006631: fatty acid metabolic process | 3.62E-02 |
| 103 | GO:0009736: cytokinin-activated signaling pathway | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046510: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity | 0.00E+00 |
| 2 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 3 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 4 | GO:0097100: supercoiled DNA binding | 0.00E+00 |
| 5 | GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity | 0.00E+00 |
| 6 | GO:0051752: phosphoglucan, water dikinase activity | 0.00E+00 |
| 7 | GO:0008237: metallopeptidase activity | 9.83E-06 |
| 8 | GO:0004176: ATP-dependent peptidase activity | 4.66E-05 |
| 9 | GO:0004645: phosphorylase activity | 1.75E-04 |
| 10 | GO:0004832: valine-tRNA ligase activity | 1.75E-04 |
| 11 | GO:0004820: glycine-tRNA ligase activity | 1.75E-04 |
| 12 | GO:0000170: sphingosine hydroxylase activity | 1.75E-04 |
| 13 | GO:0008184: glycogen phosphorylase activity | 1.75E-04 |
| 14 | GO:0019200: carbohydrate kinase activity | 3.96E-04 |
| 15 | GO:0003852: 2-isopropylmalate synthase activity | 3.96E-04 |
| 16 | GO:0042284: sphingolipid delta-4 desaturase activity | 3.96E-04 |
| 17 | GO:0008493: tetracycline transporter activity | 3.96E-04 |
| 18 | GO:0004826: phenylalanine-tRNA ligase activity | 3.96E-04 |
| 19 | GO:1901981: phosphatidylinositol phosphate binding | 3.96E-04 |
| 20 | GO:0003723: RNA binding | 5.16E-04 |
| 21 | GO:0004519: endonuclease activity | 5.17E-04 |
| 22 | GO:0016805: dipeptidase activity | 6.47E-04 |
| 23 | GO:0004180: carboxypeptidase activity | 6.47E-04 |
| 24 | GO:0017150: tRNA dihydrouridine synthase activity | 6.47E-04 |
| 25 | GO:0009041: uridylate kinase activity | 9.23E-04 |
| 26 | GO:0003727: single-stranded RNA binding | 1.06E-03 |
| 27 | GO:0016279: protein-lysine N-methyltransferase activity | 1.22E-03 |
| 28 | GO:2001070: starch binding | 1.91E-03 |
| 29 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.91E-03 |
| 30 | GO:0102229: amylopectin maltohydrolase activity | 1.91E-03 |
| 31 | GO:0016832: aldehyde-lyase activity | 2.30E-03 |
| 32 | GO:0016161: beta-amylase activity | 2.30E-03 |
| 33 | GO:0008173: RNA methyltransferase activity | 3.58E-03 |
| 34 | GO:0008289: lipid binding | 3.62E-03 |
| 35 | GO:0008047: enzyme activator activity | 5.05E-03 |
| 36 | GO:0043621: protein self-association | 5.35E-03 |
| 37 | GO:0005198: structural molecule activity | 5.56E-03 |
| 38 | GO:0000049: tRNA binding | 6.13E-03 |
| 39 | GO:0052689: carboxylic ester hydrolase activity | 7.20E-03 |
| 40 | GO:0015171: amino acid transmembrane transporter activity | 7.38E-03 |
| 41 | GO:0004190: aspartic-type endopeptidase activity | 7.89E-03 |
| 42 | GO:0005528: FK506 binding | 9.15E-03 |
| 43 | GO:0051087: chaperone binding | 9.80E-03 |
| 44 | GO:0004386: helicase activity | 1.04E-02 |
| 45 | GO:0033612: receptor serine/threonine kinase binding | 1.05E-02 |
| 46 | GO:0008408: 3'-5' exonuclease activity | 1.05E-02 |
| 47 | GO:0047134: protein-disulfide reductase activity | 1.33E-02 |
| 48 | GO:0004812: aminoacyl-tRNA ligase activity | 1.33E-02 |
| 49 | GO:0004527: exonuclease activity | 1.49E-02 |
| 50 | GO:0001085: RNA polymerase II transcription factor binding | 1.49E-02 |
| 51 | GO:0004791: thioredoxin-disulfide reductase activity | 1.56E-02 |
| 52 | GO:0003824: catalytic activity | 1.75E-02 |
| 53 | GO:0004518: nuclease activity | 1.81E-02 |
| 54 | GO:0016887: ATPase activity | 1.82E-02 |
| 55 | GO:0000156: phosphorelay response regulator activity | 1.89E-02 |
| 56 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.89E-02 |
| 57 | GO:0005524: ATP binding | 2.02E-02 |
| 58 | GO:0008168: methyltransferase activity | 2.46E-02 |
| 59 | GO:0102483: scopolin beta-glucosidase activity | 2.52E-02 |
| 60 | GO:0016788: hydrolase activity, acting on ester bonds | 2.60E-02 |
| 61 | GO:0004222: metalloendopeptidase activity | 2.90E-02 |
| 62 | GO:0050660: flavin adenine dinucleotide binding | 2.95E-02 |
| 63 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.00E-02 |
| 64 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.00E-02 |
| 65 | GO:0003697: single-stranded DNA binding | 3.20E-02 |
| 66 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.20E-02 |
| 67 | GO:0008422: beta-glucosidase activity | 3.41E-02 |
| 68 | GO:0042393: histone binding | 3.52E-02 |
| 69 | GO:0005525: GTP binding | 4.00E-02 |
| 70 | GO:0015293: symporter activity | 4.17E-02 |
| 71 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.28E-02 |
| 72 | GO:0003924: GTPase activity | 4.65E-02 |
| 73 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.74E-02 |
| 74 | GO:0016298: lipase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.74E-05 |
| 2 | GO:0009536: plastid | 9.97E-05 |
| 3 | GO:0032541: cortical endoplasmic reticulum | 1.75E-04 |
| 4 | GO:0031357: integral component of chloroplast inner membrane | 3.96E-04 |
| 5 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.96E-04 |
| 6 | GO:0019897: extrinsic component of plasma membrane | 6.47E-04 |
| 7 | GO:0009941: chloroplast envelope | 1.03E-03 |
| 8 | GO:0000930: gamma-tubulin complex | 1.22E-03 |
| 9 | GO:0009898: cytoplasmic side of plasma membrane | 1.22E-03 |
| 10 | GO:0005655: nucleolar ribonuclease P complex | 2.30E-03 |
| 11 | GO:0000815: ESCRT III complex | 2.30E-03 |
| 12 | GO:0009570: chloroplast stroma | 2.42E-03 |
| 13 | GO:0000418: DNA-directed RNA polymerase IV complex | 5.05E-03 |
| 14 | GO:0009508: plastid chromosome | 6.70E-03 |
| 15 | GO:0005938: cell cortex | 6.70E-03 |
| 16 | GO:0043231: intracellular membrane-bounded organelle | 1.18E-02 |
| 17 | GO:0009295: nucleoid | 2.06E-02 |
| 18 | GO:0005667: transcription factor complex | 2.42E-02 |
| 19 | GO:0009534: chloroplast thylakoid | 2.73E-02 |
| 20 | GO:0005874: microtubule | 3.06E-02 |
| 21 | GO:0009535: chloroplast thylakoid membrane | 4.95E-02 |