co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
2	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0006182: cGMP biosynthetic process	0.00E+00
5	GO:0072722: response to amitrole	0.00E+00
6	GO:0006592: ornithine biosynthetic process	0.00E+00
7	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
8	GO:0043201: response to leucine	0.00E+00
9	GO:0080053: response to phenylalanine	0.00E+00
10	GO:0002376: immune system process	0.00E+00
11	GO:0080052: response to histidine	0.00E+00
12	GO:0048227: plasma membrane to endosome transport	0.00E+00
13	GO:0006983: ER overload response	0.00E+00
14	GO:0010150: leaf senescence	1.38E-06
15	GO:0006212: uracil catabolic process	3.02E-06
16	GO:0019483: beta-alanine biosynthetic process	3.02E-06
17	GO:0042742: defense response to bacterium	5.64E-05
18	GO:0018344: protein geranylgeranylation	7.11E-05
19	GO:0006952: defense response	1.14E-04
20	GO:0009612: response to mechanical stimulus	1.43E-04
21	GO:0098721: uracil import across plasma membrane	2.55E-04
22	GO:0042759: long-chain fatty acid biosynthetic process	2.55E-04
23	GO:0098702: adenine import across plasma membrane	2.55E-04
24	GO:0098710: guanine import across plasma membrane	2.55E-04
25	GO:0010941: regulation of cell death	2.55E-04
26	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.55E-04
27	GO:0035344: hypoxanthine transport	2.55E-04
28	GO:0018343: protein farnesylation	2.55E-04
29	GO:0002143: tRNA wobble position uridine thiolation	2.55E-04
30	GO:0043562: cellular response to nitrogen levels	2.94E-04
31	GO:0007264: small GTPase mediated signal transduction	3.12E-04
32	GO:0009821: alkaloid biosynthetic process	3.55E-04
33	GO:0009615: response to virus	4.65E-04
34	GO:0043069: negative regulation of programmed cell death	4.92E-04
35	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.64E-04
36	GO:0042325: regulation of phosphorylation	5.64E-04
37	GO:0019441: tryptophan catabolic process to kynurenine	5.64E-04
38	GO:0080183: response to photooxidative stress	5.64E-04
39	GO:0043066: negative regulation of apoptotic process	5.64E-04
40	GO:0051258: protein polymerization	5.64E-04
41	GO:0042939: tripeptide transport	5.64E-04
42	GO:1902000: homogentisate catabolic process	5.64E-04
43	GO:0018342: protein prenylation	9.15E-04
44	GO:0010272: response to silver ion	9.15E-04
45	GO:0009072: aromatic amino acid family metabolic process	9.15E-04
46	GO:0048281: inflorescence morphogenesis	9.15E-04
47	GO:1900055: regulation of leaf senescence	9.15E-04
48	GO:0010498: proteasomal protein catabolic process	9.15E-04
49	GO:0006468: protein phosphorylation	1.03E-03
50	GO:0006631: fatty acid metabolic process	1.09E-03
51	GO:0009751: response to salicylic acid	1.12E-03
52	GO:2000377: regulation of reactive oxygen species metabolic process	1.14E-03
53	GO:0001676: long-chain fatty acid metabolic process	1.31E-03
54	GO:0046513: ceramide biosynthetic process	1.31E-03
55	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.31E-03
56	GO:0048194: Golgi vesicle budding	1.31E-03
57	GO:0072334: UDP-galactose transmembrane transport	1.31E-03
58	GO:0009399: nitrogen fixation	1.31E-03
59	GO:0042938: dipeptide transport	1.75E-03
60	GO:0006542: glutamine biosynthetic process	1.75E-03
61	GO:0033320: UDP-D-xylose biosynthetic process	1.75E-03
62	GO:0010483: pollen tube reception	1.75E-03
63	GO:0005513: detection of calcium ion	2.23E-03
64	GO:0007029: endoplasmic reticulum organization	2.23E-03
65	GO:0009620: response to fungus	2.44E-03
66	GO:0002238: response to molecule of fungal origin	2.75E-03
67	GO:0006561: proline biosynthetic process	2.75E-03
68	GO:0010942: positive regulation of cell death	2.75E-03
69	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.75E-03
70	GO:0042732: D-xylose metabolic process	2.75E-03
71	GO:1900425: negative regulation of defense response to bacterium	2.75E-03
72	GO:0010200: response to chitin	2.89E-03
73	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.30E-03
74	GO:0000911: cytokinesis by cell plate formation	3.30E-03
75	GO:1902074: response to salt	3.89E-03
76	GO:0043090: amino acid import	3.89E-03
77	GO:1900056: negative regulation of leaf senescence	3.89E-03
78	GO:0070370: cellular heat acclimation	3.89E-03
79	GO:0042128: nitrate assimilation	4.44E-03
80	GO:0009819: drought recovery	4.52E-03
81	GO:1900150: regulation of defense response to fungus	4.52E-03
82	GO:0009850: auxin metabolic process	4.52E-03
83	GO:0006526: arginine biosynthetic process	5.18E-03
84	GO:0030968: endoplasmic reticulum unfolded protein response	5.18E-03
85	GO:0006303: double-strand break repair via nonhomologous end joining	5.18E-03
86	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.18E-03
87	GO:0006367: transcription initiation from RNA polymerase II promoter	5.18E-03
88	GO:0010120: camalexin biosynthetic process	5.18E-03
89	GO:0015031: protein transport	5.22E-03
90	GO:0006499: N-terminal protein myristoylation	5.71E-03
91	GO:0009407: toxin catabolic process	5.71E-03
92	GO:0007338: single fertilization	5.86E-03
93	GO:0008202: steroid metabolic process	6.58E-03
94	GO:0000723: telomere maintenance	6.58E-03
95	GO:0006032: chitin catabolic process	7.33E-03
96	GO:0010629: negative regulation of gene expression	7.33E-03
97	GO:0046686: response to cadmium ion	7.76E-03
98	GO:0000272: polysaccharide catabolic process	8.11E-03
99	GO:0030148: sphingolipid biosynthetic process	8.11E-03
100	GO:0000038: very long-chain fatty acid metabolic process	8.11E-03
101	GO:0072593: reactive oxygen species metabolic process	8.11E-03
102	GO:0071365: cellular response to auxin stimulus	8.92E-03
103	GO:0000266: mitochondrial fission	8.92E-03
104	GO:0015706: nitrate transport	8.92E-03
105	GO:0055046: microgametogenesis	9.75E-03
106	GO:0009718: anthocyanin-containing compound biosynthetic process	9.75E-03
107	GO:0006807: nitrogen compound metabolic process	9.75E-03
108	GO:0009934: regulation of meristem structural organization	1.06E-02
109	GO:0042538: hyperosmotic salinity response	1.06E-02
110	GO:0034605: cellular response to heat	1.06E-02
111	GO:0010143: cutin biosynthetic process	1.06E-02
112	GO:0002237: response to molecule of bacterial origin	1.06E-02
113	GO:0009809: lignin biosynthetic process	1.14E-02
114	GO:0070588: calcium ion transmembrane transport	1.15E-02
115	GO:0010053: root epidermal cell differentiation	1.15E-02
116	GO:0009225: nucleotide-sugar metabolic process	1.15E-02
117	GO:0010167: response to nitrate	1.15E-02
118	GO:0010025: wax biosynthetic process	1.24E-02
119	GO:0034976: response to endoplasmic reticulum stress	1.24E-02
120	GO:0005992: trehalose biosynthetic process	1.34E-02
121	GO:0000027: ribosomal large subunit assembly	1.34E-02
122	GO:0009863: salicylic acid mediated signaling pathway	1.34E-02
123	GO:0006096: glycolytic process	1.35E-02
124	GO:0016998: cell wall macromolecule catabolic process	1.53E-02
125	GO:0045454: cell redox homeostasis	1.58E-02
126	GO:0006886: intracellular protein transport	1.65E-02
127	GO:0006012: galactose metabolic process	1.74E-02
128	GO:0009306: protein secretion	1.85E-02
129	GO:0009561: megagametogenesis	1.85E-02
130	GO:0042127: regulation of cell proliferation	1.85E-02
131	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.95E-02
132	GO:0009058: biosynthetic process	2.16E-02
133	GO:0008360: regulation of cell shape	2.18E-02
134	GO:0009753: response to jasmonic acid	2.25E-02
135	GO:0048544: recognition of pollen	2.29E-02
136	GO:0061025: membrane fusion	2.29E-02
137	GO:0008654: phospholipid biosynthetic process	2.41E-02
138	GO:0006623: protein targeting to vacuole	2.41E-02
139	GO:0006891: intra-Golgi vesicle-mediated transport	2.53E-02
140	GO:0071554: cell wall organization or biogenesis	2.53E-02
141	GO:0002229: defense response to oomycetes	2.53E-02
142	GO:0000302: response to reactive oxygen species	2.53E-02
143	GO:0010193: response to ozone	2.53E-02
144	GO:0006633: fatty acid biosynthetic process	2.57E-02
145	GO:0010583: response to cyclopentenone	2.65E-02
146	GO:0050832: defense response to fungus	2.67E-02
147	GO:0006508: proteolysis	2.84E-02
148	GO:0006914: autophagy	2.90E-02
149	GO:0006310: DNA recombination	2.90E-02
150	GO:0009567: double fertilization forming a zygote and endosperm	2.90E-02
151	GO:0006904: vesicle docking involved in exocytosis	3.03E-02
152	GO:0000910: cytokinesis	3.16E-02
153	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.16E-02
154	GO:0007166: cell surface receptor signaling pathway	3.23E-02
155	GO:0009617: response to bacterium	3.37E-02
156	GO:0009607: response to biotic stimulus	3.42E-02
157	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.42E-02
158	GO:0006979: response to oxidative stress	3.42E-02
159	GO:0009627: systemic acquired resistance	3.56E-02
160	GO:0006950: response to stress	3.70E-02
161	GO:0009735: response to cytokinin	3.77E-02
162	GO:0009737: response to abscisic acid	3.87E-02
163	GO:0008219: cell death	3.97E-02
164	GO:0009813: flavonoid biosynthetic process	4.12E-02
165	GO:0009611: response to wounding	4.32E-02
166	GO:0010043: response to zinc ion	4.41E-02
167	GO:0006865: amino acid transport	4.55E-02
168	GO:0006970: response to osmotic stress	4.69E-02
169	GO:0006099: tricarboxylic acid cycle	4.85E-02
170	GO:0007049: cell cycle	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0004157: dihydropyrimidinase activity	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0004660: protein farnesyltransferase activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0004168: dolichol kinase activity	0.00E+00
7	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
8	GO:0003837: beta-ureidopropionase activity	0.00E+00
9	GO:0070577: lysine-acetylated histone binding	0.00E+00
10	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
11	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
12	GO:0102391: decanoate--CoA ligase activity	2.15E-06
13	GO:0004467: long-chain fatty acid-CoA ligase activity	3.47E-06
14	GO:0005093: Rab GDP-dissociation inhibitor activity	1.09E-05
15	GO:0005524: ATP binding	3.20E-05
16	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.55E-04
17	GO:0015208: guanine transmembrane transporter activity	2.55E-04
18	GO:0015294: solute:cation symporter activity	2.55E-04
19	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.55E-04
20	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.55E-04
21	GO:0015207: adenine transmembrane transporter activity	2.55E-04
22	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.55E-04
23	GO:0019707: protein-cysteine S-acyltransferase activity	2.55E-04
24	GO:0030955: potassium ion binding	4.21E-04
25	GO:0016844: strictosidine synthase activity	4.21E-04
26	GO:0004743: pyruvate kinase activity	4.21E-04
27	GO:0016301: kinase activity	4.52E-04
28	GO:0004713: protein tyrosine kinase activity	4.92E-04
29	GO:0042937: tripeptide transporter activity	5.64E-04
30	GO:0050291: sphingosine N-acyltransferase activity	5.64E-04
31	GO:0032934: sterol binding	5.64E-04
32	GO:0045140: inositol phosphoceramide synthase activity	5.64E-04
33	GO:0004061: arylformamidase activity	5.64E-04
34	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	5.64E-04
35	GO:0005096: GTPase activator activity	6.95E-04
36	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.37E-04
37	GO:0004383: guanylate cyclase activity	9.15E-04
38	GO:0016805: dipeptidase activity	9.15E-04
39	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	9.15E-04
40	GO:0008430: selenium binding	9.15E-04
41	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.15E-04
42	GO:0004663: Rab geranylgeranyltransferase activity	9.15E-04
43	GO:0004364: glutathione transferase activity	1.14E-03
44	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.31E-03
45	GO:0004792: thiosulfate sulfurtransferase activity	1.31E-03
46	GO:0042936: dipeptide transporter activity	1.75E-03
47	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.75E-03
48	GO:0015210: uracil transmembrane transporter activity	1.75E-03
49	GO:0070628: proteasome binding	1.75E-03
50	GO:0000287: magnesium ion binding	1.92E-03
51	GO:0043565: sequence-specific DNA binding	2.01E-03
52	GO:0004356: glutamate-ammonia ligase activity	2.23E-03
53	GO:0045431: flavonol synthase activity	2.23E-03
54	GO:0005459: UDP-galactose transmembrane transporter activity	2.23E-03
55	GO:0008641: small protein activating enzyme activity	2.23E-03
56	GO:0017137: Rab GTPase binding	2.23E-03
57	GO:0048040: UDP-glucuronate decarboxylase activity	2.75E-03
58	GO:0004605: phosphatidate cytidylyltransferase activity	2.75E-03
59	GO:0004602: glutathione peroxidase activity	3.30E-03
60	GO:0070403: NAD+ binding	3.30E-03
61	GO:0004012: phospholipid-translocating ATPase activity	3.30E-03
62	GO:0003978: UDP-glucose 4-epimerase activity	3.30E-03
63	GO:0008237: metallopeptidase activity	3.54E-03
64	GO:0043295: glutathione binding	3.89E-03
65	GO:0008235: metalloexopeptidase activity	3.89E-03
66	GO:0042162: telomeric DNA binding	3.89E-03
67	GO:0004311: farnesyltranstransferase activity	4.52E-03
68	GO:0052747: sinapyl alcohol dehydrogenase activity	4.52E-03
69	GO:0004674: protein serine/threonine kinase activity	4.72E-03
70	GO:0008142: oxysterol binding	5.18E-03
71	GO:0003843: 1,3-beta-D-glucan synthase activity	5.18E-03
72	GO:0004003: ATP-dependent DNA helicase activity	5.86E-03
73	GO:0071949: FAD binding	5.86E-03
74	GO:0003678: DNA helicase activity	5.86E-03
75	GO:0015112: nitrate transmembrane transporter activity	6.58E-03
76	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.17E-03
77	GO:0004568: chitinase activity	7.33E-03
78	GO:0008171: O-methyltransferase activity	7.33E-03
79	GO:0004177: aminopeptidase activity	8.11E-03
80	GO:0005543: phospholipid binding	8.11E-03
81	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.92E-03
82	GO:0005515: protein binding	9.49E-03
83	GO:0019888: protein phosphatase regulator activity	9.75E-03
84	GO:0005388: calcium-transporting ATPase activity	9.75E-03
85	GO:0043531: ADP binding	1.08E-02
86	GO:0004190: aspartic-type endopeptidase activity	1.15E-02
87	GO:0008061: chitin binding	1.15E-02
88	GO:0003954: NADH dehydrogenase activity	1.34E-02
89	GO:0043130: ubiquitin binding	1.34E-02
90	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.53E-02
91	GO:0046872: metal ion binding	1.55E-02
92	GO:0015035: protein disulfide oxidoreductase activity	1.68E-02
93	GO:0016491: oxidoreductase activity	1.73E-02
94	GO:0003756: protein disulfide isomerase activity	1.85E-02
95	GO:0016853: isomerase activity	2.29E-02
96	GO:0010181: FMN binding	2.29E-02
97	GO:0008565: protein transporter activity	2.45E-02
98	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.64E-02
99	GO:0003684: damaged DNA binding	2.90E-02
100	GO:0005509: calcium ion binding	3.01E-02
101	GO:0016413: O-acetyltransferase activity	3.16E-02
102	GO:0051213: dioxygenase activity	3.29E-02
103	GO:0004004: ATP-dependent RNA helicase activity	3.70E-02
104	GO:0030247: polysaccharide binding	3.70E-02
105	GO:0004601: peroxidase activity	4.36E-02
106	GO:0030145: manganese ion binding	4.41E-02
107	GO:0003697: single-stranded DNA binding	4.70E-02
108	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005886: plasma membrane	1.58E-09
3	GO:0005968: Rab-protein geranylgeranyltransferase complex	2.46E-05
4	GO:0005783: endoplasmic reticulum	9.01E-05
5	GO:0005829: cytosol	2.34E-04
6	GO:0000138: Golgi trans cisterna	2.55E-04
7	GO:0043564: Ku70:Ku80 complex	2.55E-04
8	GO:0045252: oxoglutarate dehydrogenase complex	2.55E-04
9	GO:0005965: protein farnesyltransferase complex	2.55E-04
10	GO:0005773: vacuole	3.06E-04
11	GO:0031304: intrinsic component of mitochondrial inner membrane	5.64E-04
12	GO:0005794: Golgi apparatus	5.82E-04
13	GO:0030176: integral component of endoplasmic reticulum membrane	9.26E-04
14	GO:0016021: integral component of membrane	1.80E-03
15	GO:0009504: cell plate	2.57E-03
16	GO:0030173: integral component of Golgi membrane	3.30E-03
17	GO:0000784: nuclear chromosome, telomeric region	5.18E-03
18	GO:0000148: 1,3-beta-D-glucan synthase complex	5.18E-03
19	GO:0017119: Golgi transport complex	7.33E-03
20	GO:0005789: endoplasmic reticulum membrane	7.47E-03
21	GO:0005795: Golgi stack	1.15E-02
22	GO:0005769: early endosome	1.24E-02
23	GO:0005839: proteasome core complex	1.53E-02
24	GO:0009524: phragmoplast	2.16E-02
25	GO:0005802: trans-Golgi network	2.40E-02
26	GO:0019898: extrinsic component of membrane	2.41E-02
27	GO:0005788: endoplasmic reticulum lumen	3.42E-02
28	GO:0005774: vacuolar membrane	3.54E-02
29	GO:0048046: apoplast	3.87E-02
30	GO:0005777: peroxisome	4.98E-02