co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
2	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
5	GO:0000188: inactivation of MAPK activity	0.00E+00
6	GO:0010398: xylogalacturonan metabolic process	0.00E+00
7	GO:0043633: polyadenylation-dependent RNA catabolic process	0.00E+00
8	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
9	GO:0008219: cell death	1.63E-05
10	GO:0006468: protein phosphorylation	2.23E-05
11	GO:0009626: plant-type hypersensitive response	1.17E-04
12	GO:0035344: hypoxanthine transport	1.58E-04
13	GO:0071366: cellular response to indolebutyric acid stimulus	1.58E-04
14	GO:0031338: regulation of vesicle fusion	1.58E-04
15	GO:0098721: uracil import across plasma membrane	1.58E-04
16	GO:0006144: purine nucleobase metabolic process	1.58E-04
17	GO:0098702: adenine import across plasma membrane	1.58E-04
18	GO:1902466: positive regulation of histone H3-K27 trimethylation	1.58E-04
19	GO:0035266: meristem growth	1.58E-04
20	GO:0098710: guanine import across plasma membrane	1.58E-04
21	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.58E-04
22	GO:0007292: female gamete generation	1.58E-04
23	GO:0048482: plant ovule morphogenesis	1.58E-04
24	GO:0019628: urate catabolic process	1.58E-04
25	GO:0010941: regulation of cell death	1.58E-04
26	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.12E-04
27	GO:0043066: negative regulation of apoptotic process	3.60E-04
28	GO:0019483: beta-alanine biosynthetic process	3.60E-04
29	GO:0052542: defense response by callose deposition	3.60E-04
30	GO:0051258: protein polymerization	3.60E-04
31	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.60E-04
32	GO:0042325: regulation of phosphorylation	3.60E-04
33	GO:0050684: regulation of mRNA processing	3.60E-04
34	GO:0050994: regulation of lipid catabolic process	3.60E-04
35	GO:0006212: uracil catabolic process	3.60E-04
36	GO:0009727: detection of ethylene stimulus	3.60E-04
37	GO:0051788: response to misfolded protein	3.60E-04
38	GO:0042344: indole glucosinolate catabolic process	5.89E-04
39	GO:0032784: regulation of DNA-templated transcription, elongation	5.89E-04
40	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.89E-04
41	GO:0090630: activation of GTPase activity	5.89E-04
42	GO:0033523: histone H2B ubiquitination	5.89E-04
43	GO:0046621: negative regulation of organ growth	5.89E-04
44	GO:0060968: regulation of gene silencing	5.89E-04
45	GO:0031348: negative regulation of defense response	7.84E-04
46	GO:0002679: respiratory burst involved in defense response	8.43E-04
47	GO:0048194: Golgi vesicle budding	8.43E-04
48	GO:2001289: lipid X metabolic process	8.43E-04
49	GO:0070301: cellular response to hydrogen peroxide	8.43E-04
50	GO:0072334: UDP-galactose transmembrane transport	8.43E-04
51	GO:0015749: monosaccharide transport	8.43E-04
52	GO:0009650: UV protection	8.43E-04
53	GO:0009399: nitrogen fixation	8.43E-04
54	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.03E-03
55	GO:0046777: protein autophosphorylation	1.08E-03
56	GO:0006542: glutamine biosynthetic process	1.12E-03
57	GO:0033320: UDP-D-xylose biosynthetic process	1.12E-03
58	GO:0046323: glucose import	1.15E-03
59	GO:0048544: recognition of pollen	1.24E-03
60	GO:0006090: pyruvate metabolic process	1.41E-03
61	GO:0005513: detection of calcium ion	1.41E-03
62	GO:0010225: response to UV-C	1.41E-03
63	GO:0048015: phosphatidylinositol-mediated signaling	1.41E-03
64	GO:1900425: negative regulation of defense response to bacterium	1.74E-03
65	GO:0010337: regulation of salicylic acid metabolic process	1.74E-03
66	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.74E-03
67	GO:0015691: cadmium ion transport	1.74E-03
68	GO:0048827: phyllome development	1.74E-03
69	GO:0048232: male gamete generation	1.74E-03
70	GO:0043248: proteasome assembly	1.74E-03
71	GO:0042732: D-xylose metabolic process	1.74E-03
72	GO:0048317: seed morphogenesis	1.74E-03
73	GO:0051607: defense response to virus	1.92E-03
74	GO:0009612: response to mechanical stimulus	2.09E-03
75	GO:0009627: systemic acquired resistance	2.26E-03
76	GO:0006950: response to stress	2.38E-03
77	GO:0006955: immune response	2.45E-03
78	GO:0006470: protein dephosphorylation	2.74E-03
79	GO:0010311: lateral root formation	2.77E-03
80	GO:0006491: N-glycan processing	2.84E-03
81	GO:1900150: regulation of defense response to fungus	2.84E-03
82	GO:0006875: cellular metal ion homeostasis	2.84E-03
83	GO:0010078: maintenance of root meristem identity	2.84E-03
84	GO:0032875: regulation of DNA endoreduplication	2.84E-03
85	GO:0009819: drought recovery	2.84E-03
86	GO:0009617: response to bacterium	2.89E-03
87	GO:0006499: N-terminal protein myristoylation	2.90E-03
88	GO:0030968: endoplasmic reticulum unfolded protein response	3.25E-03
89	GO:0043562: cellular response to nitrogen levels	3.25E-03
90	GO:0006303: double-strand break repair via nonhomologous end joining	3.25E-03
91	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.25E-03
92	GO:0045087: innate immune response	3.33E-03
93	GO:0010112: regulation of systemic acquired resistance	3.67E-03
94	GO:0009051: pentose-phosphate shunt, oxidative branch	3.67E-03
95	GO:0009821: alkaloid biosynthetic process	3.67E-03
96	GO:0051865: protein autoubiquitination	3.67E-03
97	GO:0006897: endocytosis	3.95E-03
98	GO:0000723: telomere maintenance	4.12E-03
99	GO:0007064: mitotic sister chromatid cohesion	4.58E-03
100	GO:0043069: negative regulation of programmed cell death	4.58E-03
101	GO:0048829: root cap development	4.58E-03
102	GO:0010629: negative regulation of gene expression	4.58E-03
103	GO:0072593: reactive oxygen species metabolic process	5.05E-03
104	GO:0030148: sphingolipid biosynthetic process	5.05E-03
105	GO:0010015: root morphogenesis	5.05E-03
106	GO:0000038: very long-chain fatty acid metabolic process	5.05E-03
107	GO:0009682: induced systemic resistance	5.05E-03
108	GO:0052544: defense response by callose deposition in cell wall	5.05E-03
109	GO:0031347: regulation of defense response	5.19E-03
110	GO:0010200: response to chitin	5.51E-03
111	GO:0071365: cellular response to auxin stimulus	5.55E-03
112	GO:0006108: malate metabolic process	6.06E-03
113	GO:0055046: microgametogenesis	6.06E-03
114	GO:0009933: meristem structural organization	6.59E-03
115	GO:0007034: vacuolar transport	6.59E-03
116	GO:0090351: seedling development	7.13E-03
117	GO:0046854: phosphatidylinositol phosphorylation	7.13E-03
118	GO:0009225: nucleotide-sugar metabolic process	7.13E-03
119	GO:0007031: peroxisome organization	7.13E-03
120	GO:0080188: RNA-directed DNA methylation	7.13E-03
121	GO:0009751: response to salicylic acid	8.50E-03
122	GO:0009408: response to heat	8.66E-03
123	GO:0009742: brassinosteroid mediated signaling pathway	8.71E-03
124	GO:0006825: copper ion transport	8.86E-03
125	GO:0009651: response to salt stress	9.02E-03
126	GO:0031408: oxylipin biosynthetic process	9.46E-03
127	GO:0051260: protein homooligomerization	9.46E-03
128	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.01E-02
129	GO:0030433: ubiquitin-dependent ERAD pathway	1.01E-02
130	GO:0071456: cellular response to hypoxia	1.01E-02
131	GO:0071369: cellular response to ethylene stimulus	1.07E-02
132	GO:0009625: response to insect	1.07E-02
133	GO:0071215: cellular response to abscisic acid stimulus	1.07E-02
134	GO:0042742: defense response to bacterium	1.22E-02
135	GO:0042631: cellular response to water deprivation	1.27E-02
136	GO:0045489: pectin biosynthetic process	1.34E-02
137	GO:0006885: regulation of pH	1.34E-02
138	GO:0010150: leaf senescence	1.42E-02
139	GO:0016310: phosphorylation	1.55E-02
140	GO:0002229: defense response to oomycetes	1.56E-02
141	GO:0000302: response to reactive oxygen species	1.56E-02
142	GO:0006635: fatty acid beta-oxidation	1.56E-02
143	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.59E-02
144	GO:0007166: cell surface receptor signaling pathway	1.63E-02
145	GO:0007264: small GTPase mediated signal transduction	1.63E-02
146	GO:0006914: autophagy	1.78E-02
147	GO:0006310: DNA recombination	1.78E-02
148	GO:0006904: vesicle docking involved in exocytosis	1.86E-02
149	GO:0001666: response to hypoxia	2.02E-02
150	GO:0009615: response to virus	2.02E-02
151	GO:0010029: regulation of seed germination	2.10E-02
152	GO:0009816: defense response to bacterium, incompatible interaction	2.10E-02
153	GO:0042128: nitrate assimilation	2.19E-02
154	GO:0048573: photoperiodism, flowering	2.27E-02
155	GO:0016049: cell growth	2.36E-02
156	GO:0046686: response to cadmium ion	2.37E-02
157	GO:0009817: defense response to fungus, incompatible interaction	2.44E-02
158	GO:0009723: response to ethylene	2.56E-02
159	GO:0006511: ubiquitin-dependent protein catabolic process	2.64E-02
160	GO:0010119: regulation of stomatal movement	2.71E-02
161	GO:0016192: vesicle-mediated transport	2.88E-02
162	GO:0006099: tricarboxylic acid cycle	2.98E-02
163	GO:0006887: exocytosis	3.27E-02
164	GO:0045454: cell redox homeostasis	3.28E-02
165	GO:0006886: intracellular protein transport	3.38E-02
166	GO:0000209: protein polyubiquitination	3.56E-02
167	GO:0009737: response to abscisic acid	3.75E-02
168	GO:0009965: leaf morphogenesis	3.76E-02
169	GO:0006855: drug transmembrane transport	3.86E-02
170	GO:0006281: DNA repair	4.03E-02
171	GO:0006812: cation transport	4.07E-02
172	GO:0006364: rRNA processing	4.28E-02
173	GO:0006813: potassium ion transport	4.28E-02
174	GO:0010224: response to UV-B	4.38E-02
175	GO:0048367: shoot system development	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
2	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
5	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
6	GO:0004157: dihydropyrimidinase activity	0.00E+00
7	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
8	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
9	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
10	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
11	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
12	GO:0005524: ATP binding	1.77E-06
13	GO:0004674: protein serine/threonine kinase activity	1.33E-05
14	GO:0015145: monosaccharide transmembrane transporter activity	3.21E-05
15	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.58E-04
16	GO:0015207: adenine transmembrane transporter activity	1.58E-04
17	GO:0015168: glycerol transmembrane transporter activity	1.58E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.58E-04
19	GO:0009679: hexose:proton symporter activity	1.58E-04
20	GO:0016303: 1-phosphatidylinositol-3-kinase activity	1.58E-04
21	GO:0015208: guanine transmembrane transporter activity	1.58E-04
22	GO:0015294: solute:cation symporter activity	1.58E-04
23	GO:0016301: kinase activity	1.84E-04
24	GO:0015144: carbohydrate transmembrane transporter activity	2.87E-04
25	GO:0005351: sugar:proton symporter activity	3.48E-04
26	GO:0045140: inositol phosphoceramide synthase activity	3.60E-04
27	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.82E-04
28	GO:0004725: protein tyrosine phosphatase activity	5.37E-04
29	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.89E-04
30	GO:0004383: guanylate cyclase activity	5.89E-04
31	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	5.89E-04
32	GO:0019829: cation-transporting ATPase activity	5.89E-04
33	GO:0043130: ubiquitin binding	5.95E-04
34	GO:0015086: cadmium ion transmembrane transporter activity	8.43E-04
35	GO:0004300: enoyl-CoA hydratase activity	8.43E-04
36	GO:0005354: galactose transmembrane transporter activity	8.43E-04
37	GO:0001653: peptide receptor activity	8.43E-04
38	GO:0019199: transmembrane receptor protein kinase activity	1.12E-03
39	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.12E-03
40	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.12E-03
41	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.12E-03
42	GO:0015210: uracil transmembrane transporter activity	1.12E-03
43	GO:0004470: malic enzyme activity	1.12E-03
44	GO:0017137: Rab GTPase binding	1.41E-03
45	GO:0004356: glutamate-ammonia ligase activity	1.41E-03
46	GO:0005459: UDP-galactose transmembrane transporter activity	1.41E-03
47	GO:0008948: oxaloacetate decarboxylase activity	1.41E-03
48	GO:0030246: carbohydrate binding	1.58E-03
49	GO:0035252: UDP-xylosyltransferase activity	1.74E-03
50	GO:0036402: proteasome-activating ATPase activity	1.74E-03
51	GO:0048040: UDP-glucuronate decarboxylase activity	1.74E-03
52	GO:0004672: protein kinase activity	1.78E-03
53	GO:0004012: phospholipid-translocating ATPase activity	2.09E-03
54	GO:0070403: NAD+ binding	2.09E-03
55	GO:0004620: phospholipase activity	2.45E-03
56	GO:0042162: telomeric DNA binding	2.45E-03
57	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.84E-03
58	GO:0005375: copper ion transmembrane transporter activity	3.25E-03
59	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	3.67E-03
60	GO:0004003: ATP-dependent DNA helicase activity	3.67E-03
61	GO:0071949: FAD binding	3.67E-03
62	GO:0016844: strictosidine synthase activity	4.12E-03
63	GO:0004713: protein tyrosine kinase activity	4.58E-03
64	GO:0047372: acylglycerol lipase activity	5.05E-03
65	GO:0004521: endoribonuclease activity	5.55E-03
66	GO:0019888: protein phosphatase regulator activity	6.06E-03
67	GO:0017025: TBP-class protein binding	7.13E-03
68	GO:0005516: calmodulin binding	7.80E-03
69	GO:0043424: protein histidine kinase binding	8.86E-03
70	GO:0033612: receptor serine/threonine kinase binding	9.46E-03
71	GO:0008408: 3'-5' exonuclease activity	9.46E-03
72	GO:0005515: protein binding	9.54E-03
73	GO:0003727: single-stranded RNA binding	1.14E-02
74	GO:0005451: monovalent cation:proton antiporter activity	1.27E-02
75	GO:0010181: FMN binding	1.41E-02
76	GO:0015299: solute:proton antiporter activity	1.41E-02
77	GO:0005355: glucose transmembrane transporter activity	1.41E-02
78	GO:0016887: ATPase activity	1.51E-02
79	GO:0015385: sodium:proton antiporter activity	1.71E-02
80	GO:0003684: damaged DNA binding	1.78E-02
81	GO:0051213: dioxygenase activity	2.02E-02
82	GO:0046982: protein heterodimerization activity	2.17E-02
83	GO:0008375: acetylglucosaminyltransferase activity	2.19E-02
84	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.19E-02
85	GO:0003729: mRNA binding	2.22E-02
86	GO:0030247: polysaccharide binding	2.27E-02
87	GO:0004683: calmodulin-dependent protein kinase activity	2.27E-02
88	GO:0005096: GTPase activator activity	2.53E-02
89	GO:0050897: cobalt ion binding	2.71E-02
90	GO:0004497: monooxygenase activity	2.74E-02
91	GO:0061630: ubiquitin protein ligase activity	2.88E-02
92	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.89E-02
93	GO:0003993: acid phosphatase activity	2.98E-02
94	GO:0004722: protein serine/threonine phosphatase activity	3.59E-02
95	GO:0005509: calcium ion binding	3.91E-02
96	GO:0051287: NAD binding	3.96E-02
97	GO:0003690: double-stranded DNA binding	4.38E-02
98	GO:0016298: lipase activity	4.38E-02
99	GO:0031625: ubiquitin protein ligase binding	4.60E-02
100	GO:0045330: aspartyl esterase activity	4.60E-02
101	GO:0045735: nutrient reservoir activity	4.82E-02
102	GO:0003824: catalytic activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005942: phosphatidylinositol 3-kinase complex	0.00E+00
2	GO:0005886: plasma membrane	1.15E-08
3	GO:0016021: integral component of membrane	2.51E-05
4	GO:0016020: membrane	8.13E-05
5	GO:0043564: Ku70:Ku80 complex	1.58E-04
6	GO:0045252: oxoglutarate dehydrogenase complex	1.58E-04
7	GO:0000176: nuclear exosome (RNase complex)	5.89E-04
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.89E-04
9	GO:0005783: endoplasmic reticulum	6.90E-04
10	GO:0005794: Golgi apparatus	1.57E-03
11	GO:0031597: cytosolic proteasome complex	2.09E-03
12	GO:0000815: ESCRT III complex	2.09E-03
13	GO:0030173: integral component of Golgi membrane	2.09E-03
14	GO:0031595: nuclear proteasome complex	2.45E-03
15	GO:0030131: clathrin adaptor complex	2.84E-03
16	GO:0000784: nuclear chromosome, telomeric region	3.25E-03
17	GO:0008540: proteasome regulatory particle, base subcomplex	4.12E-03
18	GO:0030125: clathrin vesicle coat	4.58E-03
19	GO:0048471: perinuclear region of cytoplasm	5.05E-03
20	GO:0030176: integral component of endoplasmic reticulum membrane	7.13E-03
21	GO:0005795: Golgi stack	7.13E-03
22	GO:0043234: protein complex	7.69E-03
23	GO:0012505: endomembrane system	7.97E-03
24	GO:0005802: trans-Golgi network	8.58E-03
25	GO:0005905: clathrin-coated pit	9.46E-03
26	GO:0005774: vacuolar membrane	9.59E-03
27	GO:0005768: endosome	1.04E-02
28	GO:0000145: exocyst	1.63E-02
29	GO:0071944: cell periphery	1.71E-02
30	GO:0005773: vacuole	2.17E-02
31	GO:0009506: plasmodesma	2.32E-02
32	GO:0000151: ubiquitin ligase complex	2.44E-02
33	GO:0005829: cytosol	2.74E-02
34	GO:0000786: nucleosome	2.80E-02
35	GO:0005622: intracellular	3.68E-02
36	GO:0000502: proteasome complex	4.28E-02
37	GO:0005635: nuclear envelope	4.49E-02
38	GO:0010008: endosome membrane	4.93E-02