Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58375

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080052: response to histidine0.00E+00
2GO:0006793: phosphorus metabolic process0.00E+00
3GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
4GO:0036503: ERAD pathway0.00E+00
5GO:0006182: cGMP biosynthetic process0.00E+00
6GO:0072722: response to amitrole0.00E+00
7GO:0006592: ornithine biosynthetic process0.00E+00
8GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
9GO:0010055: atrichoblast differentiation0.00E+00
10GO:0043201: response to leucine0.00E+00
11GO:0042430: indole-containing compound metabolic process0.00E+00
12GO:0080053: response to phenylalanine0.00E+00
13GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
14GO:0030149: sphingolipid catabolic process0.00E+00
15GO:0009617: response to bacterium1.21E-08
16GO:0042742: defense response to bacterium1.16E-07
17GO:0006468: protein phosphorylation2.01E-07
18GO:0010200: response to chitin1.45E-05
19GO:0071456: cellular response to hypoxia1.92E-05
20GO:0010120: camalexin biosynthetic process2.41E-05
21GO:0009816: defense response to bacterium, incompatible interaction1.46E-04
22GO:0070588: calcium ion transmembrane transport1.54E-04
23GO:0002238: response to molecule of fungal origin2.19E-04
24GO:0009751: response to salicylic acid2.42E-04
25GO:0009407: toxin catabolic process2.48E-04
26GO:0030026: cellular manganese ion homeostasis3.80E-04
27GO:0010265: SCF complex assembly4.07E-04
28GO:0042759: long-chain fatty acid biosynthetic process4.07E-04
29GO:0032107: regulation of response to nutrient levels4.07E-04
30GO:0080120: CAAX-box protein maturation4.07E-04
31GO:0071586: CAAX-box protein processing4.07E-04
32GO:0051938: L-glutamate import4.07E-04
33GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.07E-04
34GO:0010726: positive regulation of hydrogen peroxide metabolic process4.07E-04
35GO:0010421: hydrogen peroxide-mediated programmed cell death4.07E-04
36GO:0009700: indole phytoalexin biosynthetic process4.07E-04
37GO:0030091: protein repair4.76E-04
38GO:0009636: response to toxic substance5.63E-04
39GO:0009699: phenylpropanoid biosynthetic process5.80E-04
40GO:0006952: defense response5.94E-04
41GO:0010112: regulation of systemic acquired resistance6.96E-04
42GO:0042939: tripeptide transport8.83E-04
43GO:1902000: homogentisate catabolic process8.83E-04
44GO:0019441: tryptophan catabolic process to kynurenine8.83E-04
45GO:0043091: L-arginine import8.83E-04
46GO:0051592: response to calcium ion8.83E-04
47GO:0031648: protein destabilization8.83E-04
48GO:0080183: response to photooxidative stress8.83E-04
49GO:0018022: peptidyl-lysine methylation8.83E-04
50GO:0015802: basic amino acid transport8.83E-04
51GO:0009805: coumarin biosynthetic process8.83E-04
52GO:0009866: induced systemic resistance, ethylene mediated signaling pathway8.83E-04
53GO:0019752: carboxylic acid metabolic process8.83E-04
54GO:0009620: response to fungus1.10E-03
55GO:0009682: induced systemic resistance1.10E-03
56GO:0009737: response to abscisic acid1.24E-03
57GO:0006790: sulfur compound metabolic process1.25E-03
58GO:0034051: negative regulation of plant-type hypersensitive response1.43E-03
59GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.43E-03
60GO:0006556: S-adenosylmethionine biosynthetic process1.43E-03
61GO:0010351: lithium ion transport1.43E-03
62GO:0010272: response to silver ion1.43E-03
63GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.43E-03
64GO:0009072: aromatic amino acid family metabolic process1.43E-03
65GO:0048281: inflorescence morphogenesis1.43E-03
66GO:0009817: defense response to fungus, incompatible interaction1.54E-03
67GO:0002237: response to molecule of bacterial origin1.61E-03
68GO:0046854: phosphatidylinositol phosphorylation1.80E-03
69GO:0006882: cellular zinc ion homeostasis2.07E-03
70GO:0046513: ceramide biosynthetic process2.07E-03
71GO:0048194: Golgi vesicle budding2.07E-03
72GO:0006874: cellular calcium ion homeostasis2.46E-03
73GO:0055114: oxidation-reduction process2.60E-03
74GO:0003333: amino acid transmembrane transport2.70E-03
75GO:0016998: cell wall macromolecule catabolic process2.70E-03
76GO:0042542: response to hydrogen peroxide2.73E-03
77GO:0080142: regulation of salicylic acid biosynthetic process2.78E-03
78GO:0042938: dipeptide transport2.78E-03
79GO:0045088: regulation of innate immune response2.78E-03
80GO:0006536: glutamate metabolic process2.78E-03
81GO:0006621: protein retention in ER lumen2.78E-03
82GO:0009611: response to wounding3.33E-03
83GO:0007029: endoplasmic reticulum organization3.56E-03
84GO:0030308: negative regulation of cell growth3.56E-03
85GO:0000304: response to singlet oxygen3.56E-03
86GO:0009697: salicylic acid biosynthetic process3.56E-03
87GO:0032259: methylation3.60E-03
88GO:0042538: hyperosmotic salinity response3.84E-03
89GO:0042391: regulation of membrane potential4.11E-03
90GO:0006561: proline biosynthetic process4.41E-03
91GO:0010942: positive regulation of cell death4.41E-03
92GO:0010256: endomembrane system organization4.41E-03
93GO:0010555: response to mannitol5.31E-03
94GO:2000067: regulation of root morphogenesis5.31E-03
95GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.31E-03
96GO:0071281: cellular response to iron ion6.23E-03
97GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.28E-03
98GO:0006880: intracellular sequestering of iron ion6.28E-03
99GO:1900056: negative regulation of leaf senescence6.28E-03
100GO:0019745: pentacyclic triterpenoid biosynthetic process6.28E-03
101GO:1900057: positive regulation of leaf senescence6.28E-03
102GO:0009850: auxin metabolic process7.30E-03
103GO:0043068: positive regulation of programmed cell death7.30E-03
104GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.30E-03
105GO:0009819: drought recovery7.30E-03
106GO:0050832: defense response to fungus7.75E-03
107GO:0009615: response to virus7.93E-03
108GO:0010497: plasmodesmata-mediated intercellular transport8.38E-03
109GO:0006526: arginine biosynthetic process8.38E-03
110GO:0043562: cellular response to nitrogen levels8.38E-03
111GO:0009808: lignin metabolic process8.38E-03
112GO:0007186: G-protein coupled receptor signaling pathway8.38E-03
113GO:0009627: systemic acquired resistance8.86E-03
114GO:0007338: single fertilization9.51E-03
115GO:0009821: alkaloid biosynthetic process9.51E-03
116GO:0051865: protein autoubiquitination9.51E-03
117GO:0009738: abscisic acid-activated signaling pathway1.00E-02
118GO:0008202: steroid metabolic process1.07E-02
119GO:2000280: regulation of root development1.07E-02
120GO:0048268: clathrin coat assembly1.07E-02
121GO:0006499: N-terminal protein myristoylation1.14E-02
122GO:0035556: intracellular signal transduction1.16E-02
123GO:0006032: chitin catabolic process1.19E-02
124GO:0009688: abscisic acid biosynthetic process1.19E-02
125GO:0043069: negative regulation of programmed cell death1.19E-02
126GO:0055062: phosphate ion homeostasis1.19E-02
127GO:0006979: response to oxidative stress1.29E-02
128GO:0015770: sucrose transport1.32E-02
129GO:0000272: polysaccharide catabolic process1.32E-02
130GO:0009750: response to fructose1.32E-02
131GO:0010150: leaf senescence1.33E-02
132GO:0012501: programmed cell death1.46E-02
133GO:0015706: nitrate transport1.46E-02
134GO:0002213: defense response to insect1.46E-02
135GO:0007166: cell surface receptor signaling pathway1.57E-02
136GO:0009753: response to jasmonic acid1.58E-02
137GO:0006626: protein targeting to mitochondrion1.59E-02
138GO:0009718: anthocyanin-containing compound biosynthetic process1.59E-02
139GO:0010143: cutin biosynthetic process1.74E-02
140GO:0010053: root epidermal cell differentiation1.88E-02
141GO:0010167: response to nitrate1.88E-02
142GO:0010025: wax biosynthetic process2.04E-02
143GO:0006812: cation transport2.14E-02
144GO:2000377: regulation of reactive oxygen species metabolic process2.19E-02
145GO:0005992: trehalose biosynthetic process2.19E-02
146GO:0080147: root hair cell development2.19E-02
147GO:0009809: lignin biosynthetic process2.30E-02
148GO:0010073: meristem maintenance2.35E-02
149GO:0009695: jasmonic acid biosynthetic process2.35E-02
150GO:0031408: oxylipin biosynthetic process2.51E-02
151GO:0030433: ubiquitin-dependent ERAD pathway2.68E-02
152GO:0035428: hexose transmembrane transport2.68E-02
153GO:0006730: one-carbon metabolic process2.68E-02
154GO:0031348: negative regulation of defense response2.68E-02
155GO:0019748: secondary metabolic process2.68E-02
156GO:0009814: defense response, incompatible interaction2.68E-02
157GO:0009625: response to insect2.85E-02
158GO:0010227: floral organ abscission2.85E-02
159GO:0009693: ethylene biosynthetic process2.85E-02
160GO:0010091: trichome branching3.03E-02
161GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.21E-02
162GO:0046777: protein autophosphorylation3.28E-02
163GO:0018105: peptidyl-serine phosphorylation3.37E-02
164GO:0010087: phloem or xylem histogenesis3.39E-02
165GO:0042631: cellular response to water deprivation3.39E-02
166GO:0046323: glucose import3.58E-02
167GO:0006885: regulation of pH3.58E-02
168GO:0006520: cellular amino acid metabolic process3.58E-02
169GO:0048544: recognition of pollen3.77E-02
170GO:0006814: sodium ion transport3.77E-02
171GO:0042752: regulation of circadian rhythm3.77E-02
172GO:0009851: auxin biosynthetic process3.96E-02
173GO:0006623: protein targeting to vacuole3.96E-02
174GO:0009749: response to glucose3.96E-02
175GO:0000302: response to reactive oxygen species4.15E-02
176GO:0002229: defense response to oomycetes4.15E-02
177GO:0006891: intra-Golgi vesicle-mediated transport4.15E-02
178GO:0010193: response to ozone4.15E-02
179GO:0009567: double fertilization forming a zygote and endosperm4.76E-02
180GO:0007165: signal transduction4.98E-02
RankGO TermAdjusted P value
1GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0005046: KDEL sequence binding0.00E+00
4GO:0008777: acetylornithine deacetylase activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
7GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
8GO:0051670: inulinase activity0.00E+00
9GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
10GO:0005516: calmodulin binding1.23E-06
11GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.45E-06
12GO:0005524: ATP binding2.25E-06
13GO:0004674: protein serine/threonine kinase activity2.88E-06
14GO:0016301: kinase activity2.18E-05
15GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity2.57E-05
16GO:0004364: glutathione transferase activity5.16E-05
17GO:0005388: calcium-transporting ATPase activity1.08E-04
18GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.94E-04
19GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.94E-04
20GO:0009055: electron carrier activity2.98E-04
21GO:0016831: carboxy-lyase activity3.80E-04
22GO:0050660: flavin adenine dinucleotide binding4.06E-04
23GO:0031219: levanase activity4.07E-04
24GO:0031957: very long-chain fatty acid-CoA ligase activity4.07E-04
25GO:0090353: polygalacturonase inhibitor activity4.07E-04
26GO:0051669: fructan beta-fructosidase activity4.07E-04
27GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity4.07E-04
28GO:0004321: fatty-acyl-CoA synthase activity4.07E-04
29GO:0050736: O-malonyltransferase activity8.83E-04
30GO:0042937: tripeptide transporter activity8.83E-04
31GO:0004103: choline kinase activity8.83E-04
32GO:0004566: beta-glucuronidase activity8.83E-04
33GO:0050291: sphingosine N-acyltransferase activity8.83E-04
34GO:0032934: sterol binding8.83E-04
35GO:0004061: arylformamidase activity8.83E-04
36GO:0008171: O-methyltransferase activity9.55E-04
37GO:0004683: calmodulin-dependent protein kinase activity1.35E-03
38GO:0031683: G-protein beta/gamma-subunit complex binding1.43E-03
39GO:0004383: guanylate cyclase activity1.43E-03
40GO:0004478: methionine adenosyltransferase activity1.43E-03
41GO:0001664: G-protein coupled receptor binding1.43E-03
42GO:0008430: selenium binding1.43E-03
43GO:0042409: caffeoyl-CoA O-methyltransferase activity1.43E-03
44GO:0043531: ADP binding1.57E-03
45GO:0030552: cAMP binding1.80E-03
46GO:0030553: cGMP binding1.80E-03
47GO:0015181: arginine transmembrane transporter activity2.07E-03
48GO:0010178: IAA-amino acid conjugate hydrolase activity2.07E-03
49GO:0042299: lupeol synthase activity2.07E-03
50GO:0004351: glutamate decarboxylase activity2.07E-03
51GO:0015189: L-lysine transmembrane transporter activity2.07E-03
52GO:0005216: ion channel activity2.46E-03
53GO:0050302: indole-3-acetaldehyde oxidase activity2.78E-03
54GO:0016866: intramolecular transferase activity2.78E-03
55GO:0016279: protein-lysine N-methyltransferase activity2.78E-03
56GO:0015368: calcium:cation antiporter activity2.78E-03
57GO:0004737: pyruvate decarboxylase activity2.78E-03
58GO:0042936: dipeptide transporter activity2.78E-03
59GO:0015369: calcium:proton antiporter activity2.78E-03
60GO:0046923: ER retention sequence binding2.78E-03
61GO:0005313: L-glutamate transmembrane transporter activity2.78E-03
62GO:0004031: aldehyde oxidase activity2.78E-03
63GO:0004040: amidase activity3.56E-03
64GO:0005496: steroid binding3.56E-03
65GO:0015145: monosaccharide transmembrane transporter activity3.56E-03
66GO:0004672: protein kinase activity3.63E-03
67GO:0005249: voltage-gated potassium channel activity4.11E-03
68GO:0030551: cyclic nucleotide binding4.11E-03
69GO:0030976: thiamine pyrophosphate binding4.41E-03
70GO:0047714: galactolipase activity4.41E-03
71GO:0004029: aldehyde dehydrogenase (NAD) activity4.41E-03
72GO:0102391: decanoate--CoA ligase activity5.31E-03
73GO:0004012: phospholipid-translocating ATPase activity5.31E-03
74GO:0004602: glutathione peroxidase activity5.31E-03
75GO:0004656: procollagen-proline 4-dioxygenase activity5.31E-03
76GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.31E-03
77GO:0046872: metal ion binding5.57E-03
78GO:0004467: long-chain fatty acid-CoA ligase activity6.28E-03
79GO:0008506: sucrose:proton symporter activity6.28E-03
80GO:0008237: metallopeptidase activity7.05E-03
81GO:0004033: aldo-keto reductase (NADP) activity7.30E-03
82GO:0015491: cation:cation antiporter activity7.30E-03
83GO:0004564: beta-fructofuranosidase activity7.30E-03
84GO:0008142: oxysterol binding8.38E-03
85GO:0008970: phosphatidylcholine 1-acylhydrolase activity8.38E-03
86GO:0009931: calcium-dependent protein serine/threonine kinase activity8.86E-03
87GO:0030247: polysaccharide binding9.35E-03
88GO:0016207: 4-coumarate-CoA ligase activity9.51E-03
89GO:0071949: FAD binding9.51E-03
90GO:0005384: manganese ion transmembrane transporter activity1.07E-02
91GO:0016844: strictosidine synthase activity1.07E-02
92GO:0015112: nitrate transmembrane transporter activity1.07E-02
93GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.07E-02
94GO:0004575: sucrose alpha-glucosidase activity1.07E-02
95GO:0005381: iron ion transmembrane transporter activity1.07E-02
96GO:0015174: basic amino acid transmembrane transporter activity1.07E-02
97GO:0005509: calcium ion binding1.09E-02
98GO:0004871: signal transducer activity1.11E-02
99GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.17E-02
100GO:0004713: protein tyrosine kinase activity1.19E-02
101GO:0004568: chitinase activity1.19E-02
102GO:0005545: 1-phosphatidylinositol binding1.19E-02
103GO:0030145: manganese ion binding1.20E-02
104GO:0005506: iron ion binding1.23E-02
105GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.32E-02
106GO:0005543: phospholipid binding1.32E-02
107GO:0004022: alcohol dehydrogenase (NAD) activity1.59E-02
108GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.59E-02
109GO:0005262: calcium channel activity1.59E-02
110GO:0004175: endopeptidase activity1.74E-02
111GO:0030246: carbohydrate binding1.77E-02
112GO:0051537: 2 iron, 2 sulfur cluster binding1.84E-02
113GO:0004970: ionotropic glutamate receptor activity1.88E-02
114GO:0005217: intracellular ligand-gated ion channel activity1.88E-02
115GO:0004190: aspartic-type endopeptidase activity1.88E-02
116GO:0004867: serine-type endopeptidase inhibitor activity1.88E-02
117GO:0008061: chitin binding1.88E-02
118GO:0001046: core promoter sequence-specific DNA binding2.19E-02
119GO:0031418: L-ascorbic acid binding2.19E-02
120GO:0003954: NADH dehydrogenase activity2.19E-02
121GO:0008168: methyltransferase activity2.20E-02
122GO:0016298: lipase activity2.38E-02
123GO:0004707: MAP kinase activity2.51E-02
124GO:0015171: amino acid transmembrane transporter activity2.55E-02
125GO:0045735: nutrient reservoir activity2.72E-02
126GO:0022891: substrate-specific transmembrane transporter activity2.85E-02
127GO:0004497: monooxygenase activity3.02E-02
128GO:0061630: ubiquitin protein ligase activity3.22E-02
129GO:0015035: protein disulfide oxidoreductase activity3.37E-02
130GO:0005451: monovalent cation:proton antiporter activity3.39E-02
131GO:0052689: carboxylic ester hydrolase activity3.42E-02
132GO:0004527: exonuclease activity3.58E-02
133GO:0005199: structural constituent of cell wall3.58E-02
134GO:0030276: clathrin binding3.58E-02
135GO:0008080: N-acetyltransferase activity3.58E-02
136GO:0005355: glucose transmembrane transporter activity3.77E-02
137GO:0015299: solute:proton antiporter activity3.77E-02
138GO:0004872: receptor activity3.96E-02
139GO:0030170: pyridoxal phosphate binding4.53E-02
140GO:0004252: serine-type endopeptidase activity4.53E-02
141GO:0015385: sodium:proton antiporter activity4.55E-02
142GO:0016722: oxidoreductase activity, oxidizing metal ions4.97E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane6.78E-09
2GO:0005783: endoplasmic reticulum8.58E-08
3GO:0016021: integral component of membrane4.46E-07
4GO:0005789: endoplasmic reticulum membrane4.92E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane8.83E-04
6GO:0009530: primary cell wall1.43E-03
7GO:0005887: integral component of plasma membrane1.88E-03
8GO:0005794: Golgi apparatus2.07E-03
9GO:0031461: cullin-RING ubiquitin ligase complex2.07E-03
10GO:0010168: ER body4.41E-03
11GO:0005829: cytosol4.67E-03
12GO:0005801: cis-Golgi network5.31E-03
13GO:0000794: condensed nuclear chromosome6.28E-03
14GO:0005618: cell wall6.81E-03
15GO:0048046: apoplast1.28E-02
16GO:0005765: lysosomal membrane1.32E-02
17GO:0005819: spindle1.44E-02
18GO:0005795: Golgi stack1.88E-02
19GO:0030176: integral component of endoplasmic reticulum membrane1.88E-02
20GO:0005576: extracellular region2.14E-02
21GO:0005905: clathrin-coated pit2.51E-02
22GO:0016020: membrane2.58E-02
23GO:0005834: heterotrimeric G-protein complex2.90E-02
24GO:0030136: clathrin-coated vesicle3.21E-02
25GO:0005770: late endosome3.58E-02
26GO:0019898: extrinsic component of membrane3.96E-02
27GO:0009524: phragmoplast4.31E-02
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Gene type



Gene DE type