Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G62770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
3GO:0043201: response to leucine0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:0046109: uridine biosynthetic process0.00E+00
6GO:0080053: response to phenylalanine0.00E+00
7GO:0080052: response to histidine0.00E+00
8GO:0006793: phosphorus metabolic process0.00E+00
9GO:0051238: sequestering of metal ion0.00E+00
10GO:0006182: cGMP biosynthetic process0.00E+00
11GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
12GO:0042742: defense response to bacterium2.01E-11
13GO:0009617: response to bacterium7.66E-10
14GO:0006468: protein phosphorylation2.19E-07
15GO:0006952: defense response3.42E-07
16GO:0010120: camalexin biosynthetic process4.05E-07
17GO:0009682: induced systemic resistance2.05E-06
18GO:0009751: response to salicylic acid4.67E-05
19GO:0002229: defense response to oomycetes6.76E-05
20GO:0052544: defense response by callose deposition in cell wall7.24E-05
21GO:0007165: signal transduction1.39E-04
22GO:0000162: tryptophan biosynthetic process1.83E-04
23GO:0009620: response to fungus1.91E-04
24GO:0009817: defense response to fungus, incompatible interaction2.14E-04
25GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.97E-04
26GO:0071456: cellular response to hypoxia3.14E-04
27GO:0051938: L-glutamate import4.10E-04
28GO:0006047: UDP-N-acetylglucosamine metabolic process4.10E-04
29GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.10E-04
30GO:0010726: positive regulation of hydrogen peroxide metabolic process4.10E-04
31GO:0006569: tryptophan catabolic process4.10E-04
32GO:1901183: positive regulation of camalexin biosynthetic process4.10E-04
33GO:0046244: salicylic acid catabolic process4.10E-04
34GO:0019276: UDP-N-acetylgalactosamine metabolic process4.10E-04
35GO:0032107: regulation of response to nutrient levels4.10E-04
36GO:0046167: glycerol-3-phosphate biosynthetic process4.10E-04
37GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.80E-04
38GO:0010150: leaf senescence6.32E-04
39GO:0010112: regulation of systemic acquired resistance7.02E-04
40GO:0015802: basic amino acid transport8.88E-04
41GO:0006641: triglyceride metabolic process8.88E-04
42GO:0051645: Golgi localization8.88E-04
43GO:0009866: induced systemic resistance, ethylene mediated signaling pathway8.88E-04
44GO:0044419: interspecies interaction between organisms8.88E-04
45GO:0042939: tripeptide transport8.88E-04
46GO:0060151: peroxisome localization8.88E-04
47GO:0043091: L-arginine import8.88E-04
48GO:0051592: response to calcium ion8.88E-04
49GO:0080183: response to photooxidative stress8.88E-04
50GO:0007064: mitotic sister chromatid cohesion9.63E-04
51GO:0009684: indoleacetic acid biosynthetic process1.11E-03
52GO:0050832: defense response to fungus1.25E-03
53GO:0006790: sulfur compound metabolic process1.27E-03
54GO:0012501: programmed cell death1.27E-03
55GO:0006011: UDP-glucose metabolic process1.44E-03
56GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.44E-03
57GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.44E-03
58GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.44E-03
59GO:0051646: mitochondrion localization1.44E-03
60GO:0019563: glycerol catabolic process1.44E-03
61GO:0090436: leaf pavement cell development1.44E-03
62GO:0010351: lithium ion transport1.44E-03
63GO:0015783: GDP-fucose transport1.44E-03
64GO:0070588: calcium ion transmembrane transport1.82E-03
65GO:0046854: phosphatidylinositol phosphorylation1.82E-03
66GO:0033169: histone H3-K9 demethylation2.08E-03
67GO:0002239: response to oomycetes2.08E-03
68GO:0006072: glycerol-3-phosphate metabolic process2.08E-03
69GO:0009052: pentose-phosphate shunt, non-oxidative branch2.08E-03
70GO:0006882: cellular zinc ion homeostasis2.08E-03
71GO:0019438: aromatic compound biosynthetic process2.08E-03
72GO:0010200: response to chitin2.11E-03
73GO:0080147: root hair cell development2.25E-03
74GO:0006874: cellular calcium ion homeostasis2.48E-03
75GO:0003333: amino acid transmembrane transport2.73E-03
76GO:0016998: cell wall macromolecule catabolic process2.73E-03
77GO:0045227: capsule polysaccharide biosynthetic process2.80E-03
78GO:0048830: adventitious root development2.80E-03
79GO:0033358: UDP-L-arabinose biosynthetic process2.80E-03
80GO:0071219: cellular response to molecule of bacterial origin2.80E-03
81GO:0010188: response to microbial phytotoxin2.80E-03
82GO:0080142: regulation of salicylic acid biosynthetic process2.80E-03
83GO:0042938: dipeptide transport2.80E-03
84GO:0009636: response to toxic substance3.38E-03
85GO:0006855: drug transmembrane transport3.54E-03
86GO:0000304: response to singlet oxygen3.59E-03
87GO:0034052: positive regulation of plant-type hypersensitive response3.59E-03
88GO:0030041: actin filament polymerization3.59E-03
89GO:0010256: endomembrane system organization4.44E-03
90GO:0002238: response to molecule of fungal origin4.44E-03
91GO:0009759: indole glucosinolate biosynthetic process4.44E-03
92GO:0006561: proline biosynthetic process4.44E-03
93GO:0010942: positive regulation of cell death4.44E-03
94GO:0015691: cadmium ion transport4.44E-03
95GO:2000067: regulation of root morphogenesis5.35E-03
96GO:0071470: cellular response to osmotic stress5.35E-03
97GO:0010555: response to mannitol5.35E-03
98GO:1900056: negative regulation of leaf senescence6.32E-03
99GO:0019745: pentacyclic triterpenoid biosynthetic process6.32E-03
100GO:0030026: cellular manganese ion homeostasis6.32E-03
101GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.32E-03
102GO:0080027: response to herbivore6.32E-03
103GO:0010252: auxin homeostasis6.70E-03
104GO:0010928: regulation of auxin mediated signaling pathway7.35E-03
105GO:0030091: protein repair7.35E-03
106GO:0009850: auxin metabolic process7.35E-03
107GO:0043068: positive regulation of programmed cell death7.35E-03
108GO:0080167: response to karrikin8.01E-03
109GO:0009699: phenylpropanoid biosynthetic process8.43E-03
110GO:0007186: G-protein coupled receptor signaling pathway8.43E-03
111GO:0009808: lignin metabolic process8.43E-03
112GO:0055114: oxidation-reduction process9.33E-03
113GO:0007338: single fertilization9.58E-03
114GO:0009821: alkaloid biosynthetic process9.58E-03
115GO:0051865: protein autoubiquitination9.58E-03
116GO:0015780: nucleotide-sugar transport9.58E-03
117GO:0008219: cell death1.05E-02
118GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.08E-02
119GO:0008202: steroid metabolic process1.08E-02
120GO:1900426: positive regulation of defense response to bacterium1.08E-02
121GO:0006499: N-terminal protein myristoylation1.16E-02
122GO:0009407: toxin catabolic process1.16E-02
123GO:0055062: phosphate ion homeostasis1.20E-02
124GO:0006032: chitin catabolic process1.20E-02
125GO:0043069: negative regulation of programmed cell death1.20E-02
126GO:0009641: shade avoidance1.20E-02
127GO:0048527: lateral root development1.21E-02
128GO:0016310: phosphorylation1.23E-02
129GO:0009089: lysine biosynthetic process via diaminopimelate1.33E-02
130GO:0009750: response to fructose1.33E-02
131GO:0032259: methylation1.35E-02
132GO:0002213: defense response to insect1.47E-02
133GO:0000266: mitochondrial fission1.47E-02
134GO:0006631: fatty acid metabolic process1.58E-02
135GO:0007166: cell surface receptor signaling pathway1.59E-02
136GO:0030048: actin filament-based movement1.61E-02
137GO:0006626: protein targeting to mitochondrion1.61E-02
138GO:2000028: regulation of photoperiodism, flowering1.61E-02
139GO:0055046: microgametogenesis1.61E-02
140GO:0009718: anthocyanin-containing compound biosynthetic process1.61E-02
141GO:0042542: response to hydrogen peroxide1.65E-02
142GO:0010468: regulation of gene expression1.68E-02
143GO:0051707: response to other organism1.72E-02
144GO:0048467: gynoecium development1.75E-02
145GO:0010143: cutin biosynthetic process1.75E-02
146GO:0002237: response to molecule of bacterial origin1.75E-02
147GO:0008643: carbohydrate transport1.86E-02
148GO:0009225: nucleotide-sugar metabolic process1.90E-02
149GO:0010025: wax biosynthetic process2.05E-02
150GO:0006508: proteolysis2.05E-02
151GO:0009846: pollen germination2.16E-02
152GO:0042538: hyperosmotic salinity response2.16E-02
153GO:0006812: cation transport2.16E-02
154GO:0009863: salicylic acid mediated signaling pathway2.21E-02
155GO:0030150: protein import into mitochondrial matrix2.21E-02
156GO:0005992: trehalose biosynthetic process2.21E-02
157GO:0009809: lignin biosynthetic process2.32E-02
158GO:0009814: defense response, incompatible interaction2.70E-02
159GO:0030433: ubiquitin-dependent ERAD pathway2.70E-02
160GO:0019748: secondary metabolic process2.70E-02
161GO:0009625: response to insect2.87E-02
162GO:0010227: floral organ abscission2.87E-02
163GO:0006012: galactose metabolic process2.87E-02
164GO:0009626: plant-type hypersensitive response2.93E-02
165GO:0010584: pollen exine formation3.05E-02
166GO:0045492: xylan biosynthetic process3.05E-02
167GO:0009561: megagametogenesis3.05E-02
168GO:0009611: response to wounding3.49E-02
169GO:0006885: regulation of pH3.60E-02
170GO:0048544: recognition of pollen3.79E-02
171GO:0006814: sodium ion transport3.79E-02
172GO:0042752: regulation of circadian rhythm3.79E-02
173GO:0006623: protein targeting to vacuole3.99E-02
174GO:0009749: response to glucose3.99E-02
175GO:0009851: auxin biosynthetic process3.99E-02
176GO:0000302: response to reactive oxygen species4.18E-02
177GO:0010193: response to ozone4.18E-02
178GO:0010583: response to cyclopentenone4.38E-02
179GO:0016032: viral process4.38E-02
180GO:0019761: glucosinolate biosynthetic process4.38E-02
181GO:0009630: gravitropism4.38E-02
182GO:0010090: trichome morphogenesis4.59E-02
183GO:0016042: lipid catabolic process4.77E-02
184GO:0009567: double fertilization forming a zygote and endosperm4.79E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
4GO:0004370: glycerol kinase activity0.00E+00
5GO:0016301: kinase activity4.68E-10
6GO:0004674: protein serine/threonine kinase activity1.36E-07
7GO:0005524: ATP binding1.65E-05
8GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity2.60E-05
9GO:0010279: indole-3-acetic acid amido synthetase activity9.96E-05
10GO:0005496: steroid binding1.54E-04
11GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.73E-04
12GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.97E-04
13GO:0102391: decanoate--CoA ligase activity2.97E-04
14GO:0004656: procollagen-proline 4-dioxygenase activity2.97E-04
15GO:0004467: long-chain fatty acid-CoA ligase activity3.84E-04
16GO:0004425: indole-3-glycerol-phosphate synthase activity4.10E-04
17GO:0033984: indole-3-glycerol-phosphate lyase activity4.10E-04
18GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity4.10E-04
19GO:0031957: very long-chain fatty acid-CoA ligase activity4.10E-04
20GO:0010285: L,L-diaminopimelate aminotransferase activity4.10E-04
21GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity4.10E-04
22GO:0032934: sterol binding8.88E-04
23GO:0030742: GTP-dependent protein binding8.88E-04
24GO:0050736: O-malonyltransferase activity8.88E-04
25GO:0019200: carbohydrate kinase activity8.88E-04
26GO:0042937: tripeptide transporter activity8.88E-04
27GO:0032454: histone demethylase activity (H3-K9 specific)8.88E-04
28GO:0004103: choline kinase activity8.88E-04
29GO:0004566: beta-glucuronidase activity8.88E-04
30GO:0008171: O-methyltransferase activity9.63E-04
31GO:0005388: calcium-transporting ATPase activity1.44E-03
32GO:0031683: G-protein beta/gamma-subunit complex binding1.44E-03
33GO:0004751: ribose-5-phosphate isomerase activity1.44E-03
34GO:0004383: guanylate cyclase activity1.44E-03
35GO:0016805: dipeptidase activity1.44E-03
36GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.44E-03
37GO:0005457: GDP-fucose transmembrane transporter activity1.44E-03
38GO:0001664: G-protein coupled receptor binding1.44E-03
39GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.46E-03
40GO:0015238: drug transmembrane transporter activity1.66E-03
41GO:0015189: L-lysine transmembrane transporter activity2.08E-03
42GO:0015181: arginine transmembrane transporter activity2.08E-03
43GO:0042299: lupeol synthase activity2.08E-03
44GO:0010178: IAA-amino acid conjugate hydrolase activity2.08E-03
45GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.11E-03
46GO:0031418: L-ascorbic acid binding2.25E-03
47GO:0005516: calmodulin binding2.33E-03
48GO:0015297: antiporter activity2.76E-03
49GO:0042936: dipeptide transporter activity2.80E-03
50GO:0015369: calcium:proton antiporter activity2.80E-03
51GO:0005313: L-glutamate transmembrane transporter activity2.80E-03
52GO:0016866: intramolecular transferase activity2.80E-03
53GO:0015368: calcium:cation antiporter activity2.80E-03
54GO:0050373: UDP-arabinose 4-epimerase activity2.80E-03
55GO:0004834: tryptophan synthase activity2.80E-03
56GO:0005452: inorganic anion exchanger activity3.59E-03
57GO:0017137: Rab GTPase binding3.59E-03
58GO:0004040: amidase activity3.59E-03
59GO:0045431: flavonol synthase activity3.59E-03
60GO:0015301: anion:anion antiporter activity3.59E-03
61GO:0047714: galactolipase activity4.44E-03
62GO:0004029: aldehyde dehydrogenase (NAD) activity4.44E-03
63GO:0004866: endopeptidase inhibitor activity4.44E-03
64GO:0009055: electron carrier activity4.47E-03
65GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.35E-03
66GO:0003978: UDP-glucose 4-epimerase activity5.35E-03
67GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.35E-03
68GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.35E-03
69GO:0008235: metalloexopeptidase activity6.32E-03
70GO:0050660: flavin adenine dinucleotide binding7.20E-03
71GO:0052747: sinapyl alcohol dehydrogenase activity7.35E-03
72GO:0004033: aldo-keto reductase (NADP) activity7.35E-03
73GO:0015491: cation:cation antiporter activity7.35E-03
74GO:0004714: transmembrane receptor protein tyrosine kinase activity7.35E-03
75GO:0008142: oxysterol binding8.43E-03
76GO:0008970: phosphatidylcholine 1-acylhydrolase activity8.43E-03
77GO:0030247: polysaccharide binding9.44E-03
78GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.08E-02
79GO:0015174: basic amino acid transmembrane transporter activity1.08E-02
80GO:0031490: chromatin DNA binding1.08E-02
81GO:0016844: strictosidine synthase activity1.08E-02
82GO:0005509: calcium ion binding1.11E-02
83GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.18E-02
84GO:0004568: chitinase activity1.20E-02
85GO:0030145: manganese ion binding1.21E-02
86GO:0005506: iron ion binding1.26E-02
87GO:0004177: aminopeptidase activity1.33E-02
88GO:0008559: xenobiotic-transporting ATPase activity1.33E-02
89GO:0000976: transcription regulatory region sequence-specific DNA binding1.47E-02
90GO:0045551: cinnamyl-alcohol dehydrogenase activity1.47E-02
91GO:0015266: protein channel activity1.61E-02
92GO:0004022: alcohol dehydrogenase (NAD) activity1.61E-02
93GO:0005262: calcium channel activity1.61E-02
94GO:0004364: glutathione transferase activity1.65E-02
95GO:0003774: motor activity1.75E-02
96GO:0030246: carbohydrate binding1.80E-02
97GO:0005217: intracellular ligand-gated ion channel activity1.90E-02
98GO:0004970: ionotropic glutamate receptor activity1.90E-02
99GO:0004190: aspartic-type endopeptidase activity1.90E-02
100GO:0001046: core promoter sequence-specific DNA binding2.21E-02
101GO:0004707: MAP kinase activity2.53E-02
102GO:0015171: amino acid transmembrane transporter activity2.57E-02
103GO:0004672: protein kinase activity2.68E-02
104GO:0016779: nucleotidyltransferase activity2.70E-02
105GO:0045735: nutrient reservoir activity2.75E-02
106GO:0008514: organic anion transmembrane transporter activity3.05E-02
107GO:0003779: actin binding3.21E-02
108GO:0015035: protein disulfide oxidoreductase activity3.40E-02
109GO:0005451: monovalent cation:proton antiporter activity3.41E-02
110GO:0015299: solute:proton antiporter activity3.79E-02
111GO:0015385: sodium:proton antiporter activity4.59E-02
112GO:0003924: GTPase activity4.93E-02
113GO:0008565: protein transporter activity4.93E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane2.25E-09
2GO:0005886: plasma membrane2.25E-08
3GO:0005911: cell-cell junction4.10E-04
4GO:0005783: endoplasmic reticulum5.92E-04
5GO:0005765: lysosomal membrane1.11E-03
6GO:0070062: extracellular exosome2.08E-03
7GO:0030660: Golgi-associated vesicle membrane2.80E-03
8GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.80E-03
9GO:0005770: late endosome4.47E-03
10GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane7.35E-03
11GO:0031305: integral component of mitochondrial inner membrane7.35E-03
12GO:0016459: myosin complex1.20E-02
13GO:0000325: plant-type vacuole1.21E-02
14GO:0005829: cytosol1.44E-02
15GO:0005576: extracellular region1.45E-02
16GO:0005744: mitochondrial inner membrane presequence translocase complex3.05E-02
17GO:0000785: chromatin4.38E-02
18GO:0000145: exocyst4.38E-02
19GO:0032580: Golgi cisterna membrane4.79E-02
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Gene type



Gene DE type