GO Enrichment Analysis of Co-expressed Genes with
AT5G58140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0006066: alcohol metabolic process | 0.00E+00 |
| 7 | GO:0009853: photorespiration | 6.80E-08 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.91E-06 |
| 9 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.57E-06 |
| 10 | GO:0006659: phosphatidylserine biosynthetic process | 7.58E-05 |
| 11 | GO:0015801: aromatic amino acid transport | 7.58E-05 |
| 12 | GO:0000023: maltose metabolic process | 7.58E-05 |
| 13 | GO:0006438: valyl-tRNA aminoacylation | 7.58E-05 |
| 14 | GO:0051775: response to redox state | 7.58E-05 |
| 15 | GO:0009443: pyridoxal 5'-phosphate salvage | 7.58E-05 |
| 16 | GO:0006094: gluconeogenesis | 1.36E-04 |
| 17 | GO:0009767: photosynthetic electron transport chain | 1.36E-04 |
| 18 | GO:0019253: reductive pentose-phosphate cycle | 1.55E-04 |
| 19 | GO:0007154: cell communication | 1.81E-04 |
| 20 | GO:0097054: L-glutamate biosynthetic process | 1.81E-04 |
| 21 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.81E-04 |
| 22 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.81E-04 |
| 23 | GO:0009629: response to gravity | 1.81E-04 |
| 24 | GO:0006810: transport | 2.26E-04 |
| 25 | GO:0055114: oxidation-reduction process | 3.01E-04 |
| 26 | GO:0000913: preprophase band assembly | 3.05E-04 |
| 27 | GO:0031022: nuclear migration along microfilament | 3.05E-04 |
| 28 | GO:0006000: fructose metabolic process | 3.05E-04 |
| 29 | GO:0070828: heterochromatin organization | 3.05E-04 |
| 30 | GO:0016117: carotenoid biosynthetic process | 3.81E-04 |
| 31 | GO:0046836: glycolipid transport | 4.41E-04 |
| 32 | GO:0006107: oxaloacetate metabolic process | 4.41E-04 |
| 33 | GO:0006537: glutamate biosynthetic process | 4.41E-04 |
| 34 | GO:0009791: post-embryonic development | 5.10E-04 |
| 35 | GO:0006021: inositol biosynthetic process | 5.87E-04 |
| 36 | GO:0006734: NADH metabolic process | 5.87E-04 |
| 37 | GO:0009902: chloroplast relocation | 5.87E-04 |
| 38 | GO:0019676: ammonia assimilation cycle | 5.87E-04 |
| 39 | GO:0048442: sepal development | 5.87E-04 |
| 40 | GO:0006546: glycine catabolic process | 5.87E-04 |
| 41 | GO:0010090: trichome morphogenesis | 6.19E-04 |
| 42 | GO:0009904: chloroplast accumulation movement | 7.44E-04 |
| 43 | GO:0016123: xanthophyll biosynthetic process | 7.44E-04 |
| 44 | GO:0009247: glycolipid biosynthetic process | 7.44E-04 |
| 45 | GO:0016120: carotene biosynthetic process | 7.44E-04 |
| 46 | GO:0006544: glycine metabolic process | 7.44E-04 |
| 47 | GO:0043097: pyrimidine nucleoside salvage | 7.44E-04 |
| 48 | GO:0046785: microtubule polymerization | 7.44E-04 |
| 49 | GO:0006563: L-serine metabolic process | 9.07E-04 |
| 50 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 9.07E-04 |
| 51 | GO:0006206: pyrimidine nucleobase metabolic process | 9.07E-04 |
| 52 | GO:0006458: 'de novo' protein folding | 1.08E-03 |
| 53 | GO:0009903: chloroplast avoidance movement | 1.08E-03 |
| 54 | GO:0009854: oxidative photosynthetic carbon pathway | 1.08E-03 |
| 55 | GO:0042026: protein refolding | 1.08E-03 |
| 56 | GO:0010076: maintenance of floral meristem identity | 1.08E-03 |
| 57 | GO:0009658: chloroplast organization | 1.14E-03 |
| 58 | GO:0046686: response to cadmium ion | 1.19E-03 |
| 59 | GO:0009645: response to low light intensity stimulus | 1.26E-03 |
| 60 | GO:0019375: galactolipid biosynthetic process | 1.46E-03 |
| 61 | GO:0009704: de-etiolation | 1.46E-03 |
| 62 | GO:0016559: peroxisome fission | 1.46E-03 |
| 63 | GO:0048564: photosystem I assembly | 1.46E-03 |
| 64 | GO:0006002: fructose 6-phosphate metabolic process | 1.66E-03 |
| 65 | GO:0071482: cellular response to light stimulus | 1.66E-03 |
| 66 | GO:0009657: plastid organization | 1.66E-03 |
| 67 | GO:0006098: pentose-phosphate shunt | 1.87E-03 |
| 68 | GO:0009821: alkaloid biosynthetic process | 1.87E-03 |
| 69 | GO:0035999: tetrahydrofolate interconversion | 2.09E-03 |
| 70 | GO:0048441: petal development | 2.32E-03 |
| 71 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.56E-03 |
| 72 | GO:0009773: photosynthetic electron transport in photosystem I | 2.56E-03 |
| 73 | GO:0006415: translational termination | 2.56E-03 |
| 74 | GO:0019684: photosynthesis, light reaction | 2.56E-03 |
| 75 | GO:0005983: starch catabolic process | 2.80E-03 |
| 76 | GO:0006108: malate metabolic process | 3.06E-03 |
| 77 | GO:0005986: sucrose biosynthetic process | 3.06E-03 |
| 78 | GO:0048440: carpel development | 3.32E-03 |
| 79 | GO:0090351: seedling development | 3.59E-03 |
| 80 | GO:0007031: peroxisome organization | 3.59E-03 |
| 81 | GO:0042343: indole glucosinolate metabolic process | 3.59E-03 |
| 82 | GO:0009058: biosynthetic process | 3.99E-03 |
| 83 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.43E-03 |
| 84 | GO:0006418: tRNA aminoacylation for protein translation | 4.43E-03 |
| 85 | GO:0003333: amino acid transmembrane transport | 4.73E-03 |
| 86 | GO:0098542: defense response to other organism | 4.73E-03 |
| 87 | GO:0061077: chaperone-mediated protein folding | 4.73E-03 |
| 88 | GO:0005975: carbohydrate metabolic process | 4.98E-03 |
| 89 | GO:0009416: response to light stimulus | 5.00E-03 |
| 90 | GO:0080092: regulation of pollen tube growth | 5.03E-03 |
| 91 | GO:0019748: secondary metabolic process | 5.03E-03 |
| 92 | GO:0006730: one-carbon metabolic process | 5.03E-03 |
| 93 | GO:0016226: iron-sulfur cluster assembly | 5.03E-03 |
| 94 | GO:0007623: circadian rhythm | 5.21E-03 |
| 95 | GO:0048443: stamen development | 5.66E-03 |
| 96 | GO:0042631: cellular response to water deprivation | 6.31E-03 |
| 97 | GO:0006342: chromatin silencing | 6.64E-03 |
| 98 | GO:0007018: microtubule-based movement | 6.99E-03 |
| 99 | GO:0006814: sodium ion transport | 6.99E-03 |
| 100 | GO:0019252: starch biosynthetic process | 7.34E-03 |
| 101 | GO:0008654: phospholipid biosynthetic process | 7.34E-03 |
| 102 | GO:0016032: viral process | 8.05E-03 |
| 103 | GO:0000910: cytokinesis | 9.56E-03 |
| 104 | GO:0010027: thylakoid membrane organization | 9.95E-03 |
| 105 | GO:0046777: protein autophosphorylation | 1.07E-02 |
| 106 | GO:0018298: protein-chromophore linkage | 1.20E-02 |
| 107 | GO:0009817: defense response to fungus, incompatible interaction | 1.20E-02 |
| 108 | GO:0048481: plant ovule development | 1.20E-02 |
| 109 | GO:0006865: amino acid transport | 1.37E-02 |
| 110 | GO:0016051: carbohydrate biosynthetic process | 1.42E-02 |
| 111 | GO:0006099: tricarboxylic acid cycle | 1.46E-02 |
| 112 | GO:0009744: response to sucrose | 1.70E-02 |
| 113 | GO:0009644: response to high light intensity | 1.79E-02 |
| 114 | GO:0009409: response to cold | 1.80E-02 |
| 115 | GO:0000165: MAPK cascade | 1.94E-02 |
| 116 | GO:0006417: regulation of translation | 2.25E-02 |
| 117 | GO:0006096: glycolytic process | 2.36E-02 |
| 118 | GO:0048316: seed development | 2.42E-02 |
| 119 | GO:0009626: plant-type hypersensitive response | 2.47E-02 |
| 120 | GO:0009624: response to nematode | 2.69E-02 |
| 121 | GO:0018105: peptidyl-serine phosphorylation | 2.75E-02 |
| 122 | GO:0006396: RNA processing | 2.75E-02 |
| 123 | GO:0009742: brassinosteroid mediated signaling pathway | 2.81E-02 |
| 124 | GO:0009845: seed germination | 3.34E-02 |
| 125 | GO:0009790: embryo development | 3.53E-02 |
| 126 | GO:0006633: fatty acid biosynthetic process | 3.72E-02 |
| 127 | GO:0040008: regulation of growth | 3.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 7 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 8 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 10 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 11 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 12 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 13 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.57E-06 |
| 14 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.05E-05 |
| 15 | GO:0004033: aldo-keto reductase (NADP) activity | 3.68E-05 |
| 16 | GO:0004832: valine-tRNA ligase activity | 7.58E-05 |
| 17 | GO:0008746: NAD(P)+ transhydrogenase activity | 7.58E-05 |
| 18 | GO:0016041: glutamate synthase (ferredoxin) activity | 7.58E-05 |
| 19 | GO:0070006: metalloaminopeptidase activity | 7.58E-05 |
| 20 | GO:0008266: poly(U) RNA binding | 1.55E-04 |
| 21 | GO:0010291: carotene beta-ring hydroxylase activity | 1.81E-04 |
| 22 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.81E-04 |
| 23 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.81E-04 |
| 24 | GO:0015173: aromatic amino acid transmembrane transporter activity | 1.81E-04 |
| 25 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.81E-04 |
| 26 | GO:0004512: inositol-3-phosphate synthase activity | 1.81E-04 |
| 27 | GO:0008967: phosphoglycolate phosphatase activity | 1.81E-04 |
| 28 | GO:0070402: NADPH binding | 3.05E-04 |
| 29 | GO:0032947: protein complex scaffold | 3.05E-04 |
| 30 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.05E-04 |
| 31 | GO:0016149: translation release factor activity, codon specific | 4.41E-04 |
| 32 | GO:0008508: bile acid:sodium symporter activity | 4.41E-04 |
| 33 | GO:0017089: glycolipid transporter activity | 4.41E-04 |
| 34 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.41E-04 |
| 35 | GO:0035250: UDP-galactosyltransferase activity | 4.41E-04 |
| 36 | GO:0048038: quinone binding | 5.45E-04 |
| 37 | GO:0051861: glycolipid binding | 5.87E-04 |
| 38 | GO:0008453: alanine-glyoxylate transaminase activity | 5.87E-04 |
| 39 | GO:0005275: amine transmembrane transporter activity | 7.44E-04 |
| 40 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.44E-04 |
| 41 | GO:0004372: glycine hydroxymethyltransferase activity | 7.44E-04 |
| 42 | GO:0016615: malate dehydrogenase activity | 9.07E-04 |
| 43 | GO:0080030: methyl indole-3-acetate esterase activity | 9.07E-04 |
| 44 | GO:0004332: fructose-bisphosphate aldolase activity | 9.07E-04 |
| 45 | GO:0042578: phosphoric ester hydrolase activity | 9.07E-04 |
| 46 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.08E-03 |
| 47 | GO:0030060: L-malate dehydrogenase activity | 1.08E-03 |
| 48 | GO:0004849: uridine kinase activity | 1.08E-03 |
| 49 | GO:0008135: translation factor activity, RNA binding | 1.66E-03 |
| 50 | GO:0003747: translation release factor activity | 1.87E-03 |
| 51 | GO:0016844: strictosidine synthase activity | 2.09E-03 |
| 52 | GO:0004177: aminopeptidase activity | 2.56E-03 |
| 53 | GO:0044183: protein binding involved in protein folding | 2.56E-03 |
| 54 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.56E-03 |
| 55 | GO:0031409: pigment binding | 3.86E-03 |
| 56 | GO:0051536: iron-sulfur cluster binding | 4.15E-03 |
| 57 | GO:0008017: microtubule binding | 5.46E-03 |
| 58 | GO:0004812: aminoacyl-tRNA ligase activity | 5.98E-03 |
| 59 | GO:0016788: hydrolase activity, acting on ester bonds | 8.21E-03 |
| 60 | GO:0050660: flavin adenine dinucleotide binding | 9.33E-03 |
| 61 | GO:0016168: chlorophyll binding | 1.03E-02 |
| 62 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.07E-02 |
| 63 | GO:0005509: calcium ion binding | 1.11E-02 |
| 64 | GO:0004683: calmodulin-dependent protein kinase activity | 1.12E-02 |
| 65 | GO:0005506: iron ion binding | 1.20E-02 |
| 66 | GO:0050897: cobalt ion binding | 1.33E-02 |
| 67 | GO:0003746: translation elongation factor activity | 1.42E-02 |
| 68 | GO:0005515: protein binding | 1.64E-02 |
| 69 | GO:0004185: serine-type carboxypeptidase activity | 1.70E-02 |
| 70 | GO:0005198: structural molecule activity | 1.84E-02 |
| 71 | GO:0051287: NAD binding | 1.94E-02 |
| 72 | GO:0003777: microtubule motor activity | 2.25E-02 |
| 73 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.42E-02 |
| 74 | GO:0051082: unfolded protein binding | 2.69E-02 |
| 75 | GO:0016787: hydrolase activity | 3.19E-02 |
| 76 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.22E-02 |
| 77 | GO:0005524: ATP binding | 3.26E-02 |
| 78 | GO:0030170: pyridoxal phosphate binding | 3.41E-02 |
| 79 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.47E-02 |
| 80 | GO:0015144: carbohydrate transmembrane transporter activity | 3.59E-02 |
| 81 | GO:0019825: oxygen binding | 3.74E-02 |
| 82 | GO:0005351: sugar:proton symporter activity | 3.91E-02 |
| 83 | GO:0008194: UDP-glycosyltransferase activity | 4.31E-02 |
| 84 | GO:0042802: identical protein binding | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.96E-21 |
| 3 | GO:0009941: chloroplast envelope | 7.28E-15 |
| 4 | GO:0009570: chloroplast stroma | 1.64E-12 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.82E-09 |
| 6 | GO:0048046: apoplast | 1.40E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 1.98E-06 |
| 8 | GO:0005759: mitochondrial matrix | 5.36E-05 |
| 9 | GO:0009782: photosystem I antenna complex | 7.58E-05 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 1.11E-04 |
| 11 | GO:0030095: chloroplast photosystem II | 1.55E-04 |
| 12 | GO:0000792: heterochromatin | 1.81E-04 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 2.44E-04 |
| 14 | GO:0009509: chromoplast | 3.05E-04 |
| 15 | GO:0009706: chloroplast inner membrane | 3.30E-04 |
| 16 | GO:0010287: plastoglobule | 4.13E-04 |
| 17 | GO:0005960: glycine cleavage complex | 4.41E-04 |
| 18 | GO:0019898: extrinsic component of membrane | 5.10E-04 |
| 19 | GO:0010319: stromule | 6.95E-04 |
| 20 | GO:0009579: thylakoid | 1.19E-03 |
| 21 | GO:0005779: integral component of peroxisomal membrane | 1.66E-03 |
| 22 | GO:0016020: membrane | 1.76E-03 |
| 23 | GO:0055028: cortical microtubule | 2.32E-03 |
| 24 | GO:0016324: apical plasma membrane | 2.32E-03 |
| 25 | GO:0030076: light-harvesting complex | 3.59E-03 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 3.79E-03 |
| 27 | GO:0005623: cell | 3.89E-03 |
| 28 | GO:0005777: peroxisome | 5.96E-03 |
| 29 | GO:0000790: nuclear chromatin | 5.98E-03 |
| 30 | GO:0005871: kinesin complex | 5.98E-03 |
| 31 | GO:0009504: cell plate | 7.34E-03 |
| 32 | GO:0005694: chromosome | 8.05E-03 |
| 33 | GO:0005778: peroxisomal membrane | 9.17E-03 |
| 34 | GO:0009707: chloroplast outer membrane | 1.20E-02 |
| 35 | GO:0000786: nucleosome | 1.37E-02 |
| 36 | GO:0005819: spindle | 1.51E-02 |
| 37 | GO:0031977: thylakoid lumen | 1.60E-02 |
| 38 | GO:0005747: mitochondrial respiratory chain complex I | 2.42E-02 |
| 39 | GO:0022626: cytosolic ribosome | 2.52E-02 |
| 40 | GO:0009524: phragmoplast | 3.28E-02 |