Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G64840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009661: chromoplast organization0.00E+00
2GO:0010243: response to organonitrogen compound0.00E+00
3GO:1902171: regulation of tocopherol cyclase activity0.00E+00
4GO:0046677: response to antibiotic0.00E+00
5GO:0050821: protein stabilization1.19E-06
6GO:0007623: circadian rhythm1.29E-05
7GO:0006741: NADP biosynthetic process2.38E-05
8GO:0043496: regulation of protein homodimerization activity2.38E-05
9GO:0050992: dimethylallyl diphosphate biosynthetic process2.38E-05
10GO:1904143: positive regulation of carotenoid biosynthetic process2.38E-05
11GO:0042754: negative regulation of circadian rhythm2.38E-05
12GO:0042548: regulation of photosynthesis, light reaction2.38E-05
13GO:0019674: NAD metabolic process4.33E-05
14GO:0019363: pyridine nucleotide biosynthetic process6.64E-05
15GO:0016120: carotene biosynthetic process1.21E-04
16GO:0009643: photosynthetic acclimation1.52E-04
17GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.52E-04
18GO:0009648: photoperiodism1.85E-04
19GO:0045893: positive regulation of transcription, DNA-templated1.87E-04
20GO:1900056: negative regulation of leaf senescence2.19E-04
21GO:0010100: negative regulation of photomorphogenesis2.91E-04
22GO:0071482: cellular response to light stimulus2.91E-04
23GO:0048574: long-day photoperiodism, flowering2.91E-04
24GO:0010380: regulation of chlorophyll biosynthetic process3.67E-04
25GO:0009641: shade avoidance4.07E-04
26GO:0010223: secondary shoot formation5.76E-04
27GO:0009266: response to temperature stimulus5.76E-04
28GO:0042753: positive regulation of circadian rhythm6.66E-04
29GO:0048511: rhythmic process8.05E-04
30GO:0010017: red or far-red light signaling pathway8.54E-04
31GO:0045892: negative regulation of transcription, DNA-templated8.63E-04
32GO:0000160: phosphorelay signal transduction system1.99E-03
33GO:0009910: negative regulation of flower development2.12E-03
34GO:0009631: cold acclimation2.12E-03
35GO:0006351: transcription, DNA-templated4.66E-03
36GO:0009409: response to cold4.84E-03
37GO:0009790: embryo development5.37E-03
38GO:0009739: response to gibberellin6.51E-03
39GO:0010468: regulation of gene expression6.81E-03
40GO:0009658: chloroplast organization8.16E-03
41GO:0009723: response to ethylene9.03E-03
42GO:0009651: response to salt stress1.20E-02
43GO:0009751: response to salicylic acid1.24E-02
44GO:0009753: response to jasmonic acid1.31E-02
45GO:0006468: protein phosphorylation2.78E-02
46GO:0009414: response to water deprivation3.05E-02
47GO:0006355: regulation of transcription, DNA-templated3.28E-02
48GO:0009733: response to auxin3.37E-02
49GO:0046686: response to cadmium ion4.26E-02
RankGO TermAdjusted P value
1GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity0.00E+00
2GO:0019904: protein domain specific binding3.80E-06
3GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity8.86E-06
4GO:0051538: 3 iron, 4 sulfur cluster binding1.21E-04
5GO:0003951: NAD+ kinase activity2.91E-04
6GO:0000989: transcription factor activity, transcription factor binding3.29E-04
7GO:0003954: NADH dehydrogenase activity7.11E-04
8GO:0004176: ATP-dependent peptidase activity8.05E-04
9GO:0000156: phosphorelay response regulator activity1.38E-03
10GO:0008237: metallopeptidase activity1.49E-03
11GO:0004222: metalloendopeptidase activity2.05E-03
12GO:0003700: transcription factor activity, sequence-specific DNA binding4.45E-03
13GO:0005515: protein binding4.47E-03
14GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.92E-03
15GO:0016829: lyase activity5.10E-03
16GO:0004672: protein kinase activity5.25E-03
17GO:0003677: DNA binding5.85E-03
18GO:0004497: monooxygenase activity9.48E-03
19GO:0016887: ATPase activity1.70E-02
20GO:0043565: sequence-specific DNA binding1.84E-02
21GO:0008270: zinc ion binding2.31E-02
22GO:0019825: oxygen binding2.41E-02
23GO:0005516: calmodulin binding2.51E-02
24GO:0005506: iron ion binding3.07E-02
25GO:0005524: ATP binding3.23E-02
26GO:0003824: catalytic activity3.31E-02
27GO:0020037: heme binding4.30E-02
RankGO TermAdjusted P value
1GO:0031304: intrinsic component of mitochondrial inner membrane2.38E-05
2GO:0042651: thylakoid membrane7.58E-04
3GO:0009507: chloroplast1.43E-03
4GO:0010287: plastoglobule4.65E-03
5GO:0009535: chloroplast thylakoid membrane8.00E-03
6GO:0031969: chloroplast membrane9.48E-03
7GO:0009941: chloroplast envelope1.69E-02
8GO:0005777: peroxisome2.07E-02
9GO:0009570: chloroplast stroma2.36E-02
10GO:0009536: plastid3.59E-02
11GO:0005730: nucleolus4.51E-02
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Gene type



Gene DE type