GO Enrichment Analysis of Co-expressed Genes with
AT5G65700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0009249: protein lipoylation | 0.00E+00 |
| 3 | GO:0015822: ornithine transport | 0.00E+00 |
| 4 | GO:0035998: 7,8-dihydroneopterin 3'-triphosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 7 | GO:0006573: valine metabolic process | 0.00E+00 |
| 8 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 9 | GO:0042026: protein refolding | 2.27E-07 |
| 10 | GO:0019464: glycine decarboxylation via glycine cleavage system | 9.64E-06 |
| 11 | GO:0006546: glycine catabolic process | 9.64E-06 |
| 12 | GO:0007005: mitochondrion organization | 1.72E-05 |
| 13 | GO:0016117: carotenoid biosynthetic process | 2.63E-05 |
| 14 | GO:0006458: 'de novo' protein folding | 3.43E-05 |
| 15 | GO:0009735: response to cytokinin | 3.79E-05 |
| 16 | GO:0006438: valyl-tRNA aminoacylation | 1.04E-04 |
| 17 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.04E-04 |
| 18 | GO:0006551: leucine metabolic process | 1.04E-04 |
| 19 | GO:0000066: mitochondrial ornithine transport | 1.04E-04 |
| 20 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.61E-04 |
| 21 | GO:0019253: reductive pentose-phosphate cycle | 2.43E-04 |
| 22 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.44E-04 |
| 23 | GO:2000123: positive regulation of stomatal complex development | 2.44E-04 |
| 24 | GO:0043039: tRNA aminoacylation | 2.44E-04 |
| 25 | GO:0080183: response to photooxidative stress | 2.44E-04 |
| 26 | GO:0006418: tRNA aminoacylation for protein translation | 3.76E-04 |
| 27 | GO:0090506: axillary shoot meristem initiation | 4.05E-04 |
| 28 | GO:0006696: ergosterol biosynthetic process | 4.05E-04 |
| 29 | GO:2001295: malonyl-CoA biosynthetic process | 4.05E-04 |
| 30 | GO:0061077: chaperone-mediated protein folding | 4.13E-04 |
| 31 | GO:0080092: regulation of pollen tube growth | 4.52E-04 |
| 32 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.82E-04 |
| 33 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.82E-04 |
| 34 | GO:0046686: response to cadmium ion | 6.36E-04 |
| 35 | GO:0019676: ammonia assimilation cycle | 7.73E-04 |
| 36 | GO:0015976: carbon utilization | 7.73E-04 |
| 37 | GO:0009765: photosynthesis, light harvesting | 7.73E-04 |
| 38 | GO:2000122: negative regulation of stomatal complex development | 7.73E-04 |
| 39 | GO:2000038: regulation of stomatal complex development | 7.73E-04 |
| 40 | GO:0010037: response to carbon dioxide | 7.73E-04 |
| 41 | GO:0006542: glutamine biosynthetic process | 7.73E-04 |
| 42 | GO:0016123: xanthophyll biosynthetic process | 9.77E-04 |
| 43 | GO:0010375: stomatal complex patterning | 9.77E-04 |
| 44 | GO:0016120: carotene biosynthetic process | 9.77E-04 |
| 45 | GO:0010236: plastoquinone biosynthetic process | 9.77E-04 |
| 46 | GO:0009107: lipoate biosynthetic process | 9.77E-04 |
| 47 | GO:0006633: fatty acid biosynthetic process | 1.00E-03 |
| 48 | GO:0070814: hydrogen sulfide biosynthetic process | 1.19E-03 |
| 49 | GO:0016554: cytidine to uridine editing | 1.19E-03 |
| 50 | GO:0010190: cytochrome b6f complex assembly | 1.19E-03 |
| 51 | GO:0010067: procambium histogenesis | 1.43E-03 |
| 52 | GO:0009082: branched-chain amino acid biosynthetic process | 1.43E-03 |
| 53 | GO:0017148: negative regulation of translation | 1.43E-03 |
| 54 | GO:0046654: tetrahydrofolate biosynthetic process | 1.43E-03 |
| 55 | GO:0009099: valine biosynthetic process | 1.43E-03 |
| 56 | GO:0010555: response to mannitol | 1.43E-03 |
| 57 | GO:0006880: intracellular sequestering of iron ion | 1.67E-03 |
| 58 | GO:0006826: iron ion transport | 1.67E-03 |
| 59 | GO:0052543: callose deposition in cell wall | 1.93E-03 |
| 60 | GO:0048564: photosystem I assembly | 1.93E-03 |
| 61 | GO:0009642: response to light intensity | 1.93E-03 |
| 62 | GO:0009409: response to cold | 2.00E-03 |
| 63 | GO:0006839: mitochondrial transport | 2.16E-03 |
| 64 | GO:0022900: electron transport chain | 2.21E-03 |
| 65 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.21E-03 |
| 66 | GO:0048193: Golgi vesicle transport | 2.21E-03 |
| 67 | GO:0009097: isoleucine biosynthetic process | 2.21E-03 |
| 68 | GO:0006810: transport | 2.31E-03 |
| 69 | GO:0006754: ATP biosynthetic process | 2.49E-03 |
| 70 | GO:0048589: developmental growth | 2.49E-03 |
| 71 | GO:0000902: cell morphogenesis | 2.49E-03 |
| 72 | GO:1900865: chloroplast RNA modification | 2.79E-03 |
| 73 | GO:0015979: photosynthesis | 3.01E-03 |
| 74 | GO:0009970: cellular response to sulfate starvation | 3.10E-03 |
| 75 | GO:0000103: sulfate assimilation | 3.10E-03 |
| 76 | GO:0009773: photosynthetic electron transport in photosystem I | 3.42E-03 |
| 77 | GO:0019684: photosynthesis, light reaction | 3.42E-03 |
| 78 | GO:0006879: cellular iron ion homeostasis | 3.42E-03 |
| 79 | GO:0009767: photosynthetic electron transport chain | 4.09E-03 |
| 80 | GO:0048768: root hair cell tip growth | 4.44E-03 |
| 81 | GO:0010020: chloroplast fission | 4.44E-03 |
| 82 | GO:0010223: secondary shoot formation | 4.44E-03 |
| 83 | GO:0010039: response to iron ion | 4.80E-03 |
| 84 | GO:0042742: defense response to bacterium | 5.10E-03 |
| 85 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.18E-03 |
| 86 | GO:0019344: cysteine biosynthetic process | 5.56E-03 |
| 87 | GO:0007010: cytoskeleton organization | 5.56E-03 |
| 88 | GO:0007017: microtubule-based process | 5.95E-03 |
| 89 | GO:0009814: defense response, incompatible interaction | 6.76E-03 |
| 90 | GO:0009790: embryo development | 6.76E-03 |
| 91 | GO:0001944: vasculature development | 7.18E-03 |
| 92 | GO:0010089: xylem development | 7.61E-03 |
| 93 | GO:0006284: base-excision repair | 7.61E-03 |
| 94 | GO:0045490: pectin catabolic process | 8.00E-03 |
| 95 | GO:0000271: polysaccharide biosynthetic process | 8.49E-03 |
| 96 | GO:0000413: protein peptidyl-prolyl isomerization | 8.49E-03 |
| 97 | GO:0010087: phloem or xylem histogenesis | 8.49E-03 |
| 98 | GO:0045489: pectin biosynthetic process | 8.95E-03 |
| 99 | GO:0008360: regulation of cell shape | 8.95E-03 |
| 100 | GO:0055072: iron ion homeostasis | 9.90E-03 |
| 101 | GO:0000302: response to reactive oxygen species | 1.04E-02 |
| 102 | GO:0006457: protein folding | 1.20E-02 |
| 103 | GO:0010286: heat acclimation | 1.24E-02 |
| 104 | GO:0007267: cell-cell signaling | 1.24E-02 |
| 105 | GO:0009658: chloroplast organization | 1.24E-02 |
| 106 | GO:0009607: response to biotic stimulus | 1.40E-02 |
| 107 | GO:0009627: systemic acquired resistance | 1.45E-02 |
| 108 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.59E-02 |
| 109 | GO:0008219: cell death | 1.62E-02 |
| 110 | GO:0048767: root hair elongation | 1.68E-02 |
| 111 | GO:0009407: toxin catabolic process | 1.74E-02 |
| 112 | GO:0007568: aging | 1.80E-02 |
| 113 | GO:0010119: regulation of stomatal movement | 1.80E-02 |
| 114 | GO:0009853: photorespiration | 1.92E-02 |
| 115 | GO:0016051: carbohydrate biosynthetic process | 1.92E-02 |
| 116 | GO:0009744: response to sucrose | 2.30E-02 |
| 117 | GO:0009636: response to toxic substance | 2.50E-02 |
| 118 | GO:0008152: metabolic process | 2.51E-02 |
| 119 | GO:0042538: hyperosmotic salinity response | 2.70E-02 |
| 120 | GO:0009651: response to salt stress | 3.13E-02 |
| 121 | GO:0006096: glycolytic process | 3.20E-02 |
| 122 | GO:0042545: cell wall modification | 3.58E-02 |
| 123 | GO:0009908: flower development | 3.65E-02 |
| 124 | GO:0051301: cell division | 4.39E-02 |
| 125 | GO:0009058: biosynthetic process | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 6 | GO:0003934: GTP cyclohydrolase I activity | 0.00E+00 |
| 7 | GO:0044183: protein binding involved in protein folding | 2.94E-06 |
| 8 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 5.09E-06 |
| 9 | GO:0004831: tyrosine-tRNA ligase activity | 1.04E-04 |
| 10 | GO:0051996: squalene synthase activity | 1.04E-04 |
| 11 | GO:0010313: phytochrome binding | 1.04E-04 |
| 12 | GO:0003984: acetolactate synthase activity | 1.04E-04 |
| 13 | GO:0004832: valine-tRNA ligase activity | 1.04E-04 |
| 14 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.61E-04 |
| 15 | GO:0004618: phosphoglycerate kinase activity | 2.44E-04 |
| 16 | GO:0016415: octanoyltransferase activity | 2.44E-04 |
| 17 | GO:0004047: aminomethyltransferase activity | 2.44E-04 |
| 18 | GO:0004312: fatty acid synthase activity | 2.44E-04 |
| 19 | GO:0000064: L-ornithine transmembrane transporter activity | 2.44E-04 |
| 20 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.44E-04 |
| 21 | GO:0017118: lipoyltransferase activity | 2.44E-04 |
| 22 | GO:0042389: omega-3 fatty acid desaturase activity | 2.44E-04 |
| 23 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.05E-04 |
| 24 | GO:0004075: biotin carboxylase activity | 4.05E-04 |
| 25 | GO:0004751: ribose-5-phosphate isomerase activity | 4.05E-04 |
| 26 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 4.05E-04 |
| 27 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 4.05E-04 |
| 28 | GO:0051082: unfolded protein binding | 5.72E-04 |
| 29 | GO:0004812: aminoacyl-tRNA ligase activity | 5.78E-04 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 5.82E-04 |
| 31 | GO:0004322: ferroxidase activity | 5.82E-04 |
| 32 | GO:0048027: mRNA 5'-UTR binding | 5.82E-04 |
| 33 | GO:0008199: ferric iron binding | 5.82E-04 |
| 34 | GO:0008725: DNA-3-methyladenine glycosylase activity | 9.77E-04 |
| 35 | GO:0004356: glutamate-ammonia ligase activity | 9.77E-04 |
| 36 | GO:0003989: acetyl-CoA carboxylase activity | 9.77E-04 |
| 37 | GO:0005200: structural constituent of cytoskeleton | 1.04E-03 |
| 38 | GO:0016597: amino acid binding | 1.10E-03 |
| 39 | GO:0080030: methyl indole-3-acetate esterase activity | 1.19E-03 |
| 40 | GO:0008200: ion channel inhibitor activity | 1.19E-03 |
| 41 | GO:0051920: peroxiredoxin activity | 1.43E-03 |
| 42 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.43E-03 |
| 43 | GO:0043295: glutathione binding | 1.67E-03 |
| 44 | GO:0003746: translation elongation factor activity | 1.90E-03 |
| 45 | GO:0016209: antioxidant activity | 1.93E-03 |
| 46 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.21E-03 |
| 47 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.21E-03 |
| 48 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.49E-03 |
| 49 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.63E-03 |
| 50 | GO:0004565: beta-galactosidase activity | 4.09E-03 |
| 51 | GO:0004089: carbonate dehydratase activity | 4.09E-03 |
| 52 | GO:0016758: transferase activity, transferring hexosyl groups | 5.65E-03 |
| 53 | GO:0033612: receptor serine/threonine kinase binding | 6.35E-03 |
| 54 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.76E-03 |
| 55 | GO:0030570: pectate lyase activity | 7.18E-03 |
| 56 | GO:0005102: receptor binding | 8.05E-03 |
| 57 | GO:0019901: protein kinase binding | 9.90E-03 |
| 58 | GO:0004518: nuclease activity | 1.09E-02 |
| 59 | GO:0008483: transaminase activity | 1.24E-02 |
| 60 | GO:0030247: polysaccharide binding | 1.51E-02 |
| 61 | GO:0005525: GTP binding | 1.63E-02 |
| 62 | GO:0004364: glutathione transferase activity | 2.24E-02 |
| 63 | GO:0003924: GTPase activity | 2.28E-02 |
| 64 | GO:0009055: electron carrier activity | 2.44E-02 |
| 65 | GO:0005198: structural molecule activity | 2.50E-02 |
| 66 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.57E-02 |
| 67 | GO:0005524: ATP binding | 2.61E-02 |
| 68 | GO:0045330: aspartyl esterase activity | 3.06E-02 |
| 69 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.28E-02 |
| 70 | GO:0003729: mRNA binding | 3.47E-02 |
| 71 | GO:0030599: pectinesterase activity | 3.50E-02 |
| 72 | GO:0019843: rRNA binding | 4.29E-02 |
| 73 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.37E-02 |
| 74 | GO:0016829: lyase activity | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 2.28E-21 |
| 3 | GO:0009507: chloroplast | 9.08E-21 |
| 4 | GO:0009941: chloroplast envelope | 1.70E-15 |
| 5 | GO:0009579: thylakoid | 1.17E-10 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.04E-08 |
| 7 | GO:0048046: apoplast | 1.43E-07 |
| 8 | GO:0010319: stromule | 2.12E-06 |
| 9 | GO:0005960: glycine cleavage complex | 5.09E-06 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 1.26E-05 |
| 11 | GO:0022626: cytosolic ribosome | 4.26E-05 |
| 12 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.04E-04 |
| 13 | GO:0046658: anchored component of plasma membrane | 2.24E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 2.43E-04 |
| 15 | GO:0042170: plastid membrane | 2.44E-04 |
| 16 | GO:0031225: anchored component of membrane | 7.50E-04 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 7.57E-04 |
| 18 | GO:0019898: extrinsic component of membrane | 7.69E-04 |
| 19 | GO:0009505: plant-type cell wall | 1.74E-03 |
| 20 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.21E-03 |
| 21 | GO:0009539: photosystem II reaction center | 2.21E-03 |
| 22 | GO:0031977: thylakoid lumen | 2.25E-03 |
| 23 | GO:0045298: tubulin complex | 2.49E-03 |
| 24 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.49E-03 |
| 25 | GO:0016324: apical plasma membrane | 3.10E-03 |
| 26 | GO:0000311: plastid large ribosomal subunit | 3.75E-03 |
| 27 | GO:0005875: microtubule associated complex | 5.18E-03 |
| 28 | GO:0009534: chloroplast thylakoid | 1.10E-02 |
| 29 | GO:0009295: nucleoid | 1.24E-02 |
| 30 | GO:0031969: chloroplast membrane | 1.54E-02 |
| 31 | GO:0005739: mitochondrion | 1.59E-02 |
| 32 | GO:0015934: large ribosomal subunit | 1.80E-02 |
| 33 | GO:0005829: cytosol | 2.02E-02 |
| 34 | GO:0005743: mitochondrial inner membrane | 2.12E-02 |
| 35 | GO:0005856: cytoskeleton | 2.50E-02 |
| 36 | GO:0009536: plastid | 2.73E-02 |
| 37 | GO:0016020: membrane | 3.25E-02 |
| 38 | GO:0009706: chloroplast inner membrane | 3.66E-02 |
| 39 | GO:0005618: cell wall | 3.99E-02 |
| 40 | GO:0010287: plastoglobule | 4.13E-02 |