co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G58300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006223: uracil salvage	0.00E+00
2	GO:0070125: mitochondrial translational elongation	0.00E+00
3	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
4	GO:0042407: cristae formation	0.00E+00
5	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
6	GO:0042026: protein refolding	3.42E-06
7	GO:0080183: response to photooxidative stress	6.44E-05
8	GO:0006423: cysteinyl-tRNA aminoacylation	6.44E-05
9	GO:0007005: mitochondrion organization	6.47E-05
10	GO:0016117: carotenoid biosynthetic process	8.63E-05
11	GO:0006696: ergosterol biosynthetic process	1.13E-04
12	GO:0043572: plastid fission	1.69E-04
13	GO:0051085: chaperone mediated protein folding requiring cofactor	1.69E-04
14	GO:0009658: chloroplast organization	1.84E-04
15	GO:0006546: glycine catabolic process	2.30E-04
16	GO:0044206: UMP salvage	2.30E-04
17	GO:0043097: pyrimidine nucleoside salvage	2.95E-04
18	GO:0006555: methionine metabolic process	3.65E-04
19	GO:0010358: leaf shaping	3.65E-04
20	GO:0006206: pyrimidine nucleobase metabolic process	3.65E-04
21	GO:0006458: 'de novo' protein folding	4.36E-04
22	GO:0010555: response to mannitol	4.36E-04
23	GO:0006955: immune response	5.11E-04
24	GO:0048564: photosystem I assembly	5.89E-04
25	GO:0009642: response to light intensity	5.89E-04
26	GO:0046686: response to cadmium ion	5.94E-04
27	GO:0010233: phloem transport	6.69E-04
28	GO:0043067: regulation of programmed cell death	8.38E-04
29	GO:0035999: tetrahydrofolate interconversion	8.38E-04
30	GO:0018119: peptidyl-cysteine S-nitrosylation	1.01E-03
31	GO:0045037: protein import into chloroplast stroma	1.11E-03
32	GO:0010020: chloroplast fission	1.30E-03
33	GO:0019253: reductive pentose-phosphate cycle	1.30E-03
34	GO:0019344: cysteine biosynthetic process	1.61E-03
35	GO:0009116: nucleoside metabolic process	1.61E-03
36	GO:0006418: tRNA aminoacylation for protein translation	1.72E-03
37	GO:0007017: microtubule-based process	1.72E-03
38	GO:0016998: cell wall macromolecule catabolic process	1.83E-03
39	GO:0061077: chaperone-mediated protein folding	1.83E-03
40	GO:0080092: regulation of pollen tube growth	1.95E-03
41	GO:0006730: one-carbon metabolic process	1.95E-03
42	GO:0000413: protein peptidyl-prolyl isomerization	2.42E-03
43	GO:0010051: xylem and phloem pattern formation	2.42E-03
44	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.54E-03
45	GO:0010197: polar nucleus fusion	2.55E-03
46	GO:0009741: response to brassinosteroid	2.55E-03
47	GO:0010268: brassinosteroid homeostasis	2.55E-03
48	GO:0010305: leaf vascular tissue pattern formation	2.55E-03
49	GO:0007018: microtubule-based movement	2.68E-03
50	GO:0016132: brassinosteroid biosynthetic process	2.94E-03
51	GO:0009409: response to cold	2.95E-03
52	GO:0032502: developmental process	3.07E-03
53	GO:0016125: sterol metabolic process	3.34E-03
54	GO:0010286: heat acclimation	3.48E-03
55	GO:0009607: response to biotic stimulus	3.91E-03
56	GO:0009627: systemic acquired resistance	4.06E-03
57	GO:0048481: plant ovule development	4.52E-03
58	GO:0008219: cell death	4.52E-03
59	GO:0009867: jasmonic acid mediated signaling pathway	5.31E-03
60	GO:0006839: mitochondrial transport	5.81E-03
61	GO:0009793: embryo development ending in seed dormancy	5.82E-03
62	GO:0009735: response to cytokinin	5.83E-03
63	GO:0009744: response to sucrose	6.32E-03
64	GO:0042538: hyperosmotic salinity response	7.40E-03
65	GO:0006457: protein folding	8.25E-03
66	GO:0006096: glycolytic process	8.74E-03
67	GO:0009742: brassinosteroid mediated signaling pathway	1.04E-02
68	GO:0009790: embryo development	1.30E-02
69	GO:0016036: cellular response to phosphate starvation	1.39E-02
70	GO:0009826: unidimensional cell growth	1.94E-02
71	GO:0009860: pollen tube growth	2.10E-02
72	GO:0048366: leaf development	2.24E-02
73	GO:0009753: response to jasmonic acid	3.23E-02
74	GO:0008152: metabolic process	3.29E-02
75	GO:0009734: auxin-activated signaling pathway	3.92E-02
76	GO:0009651: response to salt stress	4.34E-02
77	GO:0009416: response to light stimulus	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
2	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
3	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
4	GO:0046905: phytoene synthase activity	0.00E+00
5	GO:0044183: protein binding involved in protein folding	1.94E-05
6	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	2.53E-05
7	GO:0010012: steroid 22-alpha hydroxylase activity	2.53E-05
8	GO:0042834: peptidoglycan binding	2.53E-05
9	GO:0051996: squalene synthase activity	2.53E-05
10	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	6.44E-05
11	GO:0004618: phosphoglycerate kinase activity	6.44E-05
12	GO:0004047: aminomethyltransferase activity	6.44E-05
13	GO:0004817: cysteine-tRNA ligase activity	6.44E-05
14	GO:0030267: glyoxylate reductase (NADP) activity	1.13E-04
15	GO:0002161: aminoacyl-tRNA editing activity	1.13E-04
16	GO:0004845: uracil phosphoribosyltransferase activity	2.30E-04
17	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.30E-04
18	GO:0080030: methyl indole-3-acetate esterase activity	3.65E-04
19	GO:0004849: uridine kinase activity	4.36E-04
20	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.36E-04
21	GO:0051082: unfolded protein binding	7.77E-04
22	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.01E-03
23	GO:0000049: tRNA binding	1.11E-03
24	GO:0004565: beta-galactosidase activity	1.20E-03
25	GO:0005524: ATP binding	1.65E-03
26	GO:0004176: ATP-dependent peptidase activity	1.83E-03
27	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.83E-03
28	GO:0004812: aminoacyl-tRNA ligase activity	2.30E-03
29	GO:0005200: structural constituent of cytoskeleton	3.48E-03
30	GO:0008483: transaminase activity	3.48E-03
31	GO:0008237: metallopeptidase activity	3.48E-03
32	GO:0005515: protein binding	3.49E-03
33	GO:0016597: amino acid binding	3.63E-03
34	GO:0004222: metalloendopeptidase activity	4.83E-03
35	GO:0003746: translation elongation factor activity	5.31E-03
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.04E-03
37	GO:0003777: microtubule motor activity	8.35E-03
38	GO:0005525: GTP binding	1.05E-02
39	GO:0019843: rRNA binding	1.17E-02
40	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.19E-02
41	GO:0008565: protein transporter activity	1.32E-02
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.39E-02
43	GO:0008017: microtubule binding	1.51E-02
44	GO:0016491: oxidoreductase activity	1.71E-02
45	GO:0003729: mRNA binding	1.93E-02
46	GO:0016788: hydrolase activity, acting on ester bonds	2.02E-02
47	GO:0003924: GTPase activity	3.07E-02
48	GO:0016887: ATPase activity	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	2.40E-12
2	GO:0009941: chloroplast envelope	8.02E-12
3	GO:0009507: chloroplast	1.61E-09
4	GO:0010319: stromule	3.40E-06
5	GO:0022626: cytosolic ribosome	8.25E-05
6	GO:0048046: apoplast	4.15E-04
7	GO:0045298: tubulin complex	7.52E-04
8	GO:0009706: chloroplast inner membrane	7.77E-04
9	GO:0016324: apical plasma membrane	9.24E-04
10	GO:0009535: chloroplast thylakoid membrane	1.02E-03
11	GO:0009579: thylakoid	1.05E-03
12	GO:0030659: cytoplasmic vesicle membrane	1.30E-03
13	GO:0005871: kinesin complex	2.30E-03
14	GO:0005874: microtubule	2.38E-03
15	GO:0009536: plastid	2.61E-03
16	GO:0031977: thylakoid lumen	5.98E-03
17	GO:0005739: mitochondrion	6.04E-03
18	GO:0005829: cytosol	6.46E-03
19	GO:0010287: plastoglobule	1.12E-02
20	GO:0005623: cell	1.19E-02
21	GO:0005759: mitochondrial matrix	1.37E-02
22	GO:0005773: vacuole	1.67E-02
23	GO:0046658: anchored component of plasma membrane	1.79E-02
24	GO:0031969: chloroplast membrane	2.32E-02
25	GO:0005743: mitochondrial inner membrane	2.91E-02
26	GO:0005886: plasma membrane	3.44E-02