Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002376: immune system process0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0006793: phosphorus metabolic process0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0051245: negative regulation of cellular defense response6.42E-05
6GO:0033306: phytol metabolic process6.42E-05
7GO:0043069: negative regulation of programmed cell death6.67E-05
8GO:0019752: carboxylic acid metabolic process1.55E-04
9GO:0019441: tryptophan catabolic process to kynurenine1.55E-04
10GO:0051592: response to calcium ion1.55E-04
11GO:0018022: peptidyl-lysine methylation1.55E-04
12GO:0015914: phospholipid transport1.55E-04
13GO:0006672: ceramide metabolic process1.55E-04
14GO:0006501: C-terminal protein lipidation1.55E-04
15GO:0009863: salicylic acid mediated signaling pathway1.75E-04
16GO:0009814: defense response, incompatible interaction2.37E-04
17GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening2.63E-04
18GO:0010359: regulation of anion channel activity2.63E-04
19GO:0010351: lithium ion transport2.63E-04
20GO:0009410: response to xenobiotic stimulus2.63E-04
21GO:0048281: inflorescence morphogenesis2.63E-04
22GO:0006612: protein targeting to membrane3.82E-04
23GO:0006882: cellular zinc ion homeostasis3.82E-04
24GO:0034219: carbohydrate transmembrane transport3.82E-04
25GO:0010150: leaf senescence5.04E-04
26GO:0080142: regulation of salicylic acid biosynthetic process5.10E-04
27GO:0044804: nucleophagy5.10E-04
28GO:0010483: pollen tube reception5.10E-04
29GO:0010363: regulation of plant-type hypersensitive response5.10E-04
30GO:0009697: salicylic acid biosynthetic process6.45E-04
31GO:0000422: mitophagy6.45E-04
32GO:0030308: negative regulation of cell growth6.45E-04
33GO:0009816: defense response to bacterium, incompatible interaction6.66E-04
34GO:0000045: autophagosome assembly7.90E-04
35GO:1902456: regulation of stomatal opening7.90E-04
36GO:0098655: cation transmembrane transport9.40E-04
37GO:0030026: cellular manganese ion homeostasis1.10E-03
38GO:0006605: protein targeting1.26E-03
39GO:0009061: anaerobic respiration1.26E-03
40GO:0009819: drought recovery1.26E-03
41GO:0030968: endoplasmic reticulum unfolded protein response1.44E-03
42GO:0043562: cellular response to nitrogen levels1.44E-03
43GO:0009808: lignin metabolic process1.44E-03
44GO:0010112: regulation of systemic acquired resistance1.62E-03
45GO:0007338: single fertilization1.62E-03
46GO:0019432: triglyceride biosynthetic process1.62E-03
47GO:0008202: steroid metabolic process1.81E-03
48GO:0055062: phosphate ion homeostasis2.01E-03
49GO:0015770: sucrose transport2.21E-03
50GO:0009624: response to nematode2.45E-03
51GO:0007034: vacuolar transport2.87E-03
52GO:0002237: response to molecule of bacterial origin2.87E-03
53GO:0070588: calcium ion transmembrane transport3.09E-03
54GO:0010053: root epidermal cell differentiation3.09E-03
55GO:0005985: sucrose metabolic process3.09E-03
56GO:2000377: regulation of reactive oxygen species metabolic process3.57E-03
57GO:0009738: abscisic acid-activated signaling pathway3.63E-03
58GO:0006874: cellular calcium ion homeostasis3.82E-03
59GO:0015992: proton transport4.08E-03
60GO:0048278: vesicle docking4.08E-03
61GO:0071456: cellular response to hypoxia4.34E-03
62GO:0009625: response to insect4.60E-03
63GO:0010091: trichome branching4.87E-03
64GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.15E-03
65GO:0042631: cellular response to water deprivation5.43E-03
66GO:0042391: regulation of membrane potential5.43E-03
67GO:0006520: cellular amino acid metabolic process5.72E-03
68GO:0061025: membrane fusion6.01E-03
69GO:0006814: sodium ion transport6.01E-03
70GO:0009646: response to absence of light6.01E-03
71GO:0008654: phospholipid biosynthetic process6.31E-03
72GO:0000302: response to reactive oxygen species6.61E-03
73GO:0006914: autophagy7.55E-03
74GO:0009567: double fertilization forming a zygote and endosperm7.55E-03
75GO:0010200: response to chitin8.31E-03
76GO:0006906: vesicle fusion9.22E-03
77GO:0042742: defense response to bacterium9.27E-03
78GO:0010119: regulation of stomatal movement1.14E-02
79GO:0009867: jasmonic acid mediated signaling pathway1.22E-02
80GO:0006887: exocytosis1.37E-02
81GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.66E-02
82GO:0006812: cation transport1.71E-02
83GO:0009846: pollen germination1.71E-02
84GO:0006486: protein glycosylation1.80E-02
85GO:0048367: shoot system development2.07E-02
86GO:0035556: intracellular signal transduction2.23E-02
87GO:0018105: peptidyl-serine phosphorylation2.36E-02
88GO:0009737: response to abscisic acid2.41E-02
89GO:0009790: embryo development3.02E-02
90GO:0009451: RNA modification3.46E-02
91GO:0050832: defense response to fungus3.65E-02
92GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.69E-02
93GO:0007166: cell surface receptor signaling pathway3.75E-02
94GO:0009617: response to bacterium3.86E-02
95GO:0006468: protein phosphorylation4.07E-02
96GO:0045944: positive regulation of transcription from RNA polymerase II promoter4.40E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
3GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity6.42E-05
4GO:0004061: arylformamidase activity1.55E-04
5GO:0032934: sterol binding1.55E-04
6GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding1.55E-04
7GO:0005516: calmodulin binding2.11E-04
8GO:0008430: selenium binding2.63E-04
9GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides3.82E-04
10GO:0019776: Atg8 ligase activity5.10E-04
11GO:0016279: protein-lysine N-methyltransferase activity5.10E-04
12GO:0015368: calcium:cation antiporter activity5.10E-04
13GO:0015369: calcium:proton antiporter activity5.10E-04
14GO:0005496: steroid binding6.45E-04
15GO:0031593: polyubiquitin binding7.90E-04
16GO:0030976: thiamine pyrophosphate binding7.90E-04
17GO:0004605: phosphatidate cytidylyltransferase activity7.90E-04
18GO:0004144: diacylglycerol O-acyltransferase activity9.40E-04
19GO:0016831: carboxy-lyase activity1.10E-03
20GO:0008506: sucrose:proton symporter activity1.10E-03
21GO:0015491: cation:cation antiporter activity1.26E-03
22GO:0008142: oxysterol binding1.44E-03
23GO:0071949: FAD binding1.62E-03
24GO:0004713: protein tyrosine kinase activity2.01E-03
25GO:0005543: phospholipid binding2.21E-03
26GO:0008794: arsenate reductase (glutaredoxin) activity2.21E-03
27GO:0005388: calcium-transporting ATPase activity2.64E-03
28GO:0000175: 3'-5'-exoribonuclease activity2.64E-03
29GO:0004535: poly(A)-specific ribonuclease activity2.87E-03
30GO:0030552: cAMP binding3.09E-03
31GO:0030553: cGMP binding3.09E-03
32GO:0005216: ion channel activity3.82E-03
33GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.92E-03
34GO:0008408: 3'-5' exonuclease activity4.08E-03
35GO:0004540: ribonuclease activity4.08E-03
36GO:0005249: voltage-gated potassium channel activity5.43E-03
37GO:0030551: cyclic nucleotide binding5.43E-03
38GO:0004527: exonuclease activity5.72E-03
39GO:0043565: sequence-specific DNA binding6.47E-03
40GO:0051213: dioxygenase activity8.54E-03
41GO:0009931: calcium-dependent protein serine/threonine kinase activity9.22E-03
42GO:0004683: calmodulin-dependent protein kinase activity9.57E-03
43GO:0004871: signal transducer activity1.01E-02
44GO:0050897: cobalt ion binding1.14E-02
45GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.22E-02
46GO:0000149: SNARE binding1.29E-02
47GO:0004712: protein serine/threonine/tyrosine kinase activity1.29E-02
48GO:0004364: glutathione transferase activity1.41E-02
49GO:0005484: SNAP receptor activity1.45E-02
50GO:0005198: structural molecule activity1.58E-02
51GO:0005515: protein binding1.81E-02
52GO:0016301: kinase activity1.82E-02
53GO:0016298: lipase activity1.84E-02
54GO:0015035: protein disulfide oxidoreductase activity2.36E-02
55GO:0030170: pyridoxal phosphate binding2.92E-02
56GO:0015144: carbohydrate transmembrane transporter activity3.08E-02
57GO:0005351: sugar:proton symporter activity3.35E-02
58GO:0005509: calcium ion binding3.94E-02
59GO:0042802: identical protein binding4.04E-02
60GO:0008168: methyltransferase activity4.52E-02
RankGO TermAdjusted P value
1GO:0005783: endoplasmic reticulum5.37E-05
2GO:0030014: CCR4-NOT complex6.42E-05
3GO:0034274: Atg12-Atg5-Atg16 complex1.55E-04
4GO:0030139: endocytic vesicle2.63E-04
5GO:0005789: endoplasmic reticulum membrane7.87E-04
6GO:0031902: late endosome membrane1.20E-03
7GO:0034045: pre-autophagosomal structure membrane1.44E-03
8GO:0005887: integral component of plasma membrane2.70E-03
9GO:0030176: integral component of endoplasmic reticulum membrane3.09E-03
10GO:0016020: membrane5.56E-03
11GO:0005778: peroxisomal membrane7.88E-03
12GO:0016021: integral component of membrane8.89E-03
13GO:0031201: SNARE complex1.37E-02
14GO:0005886: plasma membrane1.68E-02
15GO:0005794: Golgi apparatus2.06E-02
16GO:0010008: endosome membrane2.07E-02
17GO:0005834: heterotrimeric G-protein complex2.12E-02
18GO:0012505: endomembrane system2.26E-02
19GO:0005773: vacuole2.35E-02
20GO:0010287: plastoglobule2.61E-02
21GO:0005623: cell2.76E-02
22GO:0009705: plant-type vacuole membrane3.41E-02
23GO:0005622: intracellular3.75E-02
24GO:0005774: vacuolar membrane4.40E-02
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Gene type



Gene DE type