GO Enrichment Analysis of Co-expressed Genes with
AT5G66570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 2 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 3 | GO:0010207: photosystem II assembly | 3.34E-07 |
| 4 | GO:0015979: photosynthesis | 1.11E-06 |
| 5 | GO:0019684: photosynthesis, light reaction | 2.52E-05 |
| 6 | GO:0000476: maturation of 4.5S rRNA | 3.00E-05 |
| 7 | GO:0000967: rRNA 5'-end processing | 3.00E-05 |
| 8 | GO:0010480: microsporocyte differentiation | 3.00E-05 |
| 9 | GO:0010028: xanthophyll cycle | 3.00E-05 |
| 10 | GO:0034337: RNA folding | 3.00E-05 |
| 11 | GO:0019646: aerobic electron transport chain | 3.00E-05 |
| 12 | GO:0035304: regulation of protein dephosphorylation | 7.58E-05 |
| 13 | GO:0018026: peptidyl-lysine monomethylation | 7.58E-05 |
| 14 | GO:0016122: xanthophyll metabolic process | 7.58E-05 |
| 15 | GO:0034470: ncRNA processing | 7.58E-05 |
| 16 | GO:0045493: xylan catabolic process | 1.32E-04 |
| 17 | GO:0015994: chlorophyll metabolic process | 2.67E-04 |
| 18 | GO:0010411: xyloglucan metabolic process | 2.85E-04 |
| 19 | GO:0006656: phosphatidylcholine biosynthetic process | 3.42E-04 |
| 20 | GO:0042549: photosystem II stabilization | 4.20E-04 |
| 21 | GO:0042372: phylloquinone biosynthetic process | 5.02E-04 |
| 22 | GO:0009942: longitudinal axis specification | 5.02E-04 |
| 23 | GO:1901259: chloroplast rRNA processing | 5.02E-04 |
| 24 | GO:0048528: post-embryonic root development | 5.88E-04 |
| 25 | GO:0048437: floral organ development | 5.88E-04 |
| 26 | GO:0050829: defense response to Gram-negative bacterium | 5.88E-04 |
| 27 | GO:0005978: glycogen biosynthetic process | 6.76E-04 |
| 28 | GO:0032544: plastid translation | 7.68E-04 |
| 29 | GO:0007389: pattern specification process | 7.68E-04 |
| 30 | GO:0071482: cellular response to light stimulus | 7.68E-04 |
| 31 | GO:0010206: photosystem II repair | 8.63E-04 |
| 32 | GO:0010205: photoinhibition | 9.61E-04 |
| 33 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.16E-03 |
| 34 | GO:0048229: gametophyte development | 1.16E-03 |
| 35 | GO:0009773: photosynthetic electron transport in photosystem I | 1.16E-03 |
| 36 | GO:0010075: regulation of meristem growth | 1.38E-03 |
| 37 | GO:0009934: regulation of meristem structural organization | 1.50E-03 |
| 38 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.73E-03 |
| 39 | GO:0007017: microtubule-based process | 1.98E-03 |
| 40 | GO:0016998: cell wall macromolecule catabolic process | 2.11E-03 |
| 41 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.25E-03 |
| 42 | GO:0009826: unidimensional cell growth | 2.37E-03 |
| 43 | GO:0071369: cellular response to ethylene stimulus | 2.38E-03 |
| 44 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.38E-03 |
| 45 | GO:0048653: anther development | 2.80E-03 |
| 46 | GO:0019252: starch biosynthetic process | 3.24E-03 |
| 47 | GO:0010183: pollen tube guidance | 3.24E-03 |
| 48 | GO:0000302: response to reactive oxygen species | 3.40E-03 |
| 49 | GO:0010193: response to ozone | 3.40E-03 |
| 50 | GO:0010583: response to cyclopentenone | 3.55E-03 |
| 51 | GO:0009828: plant-type cell wall loosening | 3.87E-03 |
| 52 | GO:0010252: auxin homeostasis | 3.87E-03 |
| 53 | GO:0007568: aging | 5.78E-03 |
| 54 | GO:0009631: cold acclimation | 5.78E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 6.35E-03 |
| 56 | GO:0006631: fatty acid metabolic process | 6.94E-03 |
| 57 | GO:0009926: auxin polar transport | 7.34E-03 |
| 58 | GO:0042546: cell wall biogenesis | 7.54E-03 |
| 59 | GO:0009611: response to wounding | 8.09E-03 |
| 60 | GO:0031347: regulation of defense response | 8.38E-03 |
| 61 | GO:0009664: plant-type cell wall organization | 8.60E-03 |
| 62 | GO:0006364: rRNA processing | 9.03E-03 |
| 63 | GO:0010224: response to UV-B | 9.25E-03 |
| 64 | GO:0042545: cell wall modification | 1.13E-02 |
| 65 | GO:0042744: hydrogen peroxide catabolic process | 1.49E-02 |
| 66 | GO:0006633: fatty acid biosynthetic process | 1.59E-02 |
| 67 | GO:0071555: cell wall organization | 1.61E-02 |
| 68 | GO:0007623: circadian rhythm | 1.70E-02 |
| 69 | GO:0045490: pectin catabolic process | 1.70E-02 |
| 70 | GO:0007166: cell surface receptor signaling pathway | 1.87E-02 |
| 71 | GO:0009409: response to cold | 2.18E-02 |
| 72 | GO:0009860: pollen tube growth | 2.45E-02 |
| 73 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.78E-02 |
| 74 | GO:0032259: methylation | 3.47E-02 |
| 75 | GO:0006629: lipid metabolic process | 3.58E-02 |
| 76 | GO:0009408: response to heat | 3.58E-02 |
| 77 | GO:0048364: root development | 3.69E-02 |
| 78 | GO:0008152: metabolic process | 3.83E-02 |
| 79 | GO:0009734: auxin-activated signaling pathway | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.00E-05 |
| 6 | GO:0010242: oxygen evolving activity | 3.00E-05 |
| 7 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.00E-05 |
| 8 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 7.58E-05 |
| 9 | GO:0004312: fatty acid synthase activity | 7.58E-05 |
| 10 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.32E-04 |
| 11 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.32E-04 |
| 12 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.67E-04 |
| 13 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 2.67E-04 |
| 14 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.67E-04 |
| 15 | GO:0016279: protein-lysine N-methyltransferase activity | 2.67E-04 |
| 16 | GO:0004130: cytochrome-c peroxidase activity | 4.20E-04 |
| 17 | GO:0009672: auxin:proton symporter activity | 9.61E-04 |
| 18 | GO:0047372: acylglycerol lipase activity | 1.16E-03 |
| 19 | GO:0019843: rRNA binding | 1.18E-03 |
| 20 | GO:0031072: heat shock protein binding | 1.38E-03 |
| 21 | GO:0010329: auxin efflux transmembrane transporter activity | 1.38E-03 |
| 22 | GO:0008266: poly(U) RNA binding | 1.50E-03 |
| 23 | GO:0003954: NADH dehydrogenase activity | 1.86E-03 |
| 24 | GO:0003714: transcription corepressor activity | 1.86E-03 |
| 25 | GO:0033612: receptor serine/threonine kinase binding | 2.11E-03 |
| 26 | GO:0003756: protein disulfide isomerase activity | 2.52E-03 |
| 27 | GO:0019901: protein kinase binding | 3.24E-03 |
| 28 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.40E-03 |
| 29 | GO:0005200: structural constituent of cytoskeleton | 4.03E-03 |
| 30 | GO:0016168: chlorophyll binding | 4.53E-03 |
| 31 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.88E-03 |
| 32 | GO:0005515: protein binding | 6.36E-03 |
| 33 | GO:0043621: protein self-association | 7.75E-03 |
| 34 | GO:0003777: microtubule motor activity | 9.70E-03 |
| 35 | GO:0045330: aspartyl esterase activity | 9.70E-03 |
| 36 | GO:0030599: pectinesterase activity | 1.11E-02 |
| 37 | GO:0051082: unfolded protein binding | 1.16E-02 |
| 38 | GO:0008026: ATP-dependent helicase activity | 1.21E-02 |
| 39 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.62E-02 |
| 40 | GO:0046910: pectinesterase inhibitor activity | 1.62E-02 |
| 41 | GO:0008017: microtubule binding | 1.76E-02 |
| 42 | GO:0003743: translation initiation factor activity | 1.90E-02 |
| 43 | GO:0008168: methyltransferase activity | 2.26E-02 |
| 44 | GO:0004601: peroxidase activity | 2.32E-02 |
| 45 | GO:0003729: mRNA binding | 2.40E-02 |
| 46 | GO:0016787: hydrolase activity | 3.45E-02 |
| 47 | GO:0003924: GTPase activity | 3.58E-02 |
| 48 | GO:0008289: lipid binding | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 6.64E-26 |
| 4 | GO:0009507: chloroplast | 1.76E-16 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.85E-16 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.09E-11 |
| 7 | GO:0009579: thylakoid | 7.74E-10 |
| 8 | GO:0009538: photosystem I reaction center | 3.00E-08 |
| 9 | GO:0010287: plastoglobule | 4.86E-08 |
| 10 | GO:0030095: chloroplast photosystem II | 3.34E-07 |
| 11 | GO:0031977: thylakoid lumen | 3.35E-07 |
| 12 | GO:0009941: chloroplast envelope | 2.67E-05 |
| 13 | GO:0031304: intrinsic component of mitochondrial inner membrane | 7.58E-05 |
| 14 | GO:0030093: chloroplast photosystem I | 7.58E-05 |
| 15 | GO:0005618: cell wall | 1.30E-04 |
| 16 | GO:0009522: photosystem I | 1.41E-04 |
| 17 | GO:0042646: plastid nucleoid | 1.97E-04 |
| 18 | GO:0009570: chloroplast stroma | 3.93E-04 |
| 19 | GO:0016363: nuclear matrix | 5.02E-04 |
| 20 | GO:0042644: chloroplast nucleoid | 8.63E-04 |
| 21 | GO:0045298: tubulin complex | 8.63E-04 |
| 22 | GO:0016020: membrane | 9.55E-04 |
| 23 | GO:0055028: cortical microtubule | 1.06E-03 |
| 24 | GO:0032040: small-subunit processome | 1.27E-03 |
| 25 | GO:0009508: plastid chromosome | 1.38E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 1.98E-03 |
| 27 | GO:0005874: microtubule | 2.94E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 3.24E-03 |
| 29 | GO:0071944: cell periphery | 3.71E-03 |
| 30 | GO:0009295: nucleoid | 4.03E-03 |
| 31 | GO:0009536: plastid | 1.97E-02 |
| 32 | GO:0009505: plant-type cell wall | 2.02E-02 |
| 33 | GO:0031969: chloroplast membrane | 2.71E-02 |
| 34 | GO:0005743: mitochondrial inner membrane | 3.40E-02 |