co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G60790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080056: petal vascular tissue pattern formation	0.00E+00
2	GO:0006858: extracellular transport	0.00E+00
3	GO:0039694: viral RNA genome replication	0.00E+00
4	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
5	GO:0007141: male meiosis I	0.00E+00
6	GO:0016540: protein autoprocessing	0.00E+00
7	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
8	GO:0019567: arabinose biosynthetic process	3.00E-05
9	GO:0019374: galactolipid metabolic process	7.58E-05
10	GO:0030010: establishment of cell polarity	7.58E-05
11	GO:2000034: regulation of seed maturation	1.32E-04
12	GO:0006421: asparaginyl-tRNA aminoacylation	1.32E-04
13	GO:0045227: capsule polysaccharide biosynthetic process	2.67E-04
14	GO:0033358: UDP-L-arabinose biosynthetic process	2.67E-04
15	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	2.67E-04
16	GO:0048232: male gamete generation	4.20E-04
17	GO:0006644: phospholipid metabolic process	6.76E-04
18	GO:0043068: positive regulation of programmed cell death	6.76E-04
19	GO:0009880: embryonic pattern specification	7.68E-04
20	GO:0051865: protein autoubiquitination	8.63E-04
21	GO:0042761: very long-chain fatty acid biosynthetic process	9.61E-04
22	GO:0006896: Golgi to vacuole transport	1.06E-03
23	GO:0051026: chiasma assembly	1.06E-03
24	GO:0045037: protein import into chloroplast stroma	1.27E-03
25	GO:0000266: mitochondrial fission	1.27E-03
26	GO:0010588: cotyledon vascular tissue pattern formation	1.38E-03
27	GO:0009225: nucleotide-sugar metabolic process	1.61E-03
28	GO:0010030: positive regulation of seed germination	1.61E-03
29	GO:0000027: ribosomal large subunit assembly	1.86E-03
30	GO:0061077: chaperone-mediated protein folding	2.11E-03
31	GO:0007131: reciprocal meiotic recombination	2.25E-03
32	GO:0080092: regulation of pollen tube growth	2.25E-03
33	GO:0006012: galactose metabolic process	2.38E-03
34	GO:0042254: ribosome biogenesis	2.51E-03
35	GO:0010501: RNA secondary structure unwinding	2.80E-03
36	GO:0010305: leaf vascular tissue pattern formation	2.94E-03
37	GO:0010183: pollen tube guidance	3.24E-03
38	GO:0045454: cell redox homeostasis	3.63E-03
39	GO:0006310: DNA recombination	3.87E-03
40	GO:0048364: root development	4.66E-03
41	GO:0006397: mRNA processing	4.66E-03
42	GO:0009832: plant-type cell wall biogenesis	5.41E-03
43	GO:0048527: lateral root development	5.78E-03
44	GO:0006839: mitochondrial transport	6.74E-03
45	GO:0006897: endocytosis	6.94E-03
46	GO:0051707: response to other organism	7.34E-03
47	GO:0000209: protein polyubiquitination	7.54E-03
48	GO:0016310: phosphorylation	8.28E-03
49	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8.38E-03
50	GO:0006260: DNA replication	8.38E-03
51	GO:0006364: rRNA processing	9.03E-03
52	GO:0009736: cytokinin-activated signaling pathway	9.03E-03
53	GO:0006417: regulation of translation	9.70E-03
54	GO:0048367: shoot system development	1.04E-02
55	GO:0009553: embryo sac development	1.13E-02
56	GO:0009790: embryo development	1.51E-02
57	GO:0009414: response to water deprivation	1.57E-02
58	GO:0006413: translational initiation	1.62E-02
59	GO:0040008: regulation of growth	1.65E-02
60	GO:0009451: RNA modification	1.73E-02
61	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.85E-02
62	GO:0006470: protein dephosphorylation	1.87E-02
63	GO:0009826: unidimensional cell growth	2.26E-02
64	GO:0009860: pollen tube growth	2.45E-02
65	GO:0048366: leaf development	2.61E-02
66	GO:0010200: response to chitin	2.78E-02
67	GO:0032259: methylation	3.47E-02
68	GO:0016042: lipid catabolic process	3.50E-02
69	GO:0006281: DNA repair	3.58E-02
70	GO:0008152: metabolic process	3.83E-02
71	GO:0009734: auxin-activated signaling pathway	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0000166: nucleotide binding	4.00E-07
2	GO:0004816: asparagine-tRNA ligase activity	1.32E-04
3	GO:0050373: UDP-arabinose 4-epimerase activity	2.67E-04
4	GO:0003978: UDP-glucose 4-epimerase activity	5.02E-04
5	GO:0004620: phospholipase activity	5.88E-04
6	GO:0047617: acyl-CoA hydrolase activity	9.61E-04
7	GO:0008026: ATP-dependent helicase activity	1.01E-03
8	GO:0008794: arsenate reductase (glutaredoxin) activity	1.16E-03
9	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.38E-03
10	GO:0005528: FK506 binding	1.86E-03
11	GO:0003723: RNA binding	2.34E-03
12	GO:0047134: protein-disulfide reductase activity	2.66E-03
13	GO:0004791: thioredoxin-disulfide reductase activity	3.09E-03
14	GO:0004197: cysteine-type endopeptidase activity	3.55E-03
15	GO:0008375: acetylglucosaminyltransferase activity	4.70E-03
16	GO:0004004: ATP-dependent RNA helicase activity	4.88E-03
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.17E-03
18	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	9.03E-03
19	GO:0008234: cysteine-type peptidase activity	9.70E-03
20	GO:0015035: protein disulfide oxidoreductase activity	1.18E-02
21	GO:0004386: helicase activity	1.23E-02
22	GO:0005525: GTP binding	1.30E-02
23	GO:0008565: protein transporter activity	1.54E-02
24	GO:0008017: microtubule binding	1.76E-02
25	GO:0008194: UDP-glycosyltransferase activity	1.85E-02
26	GO:0003743: translation initiation factor activity	1.90E-02
27	GO:0042802: identical protein binding	2.02E-02
28	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.02E-02
29	GO:0008168: methyltransferase activity	2.26E-02
30	GO:0000287: magnesium ion binding	2.29E-02
31	GO:0003729: mRNA binding	2.40E-02
32	GO:0061630: ubiquitin protein ligase activity	2.81E-02
33	GO:0016301: kinase activity	2.96E-02
34	GO:0004722: protein serine/threonine phosphatase activity	3.29E-02
35	GO:0003924: GTPase activity	3.58E-02
36	GO:0009055: electron carrier activity	3.76E-02
37	GO:0004519: endonuclease activity	3.80E-02
38	GO:0008289: lipid binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.81E-04
3	GO:0043234: protein complex	1.73E-03
4	GO:0030136: clathrin-coated vesicle	2.66E-03
5	GO:0000790: nuclear chromatin	2.66E-03
6	GO:0005794: Golgi apparatus	2.88E-03
7	GO:0005829: cytosol	3.68E-03
8	GO:0032580: Golgi cisterna membrane	3.87E-03
9	GO:0005743: mitochondrial inner membrane	4.16E-03
10	GO:0000932: P-body	4.36E-03
11	GO:0005730: nucleolus	5.17E-03
12	GO:0031902: late endosome membrane	6.94E-03
13	GO:0005834: heterotrimeric G-protein complex	1.06E-02
14	GO:0009706: chloroplast inner membrane	1.16E-02
15	GO:0005623: cell	1.38E-02
16	GO:0009524: phragmoplast	1.41E-02
17	GO:0000139: Golgi membrane	2.18E-02
18	GO:0016020: membrane	2.39E-02
19	GO:0005789: endoplasmic reticulum membrane	2.46E-02
20	GO:0005874: microtubule	2.64E-02
21	GO:0005886: plasma membrane	2.78E-02