GO Enrichment Analysis of Co-expressed Genes with
AT5G63030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0016139: glycoside catabolic process | 0.00E+00 |
| 3 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 4 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 5 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 6 | GO:0046685: response to arsenic-containing substance | 7.67E-07 |
| 7 | GO:0046686: response to cadmium ion | 8.51E-06 |
| 8 | GO:0006098: pentose-phosphate shunt | 7.10E-05 |
| 9 | GO:0080173: male-female gamete recognition during double fertilization | 8.61E-05 |
| 10 | GO:0009962: regulation of flavonoid biosynthetic process | 8.61E-05 |
| 11 | GO:0055114: oxidation-reduction process | 1.88E-04 |
| 12 | GO:0031648: protein destabilization | 2.04E-04 |
| 13 | GO:0071395: cellular response to jasmonic acid stimulus | 2.04E-04 |
| 14 | GO:0019521: D-gluconate metabolic process | 2.04E-04 |
| 15 | GO:0019752: carboxylic acid metabolic process | 2.04E-04 |
| 16 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 2.04E-04 |
| 17 | GO:0008333: endosome to lysosome transport | 3.42E-04 |
| 18 | GO:0010359: regulation of anion channel activity | 3.42E-04 |
| 19 | GO:0010288: response to lead ion | 3.42E-04 |
| 20 | GO:0001676: long-chain fatty acid metabolic process | 4.92E-04 |
| 21 | GO:0009165: nucleotide biosynthetic process | 6.55E-04 |
| 22 | GO:0030163: protein catabolic process | 7.28E-04 |
| 23 | GO:0006564: L-serine biosynthetic process | 8.29E-04 |
| 24 | GO:0010405: arabinogalactan protein metabolic process | 1.01E-03 |
| 25 | GO:0043248: proteasome assembly | 1.01E-03 |
| 26 | GO:0070814: hydrogen sulfide biosynthetic process | 1.01E-03 |
| 27 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.01E-03 |
| 28 | GO:1902456: regulation of stomatal opening | 1.01E-03 |
| 29 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.20E-03 |
| 30 | GO:0050790: regulation of catalytic activity | 1.41E-03 |
| 31 | GO:0071446: cellular response to salicylic acid stimulus | 1.41E-03 |
| 32 | GO:1900056: negative regulation of leaf senescence | 1.41E-03 |
| 33 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.63E-03 |
| 34 | GO:0006605: protein targeting | 1.63E-03 |
| 35 | GO:0050821: protein stabilization | 1.63E-03 |
| 36 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.10E-03 |
| 37 | GO:0009821: alkaloid biosynthetic process | 2.10E-03 |
| 38 | GO:0045454: cell redox homeostasis | 2.31E-03 |
| 39 | GO:0030042: actin filament depolymerization | 2.35E-03 |
| 40 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 2.35E-03 |
| 41 | GO:0006486: protein glycosylation | 2.54E-03 |
| 42 | GO:0000103: sulfate assimilation | 2.61E-03 |
| 43 | GO:0072593: reactive oxygen species metabolic process | 2.87E-03 |
| 44 | GO:0015706: nitrate transport | 3.15E-03 |
| 45 | GO:0006094: gluconeogenesis | 3.43E-03 |
| 46 | GO:0006006: glucose metabolic process | 3.43E-03 |
| 47 | GO:0007034: vacuolar transport | 3.73E-03 |
| 48 | GO:0010167: response to nitrate | 4.03E-03 |
| 49 | GO:0046688: response to copper ion | 4.03E-03 |
| 50 | GO:0009116: nucleoside metabolic process | 4.65E-03 |
| 51 | GO:0000027: ribosomal large subunit assembly | 4.65E-03 |
| 52 | GO:0006825: copper ion transport | 4.98E-03 |
| 53 | GO:0031348: negative regulation of defense response | 5.66E-03 |
| 54 | GO:0006012: galactose metabolic process | 6.01E-03 |
| 55 | GO:0019722: calcium-mediated signaling | 6.36E-03 |
| 56 | GO:0010091: trichome branching | 6.36E-03 |
| 57 | GO:0009611: response to wounding | 6.39E-03 |
| 58 | GO:0042147: retrograde transport, endosome to Golgi | 6.73E-03 |
| 59 | GO:0010501: RNA secondary structure unwinding | 7.10E-03 |
| 60 | GO:0009617: response to bacterium | 7.37E-03 |
| 61 | GO:0006520: cellular amino acid metabolic process | 7.48E-03 |
| 62 | GO:0006623: protein targeting to vacuole | 8.26E-03 |
| 63 | GO:0010193: response to ozone | 8.66E-03 |
| 64 | GO:0007264: small GTPase mediated signal transduction | 9.07E-03 |
| 65 | GO:0001666: response to hypoxia | 1.12E-02 |
| 66 | GO:0009615: response to virus | 1.12E-02 |
| 67 | GO:0042128: nitrate assimilation | 1.21E-02 |
| 68 | GO:0009407: toxin catabolic process | 1.45E-02 |
| 69 | GO:0010043: response to zinc ion | 1.50E-02 |
| 70 | GO:0010119: regulation of stomatal movement | 1.50E-02 |
| 71 | GO:0042742: defense response to bacterium | 1.52E-02 |
| 72 | GO:0006979: response to oxidative stress | 1.54E-02 |
| 73 | GO:0006629: lipid metabolic process | 1.76E-02 |
| 74 | GO:0006631: fatty acid metabolic process | 1.81E-02 |
| 75 | GO:0009644: response to high light intensity | 2.02E-02 |
| 76 | GO:0000154: rRNA modification | 2.08E-02 |
| 77 | GO:0009651: response to salt stress | 2.13E-02 |
| 78 | GO:0009846: pollen germination | 2.25E-02 |
| 79 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.43E-02 |
| 80 | GO:0006096: glycolytic process | 2.67E-02 |
| 81 | GO:0009620: response to fungus | 2.85E-02 |
| 82 | GO:0009553: embryo sac development | 2.98E-02 |
| 83 | GO:0018105: peptidyl-serine phosphorylation | 3.11E-02 |
| 84 | GO:0009058: biosynthetic process | 3.71E-02 |
| 85 | GO:0042744: hydrogen peroxide catabolic process | 3.92E-02 |
| 86 | GO:0009737: response to abscisic acid | 3.92E-02 |
| 87 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.23E-02 |
| 88 | GO:0010150: leaf senescence | 4.49E-02 |
| 89 | GO:0016310: phosphorylation | 4.66E-02 |
| 90 | GO:0006470: protein dephosphorylation | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 2 | GO:0016787: hydrolase activity | 1.56E-04 |
| 3 | GO:0032791: lead ion binding | 2.04E-04 |
| 4 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.04E-04 |
| 5 | GO:0046593: mandelonitrile lyase activity | 2.04E-04 |
| 6 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.04E-04 |
| 7 | GO:0052692: raffinose alpha-galactosidase activity | 3.42E-04 |
| 8 | GO:0005093: Rab GDP-dissociation inhibitor activity | 3.42E-04 |
| 9 | GO:0008430: selenium binding | 3.42E-04 |
| 10 | GO:0016531: copper chaperone activity | 3.42E-04 |
| 11 | GO:0004557: alpha-galactosidase activity | 3.42E-04 |
| 12 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 3.42E-04 |
| 13 | GO:0031176: endo-1,4-beta-xylanase activity | 4.92E-04 |
| 14 | GO:0004749: ribose phosphate diphosphokinase activity | 4.92E-04 |
| 15 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 6.55E-04 |
| 16 | GO:0000062: fatty-acyl-CoA binding | 6.55E-04 |
| 17 | GO:0004301: epoxide hydrolase activity | 6.55E-04 |
| 18 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.01E-03 |
| 19 | GO:0004332: fructose-bisphosphate aldolase activity | 1.01E-03 |
| 20 | GO:0031593: polyubiquitin binding | 1.01E-03 |
| 21 | GO:0047714: galactolipase activity | 1.01E-03 |
| 22 | GO:0051920: peroxiredoxin activity | 1.20E-03 |
| 23 | GO:0102391: decanoate--CoA ligase activity | 1.20E-03 |
| 24 | GO:0003978: UDP-glucose 4-epimerase activity | 1.20E-03 |
| 25 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.20E-03 |
| 26 | GO:0004602: glutathione peroxidase activity | 1.20E-03 |
| 27 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.20E-03 |
| 28 | GO:0005515: protein binding | 1.36E-03 |
| 29 | GO:0016831: carboxy-lyase activity | 1.41E-03 |
| 30 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.41E-03 |
| 31 | GO:0030515: snoRNA binding | 1.41E-03 |
| 32 | GO:0043295: glutathione binding | 1.41E-03 |
| 33 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.41E-03 |
| 34 | GO:0016209: antioxidant activity | 1.63E-03 |
| 35 | GO:0008135: translation factor activity, RNA binding | 1.86E-03 |
| 36 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 1.86E-03 |
| 37 | GO:0005198: structural molecule activity | 2.12E-03 |
| 38 | GO:0016844: strictosidine synthase activity | 2.35E-03 |
| 39 | GO:0015112: nitrate transmembrane transporter activity | 2.35E-03 |
| 40 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.87E-03 |
| 41 | GO:0008378: galactosyltransferase activity | 3.15E-03 |
| 42 | GO:0031418: L-ascorbic acid binding | 4.65E-03 |
| 43 | GO:0004298: threonine-type endopeptidase activity | 5.32E-03 |
| 44 | GO:0004197: cysteine-type endopeptidase activity | 9.07E-03 |
| 45 | GO:0004601: peroxidase activity | 9.57E-03 |
| 46 | GO:0008237: metallopeptidase activity | 1.03E-02 |
| 47 | GO:0016597: amino acid binding | 1.08E-02 |
| 48 | GO:0008233: peptidase activity | 1.17E-02 |
| 49 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.21E-02 |
| 50 | GO:0004683: calmodulin-dependent protein kinase activity | 1.26E-02 |
| 51 | GO:0004806: triglyceride lipase activity | 1.26E-02 |
| 52 | GO:0004004: ATP-dependent RNA helicase activity | 1.26E-02 |
| 53 | GO:0005509: calcium ion binding | 1.38E-02 |
| 54 | GO:0005096: GTPase activator activity | 1.40E-02 |
| 55 | GO:0004722: protein serine/threonine phosphatase activity | 1.56E-02 |
| 56 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.60E-02 |
| 57 | GO:0003746: translation elongation factor activity | 1.60E-02 |
| 58 | GO:0003697: single-stranded DNA binding | 1.60E-02 |
| 59 | GO:0050661: NADP binding | 1.76E-02 |
| 60 | GO:0004364: glutathione transferase activity | 1.86E-02 |
| 61 | GO:0009055: electron carrier activity | 1.89E-02 |
| 62 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.02E-02 |
| 63 | GO:0016491: oxidoreductase activity | 2.16E-02 |
| 64 | GO:0051287: NAD binding | 2.19E-02 |
| 65 | GO:0016298: lipase activity | 2.43E-02 |
| 66 | GO:0008234: cysteine-type peptidase activity | 2.55E-02 |
| 67 | GO:0016887: ATPase activity | 2.73E-02 |
| 68 | GO:0003779: actin binding | 2.98E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 3.11E-02 |
| 70 | GO:0000166: nucleotide binding | 3.12E-02 |
| 71 | GO:0008026: ATP-dependent helicase activity | 3.17E-02 |
| 72 | GO:0004386: helicase activity | 3.24E-02 |
| 73 | GO:0016758: transferase activity, transferring hexosyl groups | 3.50E-02 |
| 74 | GO:0030170: pyridoxal phosphate binding | 3.85E-02 |
| 75 | GO:0005507: copper ion binding | 4.43E-02 |
| 76 | GO:0005516: calmodulin binding | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 3 | GO:0005829: cytosol | 3.28E-07 |
| 4 | GO:0005794: Golgi apparatus | 2.87E-04 |
| 5 | GO:0048046: apoplast | 5.50E-04 |
| 6 | GO:0005771: multivesicular body | 1.01E-03 |
| 7 | GO:0030904: retromer complex | 1.01E-03 |
| 8 | GO:0031428: box C/D snoRNP complex | 1.01E-03 |
| 9 | GO:0016272: prefoldin complex | 1.20E-03 |
| 10 | GO:0005789: endoplasmic reticulum membrane | 1.56E-03 |
| 11 | GO:0009514: glyoxysome | 1.86E-03 |
| 12 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.86E-03 |
| 13 | GO:0005783: endoplasmic reticulum | 2.29E-03 |
| 14 | GO:0000502: proteasome complex | 2.54E-03 |
| 15 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.87E-03 |
| 16 | GO:0032040: small-subunit processome | 3.15E-03 |
| 17 | GO:0005764: lysosome | 3.73E-03 |
| 18 | GO:0005750: mitochondrial respiratory chain complex III | 3.73E-03 |
| 19 | GO:0043234: protein complex | 4.34E-03 |
| 20 | GO:0005623: cell | 4.61E-03 |
| 21 | GO:0005758: mitochondrial intermembrane space | 4.65E-03 |
| 22 | GO:0005839: proteasome core complex | 5.32E-03 |
| 23 | GO:0015629: actin cytoskeleton | 6.01E-03 |
| 24 | GO:0005778: peroxisomal membrane | 1.03E-02 |
| 25 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.05E-02 |
| 26 | GO:0005886: plasma membrane | 1.06E-02 |
| 27 | GO:0009507: chloroplast | 1.21E-02 |
| 28 | GO:0005622: intracellular | 1.29E-02 |
| 29 | GO:0005773: vacuole | 1.37E-02 |
| 30 | GO:0005819: spindle | 1.70E-02 |
| 31 | GO:0031902: late endosome membrane | 1.81E-02 |
| 32 | GO:0009570: chloroplast stroma | 1.97E-02 |
| 33 | GO:0009506: plasmodesma | 2.46E-02 |
| 34 | GO:0005635: nuclear envelope | 2.49E-02 |
| 35 | GO:0005618: cell wall | 2.73E-02 |
| 36 | GO:0005737: cytoplasm | 2.75E-02 |
| 37 | GO:0005730: nucleolus | 2.95E-02 |
| 38 | GO:0010287: plastoglobule | 3.44E-02 |
| 39 | GO:0005777: peroxisome | 3.58E-02 |
| 40 | GO:0009524: phragmoplast | 3.71E-02 |
| 41 | GO:0005615: extracellular space | 4.86E-02 |