Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G62920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:1900000: regulation of anthocyanin catabolic process0.00E+00
3GO:0015979: photosynthesis1.77E-08
4GO:0015995: chlorophyll biosynthetic process6.10E-06
5GO:0010480: microsporocyte differentiation2.64E-05
6GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process2.64E-05
7GO:0000476: maturation of 4.5S rRNA2.64E-05
8GO:0000967: rRNA 5'-end processing2.64E-05
9GO:0015790: UDP-xylose transport6.72E-05
10GO:0006521: regulation of cellular amino acid metabolic process6.72E-05
11GO:0034470: ncRNA processing6.72E-05
12GO:0009735: response to cytokinin8.44E-05
13GO:0042631: cellular response to water deprivation1.00E-04
14GO:0045493: xylan catabolic process1.18E-04
15GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement1.18E-04
16GO:0009647: skotomorphogenesis1.76E-04
17GO:0010306: rhamnogalacturonan II biosynthetic process1.76E-04
18GO:0009765: photosynthesis, light harvesting2.39E-04
19GO:0030007: cellular potassium ion homeostasis2.39E-04
20GO:0009913: epidermal cell differentiation3.78E-04
21GO:0009645: response to low light intensity stimulus5.30E-04
22GO:0048437: floral organ development5.30E-04
23GO:0009769: photosynthesis, light harvesting in photosystem II5.30E-04
24GO:0009690: cytokinin metabolic process6.10E-04
25GO:0019827: stem cell population maintenance6.10E-04
26GO:0034765: regulation of ion transmembrane transport7.80E-04
27GO:0006783: heme biosynthetic process7.80E-04
28GO:0009245: lipid A biosynthetic process7.80E-04
29GO:0006782: protoporphyrinogen IX biosynthetic process9.59E-04
30GO:0048229: gametophyte development1.05E-03
31GO:0019684: photosynthesis, light reaction1.05E-03
32GO:0010075: regulation of meristem growth1.25E-03
33GO:0009934: regulation of meristem structural organization1.35E-03
34GO:0010030: positive regulation of seed germination1.45E-03
35GO:0009768: photosynthesis, light harvesting in photosystem I1.78E-03
36GO:0007017: microtubule-based process1.78E-03
37GO:0051260: protein homooligomerization1.90E-03
38GO:0009269: response to desiccation1.90E-03
39GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.14E-03
40GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.39E-03
41GO:0048653: anther development2.52E-03
42GO:0042335: cuticle development2.52E-03
43GO:0048868: pollen tube development2.65E-03
44GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.69E-03
45GO:0048825: cotyledon development2.91E-03
46GO:0000302: response to reactive oxygen species3.05E-03
47GO:0010193: response to ozone3.05E-03
48GO:0009828: plant-type cell wall loosening3.47E-03
49GO:0071805: potassium ion transmembrane transport3.62E-03
50GO:0010029: regulation of seed germination4.06E-03
51GO:0009627: systemic acquired resistance4.22E-03
52GO:0010411: xyloglucan metabolic process4.37E-03
53GO:0018298: protein-chromophore linkage4.69E-03
54GO:0000160: phosphorelay signal transduction system4.85E-03
55GO:0010218: response to far red light5.02E-03
56GO:0010119: regulation of stomatal movement5.18E-03
57GO:0009637: response to blue light5.52E-03
58GO:0034599: cellular response to oxidative stress5.69E-03
59GO:0010114: response to red light6.57E-03
60GO:0009640: photomorphogenesis6.57E-03
61GO:0009416: response to light stimulus6.74E-03
62GO:0009644: response to high light intensity6.94E-03
63GO:0008643: carbohydrate transport6.94E-03
64GO:0009664: plant-type cell wall organization7.69E-03
65GO:0009736: cytokinin-activated signaling pathway8.08E-03
66GO:0010224: response to UV-B8.28E-03
67GO:0048316: seed development9.29E-03
68GO:0009845: seed germination1.28E-02
69GO:0042744: hydrogen peroxide catabolic process1.33E-02
70GO:0006633: fatty acid biosynthetic process1.42E-02
71GO:0009409: response to cold1.86E-02
72GO:0009826: unidimensional cell growth2.02E-02
73GO:0046686: response to cadmium ion2.14E-02
74GO:0009860: pollen tube growth2.19E-02
75GO:0009723: response to ethylene2.30E-02
76GO:0010200: response to chitin2.48E-02
77GO:0016042: lipid catabolic process3.13E-02
78GO:0006629: lipid metabolic process3.19E-02
79GO:0008152: metabolic process3.42E-02
80GO:0009611: response to wounding4.88E-02
RankGO TermAdjusted P value
1GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
2GO:0015269: calcium-activated potassium channel activity0.00E+00
3GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
4GO:0080062: cytokinin 9-beta-glucosyltransferase activity2.64E-05
5GO:0047807: cytokinin 7-beta-glucosyltransferase activity2.64E-05
6GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity2.64E-05
7GO:0004853: uroporphyrinogen decarboxylase activity2.64E-05
8GO:0016630: protochlorophyllide reductase activity6.72E-05
9GO:0005464: UDP-xylose transmembrane transporter activity6.72E-05
10GO:0016851: magnesium chelatase activity1.76E-04
11GO:0009044: xylan 1,4-beta-xylosidase activity2.39E-04
12GO:0046556: alpha-L-arabinofuranosidase activity2.39E-04
13GO:0031177: phosphopantetheine binding3.78E-04
14GO:0015271: outward rectifier potassium channel activity3.78E-04
15GO:0004130: cytochrome-c peroxidase activity3.78E-04
16GO:0000035: acyl binding4.53E-04
17GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process6.10E-04
18GO:0005267: potassium channel activity6.94E-04
19GO:0047372: acylglycerol lipase activity1.05E-03
20GO:0008266: poly(U) RNA binding1.35E-03
21GO:0031409: pigment binding1.56E-03
22GO:0005216: ion channel activity1.78E-03
23GO:0033612: receptor serine/threonine kinase binding1.90E-03
24GO:0000156: phosphorelay response regulator activity3.33E-03
25GO:0005200: structural constituent of cytoskeleton3.62E-03
26GO:0016597: amino acid binding3.76E-03
27GO:0016168: chlorophyll binding4.06E-03
28GO:0005515: protein binding4.08E-03
29GO:0008289: lipid binding5.29E-03
30GO:0080043: quercetin 3-O-glucosyltransferase activity9.71E-03
31GO:0080044: quercetin 7-O-glucosyltransferase activity9.71E-03
32GO:0015297: antiporter activity1.47E-02
33GO:0008194: UDP-glycosyltransferase activity1.65E-02
34GO:0004601: peroxidase activity2.07E-02
35GO:0016788: hydrolase activity, acting on ester bonds2.10E-02
36GO:0052689: carboxylic ester hydrolase activity2.60E-02
37GO:0003924: GTPase activity3.19E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid3.72E-15
3GO:0009535: chloroplast thylakoid membrane5.08E-12
4GO:0009507: chloroplast3.95E-11
5GO:0009538: photosystem I reaction center2.23E-08
6GO:0009579: thylakoid4.14E-07
7GO:0009543: chloroplast thylakoid lumen1.99E-06
8GO:0031977: thylakoid lumen1.46E-05
9GO:0030095: chloroplast photosystem II3.34E-05
10GO:0009570: chloroplast stroma4.29E-05
11GO:0010287: plastoglobule6.14E-05
12GO:0010007: magnesium chelatase complex1.18E-04
13GO:0009941: chloroplast envelope1.30E-04
14GO:0042646: plastid nucleoid1.76E-04
15GO:0009517: PSII associated light-harvesting complex II2.39E-04
16GO:0016363: nuclear matrix4.53E-04
17GO:0045298: tubulin complex7.80E-04
18GO:0030076: light-harvesting complex1.45E-03
19GO:0009654: photosystem II oxygen evolving complex1.78E-03
20GO:0009522: photosystem I2.78E-03
21GO:0009523: photosystem II2.91E-03
22GO:0019898: extrinsic component of membrane2.91E-03
23GO:0009706: chloroplast inner membrane1.03E-02
24GO:0005618: cell wall1.24E-02
25GO:0016020: membrane1.74E-02
26GO:0005874: microtubule2.36E-02
27GO:0043231: intracellular membrane-bounded organelle3.42E-02
28GO:0016021: integral component of membrane3.49E-02
29GO:0005774: vacuolar membrane4.73E-02
30GO:0048046: apoplast4.96E-02
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Gene type



Gene DE type