Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58220

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001143: N-methylnicotinate transport0.00E+00
2GO:0072660: maintenance of protein location in plasma membrane0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:2001142: nicotinate transport0.00E+00
5GO:0006721: terpenoid metabolic process0.00E+00
6GO:0006468: protein phosphorylation2.10E-09
7GO:0042742: defense response to bacterium3.83E-09
8GO:0031349: positive regulation of defense response2.23E-06
9GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.56E-06
10GO:0072661: protein targeting to plasma membrane8.14E-06
11GO:0006952: defense response9.43E-06
12GO:0043069: negative regulation of programmed cell death1.30E-05
13GO:0060548: negative regulation of cell death3.41E-05
14GO:0009863: salicylic acid mediated signaling pathway5.49E-05
15GO:0006099: tricarboxylic acid cycle6.86E-05
16GO:0010942: positive regulation of cell death8.04E-05
17GO:0031348: negative regulation of defense response8.56E-05
18GO:0007166: cell surface receptor signaling pathway1.40E-04
19GO:0006102: isocitrate metabolic process1.88E-04
20GO:0016487: farnesol metabolic process2.18E-04
21GO:0051245: negative regulation of cellular defense response2.18E-04
22GO:0055081: anion homeostasis2.18E-04
23GO:0006680: glucosylceramide catabolic process2.18E-04
24GO:0060862: negative regulation of floral organ abscission2.18E-04
25GO:0015780: nucleotide-sugar transport2.82E-04
26GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.36E-04
27GO:0009627: systemic acquired resistance4.00E-04
28GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.86E-04
29GO:0080185: effector dependent induction by symbiont of host immune response4.86E-04
30GO:0010618: aerenchyma formation4.86E-04
31GO:0080181: lateral root branching4.86E-04
32GO:0006695: cholesterol biosynthetic process4.86E-04
33GO:0051258: protein polymerization4.86E-04
34GO:0015865: purine nucleotide transport4.86E-04
35GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.86E-04
36GO:0050832: defense response to fungus7.07E-04
37GO:0009751: response to salicylic acid7.51E-04
38GO:0015783: GDP-fucose transport7.90E-04
39GO:0006517: protein deglycosylation7.90E-04
40GO:0015695: organic cation transport7.90E-04
41GO:0055074: calcium ion homeostasis7.90E-04
42GO:1900140: regulation of seedling development7.90E-04
43GO:0006487: protein N-linked glycosylation9.15E-04
44GO:0080147: root hair cell development9.15E-04
45GO:0008643: carbohydrate transport9.99E-04
46GO:0016998: cell wall macromolecule catabolic process1.10E-03
47GO:0000187: activation of MAPK activity1.13E-03
48GO:0046713: borate transport1.13E-03
49GO:0046902: regulation of mitochondrial membrane permeability1.13E-03
50GO:0072334: UDP-galactose transmembrane transport1.13E-03
51GO:0010148: transpiration1.13E-03
52GO:0006516: glycoprotein catabolic process1.13E-03
53GO:0006612: protein targeting to membrane1.13E-03
54GO:0015696: ammonium transport1.13E-03
55GO:0071323: cellular response to chitin1.13E-03
56GO:0006515: misfolded or incompletely synthesized protein catabolic process1.13E-03
57GO:0072488: ammonium transmembrane transport1.50E-03
58GO:0010363: regulation of plant-type hypersensitive response1.50E-03
59GO:0010188: response to microbial phytotoxin1.50E-03
60GO:0009626: plant-type hypersensitive response1.76E-03
61GO:0009620: response to fungus1.83E-03
62GO:0031365: N-terminal protein amino acid modification1.91E-03
63GO:0006465: signal peptide processing1.91E-03
64GO:0000304: response to singlet oxygen1.91E-03
65GO:0006090: pyruvate metabolic process1.91E-03
66GO:0030041: actin filament polymerization1.91E-03
67GO:0046283: anthocyanin-containing compound metabolic process1.91E-03
68GO:0006623: protein targeting to vacuole2.06E-03
69GO:0000302: response to reactive oxygen species2.20E-03
70GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.35E-03
71GO:0060918: auxin transport2.35E-03
72GO:0009759: indole glucosinolate biosynthetic process2.35E-03
73GO:0030163: protein catabolic process2.50E-03
74GO:0010310: regulation of hydrogen peroxide metabolic process2.83E-03
75GO:0006694: steroid biosynthetic process2.83E-03
76GO:0016126: sterol biosynthetic process3.17E-03
77GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.33E-03
78GO:0071446: cellular response to salicylic acid stimulus3.33E-03
79GO:1900056: negative regulation of leaf senescence3.33E-03
80GO:0009816: defense response to bacterium, incompatible interaction3.35E-03
81GO:0006906: vesicle fusion3.53E-03
82GO:0009787: regulation of abscisic acid-activated signaling pathway3.86E-03
83GO:0030162: regulation of proteolysis3.86E-03
84GO:0006605: protein targeting3.86E-03
85GO:0008219: cell death4.12E-03
86GO:0009817: defense response to fungus, incompatible interaction4.12E-03
87GO:2000031: regulation of salicylic acid mediated signaling pathway4.42E-03
88GO:0009699: phenylpropanoid biosynthetic process4.42E-03
89GO:0006002: fructose 6-phosphate metabolic process4.42E-03
90GO:0010497: plasmodesmata-mediated intercellular transport4.42E-03
91GO:0010120: camalexin biosynthetic process4.42E-03
92GO:0010204: defense response signaling pathway, resistance gene-independent4.42E-03
93GO:0010119: regulation of stomatal movement4.76E-03
94GO:0010112: regulation of systemic acquired resistance5.00E-03
95GO:0009617: response to bacterium5.13E-03
96GO:0009867: jasmonic acid mediated signaling pathway5.22E-03
97GO:2000280: regulation of root development5.62E-03
98GO:0006887: exocytosis6.20E-03
99GO:0010215: cellulose microfibril organization6.25E-03
100GO:0006032: chitin catabolic process6.25E-03
101GO:0019684: photosynthesis, light reaction6.91E-03
102GO:0055114: oxidation-reduction process7.82E-03
103GO:0031347: regulation of defense response8.15E-03
104GO:0006108: malate metabolic process8.30E-03
105GO:0007165: signal transduction8.70E-03
106GO:0042343: indole glucosinolate metabolic process9.79E-03
107GO:0070588: calcium ion transmembrane transport9.79E-03
108GO:0010200: response to chitin9.82E-03
109GO:0016192: vesicle-mediated transport1.00E-02
110GO:0000162: tryptophan biosynthetic process1.06E-02
111GO:0034976: response to endoplasmic reticulum stress1.06E-02
112GO:0045454: cell redox homeostasis1.18E-02
113GO:0055085: transmembrane transport1.20E-02
114GO:0009409: response to cold1.22E-02
115GO:0006886: intracellular protein transport1.23E-02
116GO:0015992: proton transport1.30E-02
117GO:0098542: defense response to other organism1.30E-02
118GO:0048278: vesicle docking1.30E-02
119GO:0009814: defense response, incompatible interaction1.39E-02
120GO:2000022: regulation of jasmonic acid mediated signaling pathway1.39E-02
121GO:0009306: protein secretion1.57E-02
122GO:0000413: protein peptidyl-prolyl isomerization1.75E-02
123GO:0010051: xylem and phloem pattern formation1.75E-02
124GO:0010197: polar nucleus fusion1.85E-02
125GO:0061025: membrane fusion1.95E-02
126GO:0010183: pollen tube guidance2.05E-02
127GO:0016132: brassinosteroid biosynthetic process2.15E-02
128GO:0010193: response to ozone2.15E-02
129GO:0006979: response to oxidative stress2.44E-02
130GO:0051607: defense response to virus2.68E-02
131GO:0001666: response to hypoxia2.79E-02
132GO:0009615: response to virus2.79E-02
133GO:0009607: response to biotic stimulus2.91E-02
134GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.91E-02
135GO:0016049: cell growth3.25E-02
136GO:0015031: protein transport3.43E-02
137GO:0010311: lateral root formation3.49E-02
138GO:0009631: cold acclimation3.74E-02
139GO:0045087: innate immune response3.99E-02
140GO:0080167: response to karrikin4.30E-02
141GO:0006457: protein folding4.35E-02
142GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.44E-02
143GO:0044550: secondary metabolite biosynthetic process4.66E-02
144GO:0051707: response to other organism4.78E-02
145GO:0006508: proteolysis4.81E-02
RankGO TermAdjusted P value
1GO:0008752: FMN reductase activity0.00E+00
2GO:0047598: 7-dehydrocholesterol reductase activity0.00E+00
3GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
4GO:0090416: nicotinate transporter activity0.00E+00
5GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
6GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
7GO:0009918: sterol delta7 reductase activity0.00E+00
8GO:0005212: structural constituent of eye lens0.00E+00
9GO:0052873: FMN reductase (NADPH) activity0.00E+00
10GO:0000247: C-8 sterol isomerase activity0.00E+00
11GO:0047750: cholestenol delta-isomerase activity0.00E+00
12GO:0047886: farnesol dehydrogenase activity0.00E+00
13GO:0090417: N-methylnicotinate transporter activity0.00E+00
14GO:0016301: kinase activity2.02E-07
15GO:0004674: protein serine/threonine kinase activity8.96E-07
16GO:0004656: procollagen-proline 4-dioxygenase activity1.43E-06
17GO:0005524: ATP binding3.84E-06
18GO:0004449: isocitrate dehydrogenase (NAD+) activity1.87E-05
19GO:0004576: oligosaccharyl transferase activity3.41E-05
20GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity5.47E-05
21GO:0004714: transmembrane receptor protein tyrosine kinase activity1.88E-04
22GO:1901149: salicylic acid binding2.18E-04
23GO:0004048: anthranilate phosphoribosyltransferase activity2.18E-04
24GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.18E-04
25GO:0004348: glucosylceramidase activity2.18E-04
26GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.18E-04
27GO:0004775: succinate-CoA ligase (ADP-forming) activity4.86E-04
28GO:0004776: succinate-CoA ligase (GDP-forming) activity4.86E-04
29GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.52E-04
30GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.61E-04
31GO:0004190: aspartic-type endopeptidase activity7.45E-04
32GO:0008061: chitin binding7.45E-04
33GO:0005457: GDP-fucose transmembrane transporter activity7.90E-04
34GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity7.90E-04
35GO:0003955: NAD(P)H dehydrogenase (quinone) activity7.90E-04
36GO:0031418: L-ascorbic acid binding9.15E-04
37GO:0033612: receptor serine/threonine kinase binding1.10E-03
38GO:0035529: NADH pyrophosphatase activity1.13E-03
39GO:0009678: hydrogen-translocating pyrophosphatase activity1.13E-03
40GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.13E-03
41GO:0051287: NAD binding1.15E-03
42GO:0004672: protein kinase activity1.32E-03
43GO:0016298: lipase activity1.37E-03
44GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.50E-03
45GO:0043495: protein anchor1.50E-03
46GO:0004470: malic enzyme activity1.50E-03
47GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.50E-03
48GO:0005459: UDP-galactose transmembrane transporter activity1.91E-03
49GO:0047631: ADP-ribose diphosphatase activity1.91E-03
50GO:0005471: ATP:ADP antiporter activity1.91E-03
51GO:0008519: ammonium transmembrane transporter activity2.35E-03
52GO:0000210: NAD+ diphosphatase activity2.35E-03
53GO:0004029: aldehyde dehydrogenase (NAD) activity2.35E-03
54GO:0004602: glutathione peroxidase activity2.83E-03
55GO:0005338: nucleotide-sugar transmembrane transporter activity3.33E-03
56GO:0008235: metalloexopeptidase activity3.33E-03
57GO:0004427: inorganic diphosphatase activity3.33E-03
58GO:0003872: 6-phosphofructokinase activity3.33E-03
59GO:0004806: triglyceride lipase activity3.72E-03
60GO:0030247: polysaccharide binding3.72E-03
61GO:0004708: MAP kinase kinase activity3.86E-03
62GO:0050897: cobalt ion binding4.76E-03
63GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.62E-03
64GO:0000149: SNARE binding5.70E-03
65GO:0004568: chitinase activity6.25E-03
66GO:0004713: protein tyrosine kinase activity6.25E-03
67GO:0005484: SNAP receptor activity6.73E-03
68GO:0008794: arsenate reductase (glutaredoxin) activity6.91E-03
69GO:0004177: aminopeptidase activity6.91E-03
70GO:0005388: calcium-transporting ATPase activity8.30E-03
71GO:0031625: ubiquitin protein ligase binding1.01E-02
72GO:0005515: protein binding1.05E-02
73GO:0022857: transmembrane transporter activity1.22E-02
74GO:0004871: signal transducer activity1.25E-02
75GO:0042803: protein homodimerization activity1.25E-02
76GO:0004707: MAP kinase activity1.30E-02
77GO:0015035: protein disulfide oxidoreductase activity1.33E-02
78GO:0016746: transferase activity, transferring acyl groups1.33E-02
79GO:0022891: substrate-specific transmembrane transporter activity1.48E-02
80GO:0008810: cellulase activity1.48E-02
81GO:0008514: organic anion transmembrane transporter activity1.57E-02
82GO:0003756: protein disulfide isomerase activity1.57E-02
83GO:0009055: electron carrier activity1.69E-02
84GO:0030276: clathrin binding1.85E-02
85GO:0008565: protein transporter activity1.95E-02
86GO:0010181: FMN binding1.95E-02
87GO:0050662: coenzyme binding1.95E-02
88GO:0015297: antiporter activity2.14E-02
89GO:0005509: calcium ion binding2.14E-02
90GO:0005506: iron ion binding2.36E-02
91GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.57E-02
92GO:0003824: catalytic activity2.77E-02
93GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.37E-02
94GO:0004222: metalloendopeptidase activity3.62E-02
95GO:0030145: manganese ion binding3.74E-02
96GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.74E-02
97GO:0043531: ADP binding3.80E-02
98GO:0004712: protein serine/threonine/tyrosine kinase activity4.25E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.05E-12
2GO:0016021: integral component of membrane2.56E-12
3GO:0005783: endoplasmic reticulum2.45E-07
4GO:0005794: Golgi apparatus1.53E-06
5GO:0030665: clathrin-coated vesicle membrane9.86E-06
6GO:0005774: vacuolar membrane2.24E-05
7GO:0008250: oligosaccharyltransferase complex5.47E-05
8GO:0009506: plasmodesma1.65E-04
9GO:0005911: cell-cell junction2.18E-04
10GO:0045252: oxoglutarate dehydrogenase complex2.18E-04
11GO:0005787: signal peptidase complex2.18E-04
12GO:0017119: Golgi transport complex3.94E-04
13GO:0005773: vacuole1.16E-03
14GO:0031225: anchored component of membrane1.23E-03
15GO:0005802: trans-Golgi network1.29E-03
16GO:0005789: endoplasmic reticulum membrane1.44E-03
17GO:0005768: endosome1.67E-03
18GO:0005945: 6-phosphofructokinase complex1.91E-03
19GO:0009504: cell plate2.06E-03
20GO:0005788: endoplasmic reticulum lumen3.35E-03
21GO:0000139: Golgi membrane3.75E-03
22GO:0030131: clathrin adaptor complex3.86E-03
23GO:0031901: early endosome membrane5.00E-03
24GO:0031090: organelle membrane5.00E-03
25GO:0005887: integral component of plasma membrane5.57E-03
26GO:0046658: anchored component of plasma membrane5.86E-03
27GO:0031201: SNARE complex6.20E-03
28GO:0031902: late endosome membrane6.20E-03
29GO:0005740: mitochondrial envelope6.25E-03
30GO:0031012: extracellular matrix8.30E-03
31GO:0030176: integral component of endoplasmic reticulum membrane9.79E-03
32GO:0009505: plant-type cell wall1.07E-02
33GO:0019898: extrinsic component of membrane2.05E-02
34GO:0019005: SCF ubiquitin ligase complex3.37E-02
35GO:0000151: ubiquitin ligase complex3.37E-02
36GO:0016020: membrane4.39E-02
37GO:0090406: pollen tube4.78E-02
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Gene type



Gene DE type