GO Enrichment Analysis of Co-expressed Genes with
AT5G60640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 2 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 3 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 4 | GO:0033542: fatty acid beta-oxidation, unsaturated, even number | 0.00E+00 |
| 5 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 6 | GO:0043048: dolichyl monophosphate biosynthetic process | 0.00E+00 |
| 7 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 8 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 9 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 10 | GO:0000266: mitochondrial fission | 5.42E-06 |
| 11 | GO:0006090: pyruvate metabolic process | 2.06E-05 |
| 12 | GO:0009819: drought recovery | 7.70E-05 |
| 13 | GO:0042759: long-chain fatty acid biosynthetic process | 1.22E-04 |
| 14 | GO:0010941: regulation of cell death | 1.22E-04 |
| 15 | GO:0010150: leaf senescence | 1.99E-04 |
| 16 | GO:0006108: malate metabolic process | 2.65E-04 |
| 17 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.82E-04 |
| 18 | GO:0019441: tryptophan catabolic process to kynurenine | 2.82E-04 |
| 19 | GO:0050684: regulation of mRNA processing | 2.82E-04 |
| 20 | GO:0030010: establishment of cell polarity | 2.82E-04 |
| 21 | GO:0051258: protein polymerization | 2.82E-04 |
| 22 | GO:2000377: regulation of reactive oxygen species metabolic process | 4.18E-04 |
| 23 | GO:0032784: regulation of DNA-templated transcription, elongation | 4.65E-04 |
| 24 | GO:0010359: regulation of anion channel activity | 4.65E-04 |
| 25 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 4.65E-04 |
| 26 | GO:0048281: inflorescence morphogenesis | 4.65E-04 |
| 27 | GO:1900055: regulation of leaf senescence | 4.65E-04 |
| 28 | GO:0046513: ceramide biosynthetic process | 6.66E-04 |
| 29 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 6.66E-04 |
| 30 | GO:2000114: regulation of establishment of cell polarity | 6.66E-04 |
| 31 | GO:0072334: UDP-galactose transmembrane transport | 6.66E-04 |
| 32 | GO:0009399: nitrogen fixation | 6.66E-04 |
| 33 | GO:0072583: clathrin-dependent endocytosis | 6.66E-04 |
| 34 | GO:0006542: glutamine biosynthetic process | 8.84E-04 |
| 35 | GO:0033320: UDP-D-xylose biosynthetic process | 8.84E-04 |
| 36 | GO:0010483: pollen tube reception | 8.84E-04 |
| 37 | GO:0006468: protein phosphorylation | 9.62E-04 |
| 38 | GO:0046686: response to cadmium ion | 9.65E-04 |
| 39 | GO:0010225: response to UV-C | 1.12E-03 |
| 40 | GO:0030308: negative regulation of cell growth | 1.12E-03 |
| 41 | GO:1900425: negative regulation of defense response to bacterium | 1.37E-03 |
| 42 | GO:0002238: response to molecule of fungal origin | 1.37E-03 |
| 43 | GO:0006014: D-ribose metabolic process | 1.37E-03 |
| 44 | GO:0001731: formation of translation preinitiation complex | 1.37E-03 |
| 45 | GO:0042732: D-xylose metabolic process | 1.37E-03 |
| 46 | GO:1902456: regulation of stomatal opening | 1.37E-03 |
| 47 | GO:0008219: cell death | 1.84E-03 |
| 48 | GO:1902074: response to salt | 1.92E-03 |
| 49 | GO:0016559: peroxisome fission | 2.22E-03 |
| 50 | GO:1900150: regulation of defense response to fungus | 2.22E-03 |
| 51 | GO:0048766: root hair initiation | 2.22E-03 |
| 52 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.54E-03 |
| 53 | GO:0009880: embryonic pattern specification | 2.54E-03 |
| 54 | GO:0007338: single fertilization | 2.87E-03 |
| 55 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.87E-03 |
| 56 | GO:0009821: alkaloid biosynthetic process | 2.87E-03 |
| 57 | GO:0008202: steroid metabolic process | 3.21E-03 |
| 58 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.21E-03 |
| 59 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.47E-03 |
| 60 | GO:0043069: negative regulation of programmed cell death | 3.57E-03 |
| 61 | GO:0010629: negative regulation of gene expression | 3.57E-03 |
| 62 | GO:0030148: sphingolipid biosynthetic process | 3.94E-03 |
| 63 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 4.32E-03 |
| 64 | GO:0071365: cellular response to auxin stimulus | 4.32E-03 |
| 65 | GO:0006446: regulation of translational initiation | 5.12E-03 |
| 66 | GO:0070588: calcium ion transmembrane transport | 5.54E-03 |
| 67 | GO:0009225: nucleotide-sugar metabolic process | 5.54E-03 |
| 68 | GO:0009742: brassinosteroid mediated signaling pathway | 6.05E-03 |
| 69 | GO:0051260: protein homooligomerization | 7.34E-03 |
| 70 | GO:0061077: chaperone-mediated protein folding | 7.34E-03 |
| 71 | GO:0006633: fatty acid biosynthetic process | 8.97E-03 |
| 72 | GO:0042147: retrograde transport, endosome to Golgi | 9.31E-03 |
| 73 | GO:0048544: recognition of pollen | 1.09E-02 |
| 74 | GO:0019252: starch biosynthetic process | 1.15E-02 |
| 75 | GO:0008654: phospholipid biosynthetic process | 1.15E-02 |
| 76 | GO:0000302: response to reactive oxygen species | 1.20E-02 |
| 77 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.20E-02 |
| 78 | GO:0002229: defense response to oomycetes | 1.20E-02 |
| 79 | GO:0007264: small GTPase mediated signal transduction | 1.26E-02 |
| 80 | GO:0006914: autophagy | 1.38E-02 |
| 81 | GO:0009567: double fertilization forming a zygote and endosperm | 1.38E-02 |
| 82 | GO:0051607: defense response to virus | 1.50E-02 |
| 83 | GO:0009615: response to virus | 1.56E-02 |
| 84 | GO:0009607: response to biotic stimulus | 1.62E-02 |
| 85 | GO:0009816: defense response to bacterium, incompatible interaction | 1.62E-02 |
| 86 | GO:0006970: response to osmotic stress | 1.65E-02 |
| 87 | GO:0042128: nitrate assimilation | 1.69E-02 |
| 88 | GO:0016049: cell growth | 1.82E-02 |
| 89 | GO:0010311: lateral root formation | 1.95E-02 |
| 90 | GO:0010200: response to chitin | 1.97E-02 |
| 91 | GO:0006499: N-terminal protein myristoylation | 2.02E-02 |
| 92 | GO:0046777: protein autophosphorylation | 2.03E-02 |
| 93 | GO:0048527: lateral root development | 2.09E-02 |
| 94 | GO:0010119: regulation of stomatal movement | 2.09E-02 |
| 95 | GO:0016051: carbohydrate biosynthetic process | 2.23E-02 |
| 96 | GO:0006099: tricarboxylic acid cycle | 2.30E-02 |
| 97 | GO:0006897: endocytosis | 2.52E-02 |
| 98 | GO:0006631: fatty acid metabolic process | 2.52E-02 |
| 99 | GO:0016310: phosphorylation | 2.69E-02 |
| 100 | GO:0009751: response to salicylic acid | 2.77E-02 |
| 101 | GO:0006397: mRNA processing | 2.93E-02 |
| 102 | GO:0006952: defense response | 3.28E-02 |
| 103 | GO:0009736: cytokinin-activated signaling pathway | 3.30E-02 |
| 104 | GO:0009809: lignin biosynthetic process | 3.30E-02 |
| 105 | GO:0006486: protein glycosylation | 3.30E-02 |
| 106 | GO:0010224: response to UV-B | 3.38E-02 |
| 107 | GO:0050832: defense response to fungus | 3.56E-02 |
| 108 | GO:0006096: glycolytic process | 3.72E-02 |
| 109 | GO:0048367: shoot system development | 3.80E-02 |
| 110 | GO:0009620: response to fungus | 3.98E-02 |
| 111 | GO:0009553: embryo sac development | 4.15E-02 |
| 112 | GO:0009651: response to salt stress | 4.24E-02 |
| 113 | GO:0018105: peptidyl-serine phosphorylation | 4.33E-02 |
| 114 | GO:0006396: RNA processing | 4.33E-02 |
| 115 | GO:0009738: abscisic acid-activated signaling pathway | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 3 | GO:0004168: dolichol kinase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 6 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 1.25E-05 |
| 7 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 1.25E-05 |
| 8 | GO:0004470: malic enzyme activity | 1.25E-05 |
| 9 | GO:0016301: kinase activity | 3.35E-05 |
| 10 | GO:0071949: FAD binding | 1.20E-04 |
| 11 | GO:0019707: protein-cysteine S-acyltransferase activity | 1.22E-04 |
| 12 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.22E-04 |
| 13 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.22E-04 |
| 14 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.22E-04 |
| 15 | GO:0004713: protein tyrosine kinase activity | 1.71E-04 |
| 16 | GO:0005524: ATP binding | 2.81E-04 |
| 17 | GO:0045140: inositol phosphoceramide synthase activity | 2.82E-04 |
| 18 | GO:0004061: arylformamidase activity | 2.82E-04 |
| 19 | GO:0050291: sphingosine N-acyltransferase activity | 2.82E-04 |
| 20 | GO:0032934: sterol binding | 2.82E-04 |
| 21 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.65E-04 |
| 22 | GO:0016805: dipeptidase activity | 4.65E-04 |
| 23 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 4.65E-04 |
| 24 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.84E-04 |
| 25 | GO:0070628: proteasome binding | 8.84E-04 |
| 26 | GO:0004674: protein serine/threonine kinase activity | 9.63E-04 |
| 27 | GO:0005496: steroid binding | 1.12E-03 |
| 28 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.12E-03 |
| 29 | GO:0004356: glutamate-ammonia ligase activity | 1.12E-03 |
| 30 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.12E-03 |
| 31 | GO:0008948: oxaloacetate decarboxylase activity | 1.12E-03 |
| 32 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.37E-03 |
| 33 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.37E-03 |
| 34 | GO:0031593: polyubiquitin binding | 1.37E-03 |
| 35 | GO:0070403: NAD+ binding | 1.64E-03 |
| 36 | GO:0102391: decanoate--CoA ligase activity | 1.64E-03 |
| 37 | GO:0004747: ribokinase activity | 1.64E-03 |
| 38 | GO:0008143: poly(A) binding | 1.92E-03 |
| 39 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.92E-03 |
| 40 | GO:0008235: metalloexopeptidase activity | 1.92E-03 |
| 41 | GO:0005515: protein binding | 2.08E-03 |
| 42 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.22E-03 |
| 43 | GO:0008865: fructokinase activity | 2.22E-03 |
| 44 | GO:0008142: oxysterol binding | 2.54E-03 |
| 45 | GO:0030955: potassium ion binding | 3.21E-03 |
| 46 | GO:0016844: strictosidine synthase activity | 3.21E-03 |
| 47 | GO:0004743: pyruvate kinase activity | 3.21E-03 |
| 48 | GO:0004497: monooxygenase activity | 3.32E-03 |
| 49 | GO:0008171: O-methyltransferase activity | 3.57E-03 |
| 50 | GO:0051287: NAD binding | 3.61E-03 |
| 51 | GO:0004177: aminopeptidase activity | 3.94E-03 |
| 52 | GO:0004521: endoribonuclease activity | 4.32E-03 |
| 53 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.71E-03 |
| 54 | GO:0005388: calcium-transporting ATPase activity | 4.71E-03 |
| 55 | GO:0005525: GTP binding | 5.11E-03 |
| 56 | GO:0003924: GTPase activity | 5.44E-03 |
| 57 | GO:0004725: protein tyrosine phosphatase activity | 5.98E-03 |
| 58 | GO:0003954: NADH dehydrogenase activity | 6.42E-03 |
| 59 | GO:0043130: ubiquitin binding | 6.42E-03 |
| 60 | GO:0005528: FK506 binding | 6.42E-03 |
| 61 | GO:0043424: protein histidine kinase binding | 6.87E-03 |
| 62 | GO:0033612: receptor serine/threonine kinase binding | 7.34E-03 |
| 63 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 7.34E-03 |
| 64 | GO:0003727: single-stranded RNA binding | 8.80E-03 |
| 65 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 9.19E-03 |
| 66 | GO:0008017: microtubule binding | 1.03E-02 |
| 67 | GO:0030276: clathrin binding | 1.04E-02 |
| 68 | GO:0010181: FMN binding | 1.09E-02 |
| 69 | GO:0008483: transaminase activity | 1.44E-02 |
| 70 | GO:0051213: dioxygenase activity | 1.56E-02 |
| 71 | GO:0030246: carbohydrate binding | 1.64E-02 |
| 72 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.69E-02 |
| 73 | GO:0004683: calmodulin-dependent protein kinase activity | 1.75E-02 |
| 74 | GO:0005516: calmodulin binding | 1.89E-02 |
| 75 | GO:0050897: cobalt ion binding | 2.09E-02 |
| 76 | GO:0030145: manganese ion binding | 2.09E-02 |
| 77 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.23E-02 |
| 78 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.37E-02 |
| 79 | GO:0042803: protein homodimerization activity | 2.38E-02 |
| 80 | GO:0004364: glutathione transferase activity | 2.59E-02 |
| 81 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.98E-02 |
| 82 | GO:0016746: transferase activity, transferring acyl groups | 4.33E-02 |
| 83 | GO:0004672: protein kinase activity | 4.41E-02 |
| 84 | GO:0003729: mRNA binding | 4.48E-02 |
| 85 | GO:0004386: helicase activity | 4.51E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008305: integrin complex | 0.00E+00 |
| 2 | GO:0005886: plasma membrane | 3.89E-08 |
| 3 | GO:0005783: endoplasmic reticulum | 1.94E-06 |
| 4 | GO:0005829: cytosol | 3.49E-06 |
| 5 | GO:0005794: Golgi apparatus | 1.09E-05 |
| 6 | GO:0005773: vacuole | 9.16E-05 |
| 7 | GO:0000138: Golgi trans cisterna | 1.22E-04 |
| 8 | GO:0045334: clathrin-coated endocytic vesicle | 1.22E-04 |
| 9 | GO:0045252: oxoglutarate dehydrogenase complex | 1.22E-04 |
| 10 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.82E-04 |
| 11 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.37E-04 |
| 12 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 4.65E-04 |
| 13 | GO:0016282: eukaryotic 43S preinitiation complex | 1.37E-03 |
| 14 | GO:0033290: eukaryotic 48S preinitiation complex | 1.64E-03 |
| 15 | GO:0030173: integral component of Golgi membrane | 1.64E-03 |
| 16 | GO:0030131: clathrin adaptor complex | 2.22E-03 |
| 17 | GO:0010494: cytoplasmic stress granule | 2.87E-03 |
| 18 | GO:0030125: clathrin vesicle coat | 3.57E-03 |
| 19 | GO:0005774: vacuolar membrane | 4.66E-03 |
| 20 | GO:0010008: endosome membrane | 4.90E-03 |
| 21 | GO:0043234: protein complex | 5.98E-03 |
| 22 | GO:0005769: early endosome | 5.98E-03 |
| 23 | GO:0005741: mitochondrial outer membrane | 7.34E-03 |
| 24 | GO:0005905: clathrin-coated pit | 7.34E-03 |
| 25 | GO:0005839: proteasome core complex | 7.34E-03 |
| 26 | GO:0009504: cell plate | 1.15E-02 |
| 27 | GO:0005777: peroxisome | 1.34E-02 |
| 28 | GO:0016020: membrane | 1.35E-02 |
| 29 | GO:0005778: peroxisomal membrane | 1.44E-02 |
| 30 | GO:0016021: integral component of membrane | 1.50E-02 |
| 31 | GO:0030529: intracellular ribonucleoprotein complex | 1.56E-02 |
| 32 | GO:0005874: microtubule | 1.83E-02 |
| 33 | GO:0009506: plasmodesma | 2.48E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 4.63E-02 |