GO Enrichment Analysis of Co-expressed Genes with
AT5G59880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 2 | GO:0006793: phosphorus metabolic process | 0.00E+00 |
| 3 | GO:0072722: response to amitrole | 0.00E+00 |
| 4 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 5 | GO:0002376: immune system process | 0.00E+00 |
| 6 | GO:0046686: response to cadmium ion | 2.99E-06 |
| 7 | GO:0009617: response to bacterium | 4.21E-06 |
| 8 | GO:0045454: cell redox homeostasis | 2.66E-05 |
| 9 | GO:0030163: protein catabolic process | 1.31E-04 |
| 10 | GO:0044376: RNA polymerase II complex import to nucleus | 1.56E-04 |
| 11 | GO:1990641: response to iron ion starvation | 1.56E-04 |
| 12 | GO:0080173: male-female gamete recognition during double fertilization | 1.56E-04 |
| 13 | GO:1990022: RNA polymerase III complex localization to nucleus | 1.56E-04 |
| 14 | GO:0033306: phytol metabolic process | 1.56E-04 |
| 15 | GO:0010482: regulation of epidermal cell division | 1.56E-04 |
| 16 | GO:0006098: pentose-phosphate shunt | 1.73E-04 |
| 17 | GO:0006032: chitin catabolic process | 2.46E-04 |
| 18 | GO:0000272: polysaccharide catabolic process | 2.86E-04 |
| 19 | GO:0006101: citrate metabolic process | 3.55E-04 |
| 20 | GO:0019752: carboxylic acid metabolic process | 3.55E-04 |
| 21 | GO:1902000: homogentisate catabolic process | 3.55E-04 |
| 22 | GO:0051592: response to calcium ion | 3.55E-04 |
| 23 | GO:0031648: protein destabilization | 3.55E-04 |
| 24 | GO:0071395: cellular response to jasmonic acid stimulus | 3.55E-04 |
| 25 | GO:0090057: root radial pattern formation | 3.55E-04 |
| 26 | GO:0019521: D-gluconate metabolic process | 3.55E-04 |
| 27 | GO:0034976: response to endoplasmic reticulum stress | 5.28E-04 |
| 28 | GO:0034051: negative regulation of plant-type hypersensitive response | 5.82E-04 |
| 29 | GO:0010351: lithium ion transport | 5.82E-04 |
| 30 | GO:0010272: response to silver ion | 5.82E-04 |
| 31 | GO:0009072: aromatic amino acid family metabolic process | 5.82E-04 |
| 32 | GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway | 5.82E-04 |
| 33 | GO:0016998: cell wall macromolecule catabolic process | 7.05E-04 |
| 34 | GO:0006882: cellular zinc ion homeostasis | 8.33E-04 |
| 35 | GO:0001676: long-chain fatty acid metabolic process | 8.33E-04 |
| 36 | GO:0048194: Golgi vesicle budding | 8.33E-04 |
| 37 | GO:0009651: response to salt stress | 8.99E-04 |
| 38 | GO:0080142: regulation of salicylic acid biosynthetic process | 1.10E-03 |
| 39 | GO:0006621: protein retention in ER lumen | 1.10E-03 |
| 40 | GO:0051567: histone H3-K9 methylation | 1.10E-03 |
| 41 | GO:0006097: glyoxylate cycle | 1.40E-03 |
| 42 | GO:0009697: salicylic acid biosynthetic process | 1.40E-03 |
| 43 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.56E-03 |
| 44 | GO:0035435: phosphate ion transmembrane transport | 1.72E-03 |
| 45 | GO:0002238: response to molecule of fungal origin | 1.72E-03 |
| 46 | GO:0010405: arabinogalactan protein metabolic process | 1.72E-03 |
| 47 | GO:0043248: proteasome assembly | 1.72E-03 |
| 48 | GO:0060918: auxin transport | 1.72E-03 |
| 49 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.72E-03 |
| 50 | GO:0010555: response to mannitol | 2.06E-03 |
| 51 | GO:2000067: regulation of root morphogenesis | 2.06E-03 |
| 52 | GO:0071470: cellular response to osmotic stress | 2.06E-03 |
| 53 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.06E-03 |
| 54 | GO:0006468: protein phosphorylation | 2.40E-03 |
| 55 | GO:0030026: cellular manganese ion homeostasis | 2.42E-03 |
| 56 | GO:0071446: cellular response to salicylic acid stimulus | 2.42E-03 |
| 57 | GO:1900056: negative regulation of leaf senescence | 2.42E-03 |
| 58 | GO:0043068: positive regulation of programmed cell death | 2.80E-03 |
| 59 | GO:0006605: protein targeting | 2.80E-03 |
| 60 | GO:0050821: protein stabilization | 2.80E-03 |
| 61 | GO:0006102: isocitrate metabolic process | 2.80E-03 |
| 62 | GO:0010928: regulation of auxin mediated signaling pathway | 2.80E-03 |
| 63 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.80E-03 |
| 64 | GO:0010262: somatic embryogenesis | 3.21E-03 |
| 65 | GO:0030968: endoplasmic reticulum unfolded protein response | 3.21E-03 |
| 66 | GO:0009699: phenylpropanoid biosynthetic process | 3.21E-03 |
| 67 | GO:0007186: G-protein coupled receptor signaling pathway | 3.21E-03 |
| 68 | GO:0006099: tricarboxylic acid cycle | 3.42E-03 |
| 69 | GO:0055114: oxidation-reduction process | 3.43E-03 |
| 70 | GO:0009737: response to abscisic acid | 3.58E-03 |
| 71 | GO:0010112: regulation of systemic acquired resistance | 3.63E-03 |
| 72 | GO:0009056: catabolic process | 3.63E-03 |
| 73 | GO:0046685: response to arsenic-containing substance | 3.63E-03 |
| 74 | GO:0019432: triglyceride biosynthetic process | 3.63E-03 |
| 75 | GO:0051865: protein autoubiquitination | 3.63E-03 |
| 76 | GO:0006631: fatty acid metabolic process | 3.88E-03 |
| 77 | GO:0010205: photoinhibition | 4.06E-03 |
| 78 | GO:0043067: regulation of programmed cell death | 4.06E-03 |
| 79 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.06E-03 |
| 80 | GO:0055062: phosphate ion homeostasis | 4.52E-03 |
| 81 | GO:0007064: mitotic sister chromatid cohesion | 4.52E-03 |
| 82 | GO:0015031: protein transport | 4.78E-03 |
| 83 | GO:0009750: response to fructose | 4.99E-03 |
| 84 | GO:0048765: root hair cell differentiation | 4.99E-03 |
| 85 | GO:0009846: pollen germination | 5.28E-03 |
| 86 | GO:0015706: nitrate transport | 5.48E-03 |
| 87 | GO:0012501: programmed cell death | 5.48E-03 |
| 88 | GO:0016192: vesicle-mediated transport | 5.50E-03 |
| 89 | GO:0006486: protein glycosylation | 5.66E-03 |
| 90 | GO:0006807: nitrogen compound metabolic process | 5.98E-03 |
| 91 | GO:0006626: protein targeting to mitochondrion | 5.98E-03 |
| 92 | GO:2000028: regulation of photoperiodism, flowering | 5.98E-03 |
| 93 | GO:0006094: gluconeogenesis | 5.98E-03 |
| 94 | GO:0002237: response to molecule of bacterial origin | 6.50E-03 |
| 95 | GO:0006096: glycolytic process | 6.69E-03 |
| 96 | GO:0046688: response to copper ion | 7.04E-03 |
| 97 | GO:0010053: root epidermal cell differentiation | 7.04E-03 |
| 98 | GO:0010167: response to nitrate | 7.04E-03 |
| 99 | GO:0000027: ribosomal large subunit assembly | 8.16E-03 |
| 100 | GO:0009863: salicylic acid mediated signaling pathway | 8.16E-03 |
| 101 | GO:0009695: jasmonic acid biosynthetic process | 8.74E-03 |
| 102 | GO:0006825: copper ion transport | 8.74E-03 |
| 103 | GO:0006874: cellular calcium ion homeostasis | 8.74E-03 |
| 104 | GO:0010026: trichome differentiation | 8.74E-03 |
| 105 | GO:0031408: oxylipin biosynthetic process | 9.34E-03 |
| 106 | GO:0031348: negative regulation of defense response | 9.96E-03 |
| 107 | GO:0071456: cellular response to hypoxia | 9.96E-03 |
| 108 | GO:0006012: galactose metabolic process | 1.06E-02 |
| 109 | GO:0019722: calcium-mediated signaling | 1.12E-02 |
| 110 | GO:0010091: trichome branching | 1.12E-02 |
| 111 | GO:0009790: embryo development | 1.18E-02 |
| 112 | GO:0042742: defense response to bacterium | 1.19E-02 |
| 113 | GO:0042391: regulation of membrane potential | 1.25E-02 |
| 114 | GO:0009734: auxin-activated signaling pathway | 1.31E-02 |
| 115 | GO:0006520: cellular amino acid metabolic process | 1.32E-02 |
| 116 | GO:0009958: positive gravitropism | 1.32E-02 |
| 117 | GO:0040008: regulation of growth | 1.33E-02 |
| 118 | GO:0006814: sodium ion transport | 1.39E-02 |
| 119 | GO:0009749: response to glucose | 1.46E-02 |
| 120 | GO:0010193: response to ozone | 1.54E-02 |
| 121 | GO:0000302: response to reactive oxygen species | 1.54E-02 |
| 122 | GO:0007264: small GTPase mediated signal transduction | 1.61E-02 |
| 123 | GO:0006464: cellular protein modification process | 1.76E-02 |
| 124 | GO:0009611: response to wounding | 1.80E-02 |
| 125 | GO:0016579: protein deubiquitination | 1.92E-02 |
| 126 | GO:0009615: response to virus | 1.99E-02 |
| 127 | GO:0009816: defense response to bacterium, incompatible interaction | 2.07E-02 |
| 128 | GO:0009627: systemic acquired resistance | 2.16E-02 |
| 129 | GO:0042128: nitrate assimilation | 2.16E-02 |
| 130 | GO:0006508: proteolysis | 2.19E-02 |
| 131 | GO:0016049: cell growth | 2.32E-02 |
| 132 | GO:0006457: protein folding | 2.42E-02 |
| 133 | GO:0009407: toxin catabolic process | 2.58E-02 |
| 134 | GO:0010043: response to zinc ion | 2.67E-02 |
| 135 | GO:0010200: response to chitin | 2.78E-02 |
| 136 | GO:0009867: jasmonic acid mediated signaling pathway | 2.85E-02 |
| 137 | GO:0042542: response to hydrogen peroxide | 3.32E-02 |
| 138 | GO:0009744: response to sucrose | 3.42E-02 |
| 139 | GO:0009644: response to high light intensity | 3.61E-02 |
| 140 | GO:0009636: response to toxic substance | 3.71E-02 |
| 141 | GO:0006629: lipid metabolic process | 3.96E-02 |
| 142 | GO:0006812: cation transport | 4.01E-02 |
| 143 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.33E-02 |
| 144 | GO:0008152: metabolic process | 4.36E-02 |
| 145 | GO:0009909: regulation of flower development | 4.54E-02 |
| 146 | GO:0048316: seed development | 4.86E-02 |
| 147 | GO:0009626: plant-type hypersensitive response | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005046: KDEL sequence binding | 0.00E+00 |
| 2 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 3 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 4 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 5 | GO:0051670: inulinase activity | 0.00E+00 |
| 6 | GO:0102391: decanoate--CoA ligase activity | 6.56E-05 |
| 7 | GO:0004467: long-chain fatty acid-CoA ligase activity | 8.77E-05 |
| 8 | GO:0016831: carboxy-lyase activity | 8.77E-05 |
| 9 | GO:0004321: fatty-acyl-CoA synthase activity | 1.56E-04 |
| 10 | GO:0031219: levanase activity | 1.56E-04 |
| 11 | GO:0051669: fructan beta-fructosidase activity | 1.56E-04 |
| 12 | GO:0004568: chitinase activity | 2.46E-04 |
| 13 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.86E-04 |
| 14 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.55E-04 |
| 15 | GO:0015036: disulfide oxidoreductase activity | 3.55E-04 |
| 16 | GO:0004634: phosphopyruvate hydratase activity | 3.55E-04 |
| 17 | GO:0010296: prenylcysteine methylesterase activity | 3.55E-04 |
| 18 | GO:0003994: aconitate hydratase activity | 3.55E-04 |
| 19 | GO:0050736: O-malonyltransferase activity | 3.55E-04 |
| 20 | GO:0005516: calmodulin binding | 4.44E-04 |
| 21 | GO:0008061: chitin binding | 4.74E-04 |
| 22 | GO:0004190: aspartic-type endopeptidase activity | 4.74E-04 |
| 23 | GO:0016805: dipeptidase activity | 5.82E-04 |
| 24 | GO:0001664: G-protein coupled receptor binding | 5.82E-04 |
| 25 | GO:0005093: Rab GDP-dissociation inhibitor activity | 5.82E-04 |
| 26 | GO:0008430: selenium binding | 5.82E-04 |
| 27 | GO:0016531: copper chaperone activity | 5.82E-04 |
| 28 | GO:0031683: G-protein beta/gamma-subunit complex binding | 5.82E-04 |
| 29 | GO:0005509: calcium ion binding | 6.87E-04 |
| 30 | GO:0004298: threonine-type endopeptidase activity | 7.05E-04 |
| 31 | GO:0004674: protein serine/threonine kinase activity | 7.53E-04 |
| 32 | GO:0004108: citrate (Si)-synthase activity | 8.33E-04 |
| 33 | GO:0003756: protein disulfide isomerase activity | 9.07E-04 |
| 34 | GO:0015368: calcium:cation antiporter activity | 1.10E-03 |
| 35 | GO:0004737: pyruvate decarboxylase activity | 1.10E-03 |
| 36 | GO:0015369: calcium:proton antiporter activity | 1.10E-03 |
| 37 | GO:0046923: ER retention sequence binding | 1.10E-03 |
| 38 | GO:0015035: protein disulfide oxidoreductase activity | 1.18E-03 |
| 39 | GO:0004040: amidase activity | 1.40E-03 |
| 40 | GO:0005496: steroid binding | 1.40E-03 |
| 41 | GO:0031386: protein tag | 1.40E-03 |
| 42 | GO:0005524: ATP binding | 1.41E-03 |
| 43 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.72E-03 |
| 44 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.72E-03 |
| 45 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.72E-03 |
| 46 | GO:0030976: thiamine pyrophosphate binding | 1.72E-03 |
| 47 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.72E-03 |
| 48 | GO:0004332: fructose-bisphosphate aldolase activity | 1.72E-03 |
| 49 | GO:0047714: galactolipase activity | 1.72E-03 |
| 50 | GO:0008237: metallopeptidase activity | 1.78E-03 |
| 51 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.06E-03 |
| 52 | GO:0003978: UDP-glucose 4-epimerase activity | 2.06E-03 |
| 53 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.06E-03 |
| 54 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.06E-03 |
| 55 | GO:0004012: phospholipid-translocating ATPase activity | 2.06E-03 |
| 56 | GO:0004683: calmodulin-dependent protein kinase activity | 2.34E-03 |
| 57 | GO:0008320: protein transmembrane transporter activity | 2.42E-03 |
| 58 | GO:0008235: metalloexopeptidase activity | 2.42E-03 |
| 59 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 2.42E-03 |
| 60 | GO:0015491: cation:cation antiporter activity | 2.80E-03 |
| 61 | GO:0008135: translation factor activity, RNA binding | 3.21E-03 |
| 62 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 3.21E-03 |
| 63 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.57E-03 |
| 64 | GO:0016207: 4-coumarate-CoA ligase activity | 3.63E-03 |
| 65 | GO:0000287: magnesium ion binding | 3.83E-03 |
| 66 | GO:0015112: nitrate transmembrane transporter activity | 4.06E-03 |
| 67 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.06E-03 |
| 68 | GO:0004713: protein tyrosine kinase activity | 4.52E-03 |
| 69 | GO:0005198: structural molecule activity | 4.73E-03 |
| 70 | GO:0004177: aminopeptidase activity | 4.99E-03 |
| 71 | GO:0008233: peptidase activity | 5.04E-03 |
| 72 | GO:0008378: galactosyltransferase activity | 5.48E-03 |
| 73 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.98E-03 |
| 74 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.98E-03 |
| 75 | GO:0030246: carbohydrate binding | 6.40E-03 |
| 76 | GO:0030552: cAMP binding | 7.04E-03 |
| 77 | GO:0030553: cGMP binding | 7.04E-03 |
| 78 | GO:0016301: kinase activity | 7.21E-03 |
| 79 | GO:0031418: L-ascorbic acid binding | 8.16E-03 |
| 80 | GO:0005216: ion channel activity | 8.74E-03 |
| 81 | GO:0009055: electron carrier activity | 9.25E-03 |
| 82 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 9.34E-03 |
| 83 | GO:0016758: transferase activity, transferring hexosyl groups | 9.83E-03 |
| 84 | GO:0030170: pyridoxal phosphate binding | 1.12E-02 |
| 85 | GO:0005249: voltage-gated potassium channel activity | 1.25E-02 |
| 86 | GO:0030551: cyclic nucleotide binding | 1.25E-02 |
| 87 | GO:0004872: receptor activity | 1.46E-02 |
| 88 | GO:0016887: ATPase activity | 1.48E-02 |
| 89 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.54E-02 |
| 90 | GO:0008194: UDP-glycosyltransferase activity | 1.56E-02 |
| 91 | GO:0004672: protein kinase activity | 2.11E-02 |
| 92 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.16E-02 |
| 93 | GO:0004806: triglyceride lipase activity | 2.24E-02 |
| 94 | GO:0016740: transferase activity | 2.25E-02 |
| 95 | GO:0005096: GTPase activator activity | 2.50E-02 |
| 96 | GO:0004222: metalloendopeptidase activity | 2.58E-02 |
| 97 | GO:0016757: transferase activity, transferring glycosyl groups | 2.61E-02 |
| 98 | GO:0030145: manganese ion binding | 2.67E-02 |
| 99 | GO:0005507: copper ion binding | 2.73E-02 |
| 100 | GO:0003746: translation elongation factor activity | 2.85E-02 |
| 101 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.85E-02 |
| 102 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.13E-02 |
| 103 | GO:0004364: glutathione transferase activity | 3.32E-02 |
| 104 | GO:0004871: signal transducer activity | 3.37E-02 |
| 105 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.61E-02 |
| 106 | GO:0016787: hydrolase activity | 3.68E-02 |
| 107 | GO:0003924: GTPase activity | 3.96E-02 |
| 108 | GO:0016298: lipase activity | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 3 | GO:0005783: endoplasmic reticulum | 2.31E-06 |
| 4 | GO:0005789: endoplasmic reticulum membrane | 2.04E-05 |
| 5 | GO:0005801: cis-Golgi network | 6.56E-05 |
| 6 | GO:0005886: plasma membrane | 6.75E-05 |
| 7 | GO:0000502: proteasome complex | 7.41E-05 |
| 8 | GO:0005829: cytosol | 1.25E-04 |
| 9 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.86E-04 |
| 10 | GO:0000015: phosphopyruvate hydratase complex | 3.55E-04 |
| 11 | GO:0031314: extrinsic component of mitochondrial inner membrane | 3.55E-04 |
| 12 | GO:0030134: ER to Golgi transport vesicle | 3.55E-04 |
| 13 | GO:0005737: cytoplasm | 4.19E-04 |
| 14 | GO:0005839: proteasome core complex | 7.05E-04 |
| 15 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 1.10E-03 |
| 16 | GO:0030660: Golgi-associated vesicle membrane | 1.10E-03 |
| 17 | GO:0005794: Golgi apparatus | 1.48E-03 |
| 18 | GO:0005623: cell | 1.55E-03 |
| 19 | GO:0005788: endoplasmic reticulum lumen | 2.11E-03 |
| 20 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.80E-03 |
| 21 | GO:0000326: protein storage vacuole | 3.21E-03 |
| 22 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.21E-03 |
| 23 | GO:0005740: mitochondrial envelope | 4.52E-03 |
| 24 | GO:0005765: lysosomal membrane | 4.99E-03 |
| 25 | GO:0005777: peroxisome | 5.03E-03 |
| 26 | GO:0031012: extracellular matrix | 5.98E-03 |
| 27 | GO:0005750: mitochondrial respiratory chain complex III | 6.50E-03 |
| 28 | GO:0016021: integral component of membrane | 7.03E-03 |
| 29 | GO:0005758: mitochondrial intermembrane space | 8.16E-03 |
| 30 | GO:0005774: vacuolar membrane | 9.24E-03 |
| 31 | GO:0005741: mitochondrial outer membrane | 9.34E-03 |
| 32 | GO:0010287: plastoglobule | 9.57E-03 |
| 33 | GO:0048046: apoplast | 1.02E-02 |
| 34 | GO:0032580: Golgi cisterna membrane | 1.76E-02 |
| 35 | GO:0005773: vacuole | 2.10E-02 |
| 36 | GO:0005819: spindle | 3.04E-02 |
| 37 | GO:0005618: cell wall | 3.36E-02 |
| 38 | GO:0005635: nuclear envelope | 4.43E-02 |
| 39 | GO:0005834: heterotrimeric G-protein complex | 4.97E-02 |