Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G59870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006226: dUMP biosynthetic process0.00E+00
2GO:0051290: protein heterotetramerization0.00E+00
3GO:0046080: dUTP metabolic process0.00E+00
4GO:1901671: positive regulation of superoxide dismutase activity0.00E+00
5GO:0016048: detection of temperature stimulus0.00E+00
6GO:0009202: deoxyribonucleoside triphosphate biosynthetic process0.00E+00
7GO:0009394: 2'-deoxyribonucleotide metabolic process0.00E+00
8GO:0006270: DNA replication initiation4.24E-08
9GO:0006260: DNA replication4.63E-08
10GO:0006281: DNA repair9.68E-08
11GO:0045717: negative regulation of fatty acid biosynthetic process3.21E-05
12GO:0071158: positive regulation of cell cycle arrest3.21E-05
13GO:0006269: DNA replication, synthesis of RNA primer3.21E-05
14GO:0000727: double-strand break repair via break-induced replication5.78E-05
15GO:0006275: regulation of DNA replication5.78E-05
16GO:0035066: positive regulation of histone acetylation5.78E-05
17GO:0006310: DNA recombination5.84E-05
18GO:0006986: response to unfolded protein8.79E-05
19GO:0051085: chaperone mediated protein folding requiring cofactor8.79E-05
20GO:0035067: negative regulation of histone acetylation8.79E-05
21GO:0046686: response to cadmium ion1.31E-04
22GO:0016458: gene silencing1.98E-04
23GO:0006268: DNA unwinding involved in DNA replication2.39E-04
24GO:0009082: branched-chain amino acid biosynthetic process2.39E-04
25GO:0000105: histidine biosynthetic process3.27E-04
26GO:0009097: isoleucine biosynthetic process3.73E-04
27GO:0044030: regulation of DNA methylation3.73E-04
28GO:0009934: regulation of meristem structural organization7.31E-04
29GO:0019253: reductive pentose-phosphate cycle7.31E-04
30GO:0006334: nucleosome assembly1.02E-03
31GO:0006284: base-excision repair1.21E-03
32GO:0042127: regulation of cell proliferation1.21E-03
33GO:0010182: sugar mediated signaling pathway1.40E-03
34GO:0006342: chromatin silencing1.40E-03
35GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.14E-03
36GO:0008283: cell proliferation3.43E-03
37GO:0009636: response to toxic substance3.71E-03
38GO:0006096: glycolytic process4.70E-03
39GO:0051726: regulation of cell cycle5.56E-03
40GO:0010468: regulation of gene expression8.82E-03
41GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.00E-02
42GO:0006970: response to osmotic stress1.11E-02
43GO:0007049: cell cycle1.14E-02
44GO:0048366: leaf development1.19E-02
45GO:0045892: negative regulation of transcription, DNA-templated1.41E-02
46GO:0009908: flower development2.27E-02
47GO:0006414: translational elongation3.25E-02
48GO:0009414: response to water deprivation3.97E-02
49GO:0042742: defense response to bacterium4.04E-02
RankGO TermAdjusted P value
1GO:0004636: phosphoribosyl-ATP diphosphatase activity0.00E+00
2GO:0004635: phosphoribosyl-AMP cyclohydrolase activity0.00E+00
3GO:0004170: dUTP diphosphatase activity0.00E+00
4GO:0003677: DNA binding3.74E-08
5GO:0046982: protein heterodimerization activity1.16E-06
6GO:0030337: DNA polymerase processivity factor activity1.21E-05
7GO:0019239: deaminase activity1.21E-05
8GO:0003887: DNA-directed DNA polymerase activity1.36E-05
9GO:0003896: DNA primase activity3.21E-05
10GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor3.21E-05
11GO:0004618: phosphoglycerate kinase activity3.21E-05
12GO:0008725: DNA-3-methyladenine glycosylase activity1.59E-04
13GO:0043138: 3'-5' DNA helicase activity2.39E-04
14GO:0003678: DNA helicase activity4.21E-04
15GO:0004521: endoribonuclease activity6.23E-04
16GO:0051087: chaperone binding9.61E-04
17GO:0008094: DNA-dependent ATPase activity1.02E-03
18GO:0003713: transcription coactivator activity1.40E-03
19GO:0003697: single-stranded DNA binding2.89E-03
20GO:0005515: protein binding3.07E-03
21GO:0042393: histone binding3.15E-03
22GO:0051539: 4 iron, 4 sulfur cluster binding3.15E-03
23GO:0051082: unfolded protein binding5.34E-03
24GO:0004386: helicase activity5.67E-03
25GO:0005524: ATP binding5.70E-03
26GO:0042802: identical protein binding9.21E-03
27GO:0000287: magnesium ion binding1.04E-02
28GO:0005507: copper ion binding3.14E-02
29GO:0005516: calmodulin binding3.27E-02
RankGO TermAdjusted P value
1GO:0000788: nuclear nucleosome0.00E+00
2GO:0000786: nucleosome1.49E-08
3GO:0005658: alpha DNA polymerase:primase complex5.28E-08
4GO:0031436: BRCA1-BARD1 complex1.21E-05
5GO:0005971: ribonucleoside-diphosphate reductase complex1.21E-05
6GO:0000790: nuclear chromatin3.02E-05
7GO:0000811: GINS complex5.78E-05
8GO:0070531: BRCA1-A complex5.78E-05
9GO:0042555: MCM complex1.22E-04
10GO:0031298: replication fork protection complex1.22E-04
11GO:0005634: nucleus1.41E-04
12GO:0000347: THO complex2.82E-04
13GO:0009579: thylakoid3.31E-04
14GO:0009536: plastid8.31E-04
15GO:0005730: nucleolus1.23E-03
16GO:0009570: chloroplast stroma1.25E-03
17GO:0009941: chloroplast envelope4.45E-03
18GO:0005759: mitochondrial matrix7.30E-03
19GO:0022626: cytosolic ribosome2.37E-02
20GO:0005622: intracellular3.68E-02
21GO:0005840: ribosome4.18E-02
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Gene type



Gene DE type