GO Enrichment Analysis of Co-expressed Genes with
AT5G57960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 5 | GO:0006546: glycine catabolic process | 1.91E-06 |
| 6 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.91E-06 |
| 7 | GO:0080093: regulation of photorespiration | 4.04E-05 |
| 8 | GO:0031998: regulation of fatty acid beta-oxidation | 4.04E-05 |
| 9 | GO:0051775: response to redox state | 4.04E-05 |
| 10 | GO:0006108: malate metabolic process | 5.43E-05 |
| 11 | GO:0080005: photosystem stoichiometry adjustment | 1.00E-04 |
| 12 | GO:0046741: transport of virus in host, tissue to tissue | 1.00E-04 |
| 13 | GO:0005977: glycogen metabolic process | 1.73E-04 |
| 14 | GO:0006011: UDP-glucose metabolic process | 1.73E-04 |
| 15 | GO:0043572: plastid fission | 2.55E-04 |
| 16 | GO:0046836: glycolipid transport | 2.55E-04 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.55E-04 |
| 18 | GO:0071484: cellular response to light intensity | 2.55E-04 |
| 19 | GO:0006107: oxaloacetate metabolic process | 2.55E-04 |
| 20 | GO:0006734: NADH metabolic process | 3.43E-04 |
| 21 | GO:0009658: chloroplast organization | 4.07E-04 |
| 22 | GO:0010117: photoprotection | 4.37E-04 |
| 23 | GO:0006097: glyoxylate cycle | 4.37E-04 |
| 24 | GO:0043097: pyrimidine nucleoside salvage | 4.37E-04 |
| 25 | GO:0010190: cytochrome b6f complex assembly | 5.37E-04 |
| 26 | GO:0010942: positive regulation of cell death | 5.37E-04 |
| 27 | GO:0006206: pyrimidine nucleobase metabolic process | 5.37E-04 |
| 28 | GO:0009853: photorespiration | 5.76E-04 |
| 29 | GO:0006099: tricarboxylic acid cycle | 6.02E-04 |
| 30 | GO:0009854: oxidative photosynthetic carbon pathway | 6.40E-04 |
| 31 | GO:0009704: de-etiolation | 8.61E-04 |
| 32 | GO:0052543: callose deposition in cell wall | 8.61E-04 |
| 33 | GO:0048564: photosystem I assembly | 8.61E-04 |
| 34 | GO:0071482: cellular response to light stimulus | 9.77E-04 |
| 35 | GO:0009821: alkaloid biosynthetic process | 1.10E-03 |
| 36 | GO:0006098: pentose-phosphate shunt | 1.10E-03 |
| 37 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.49E-03 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 1.49E-03 |
| 39 | GO:0006094: gluconeogenesis | 1.77E-03 |
| 40 | GO:0009058: biosynthetic process | 1.79E-03 |
| 41 | GO:0010020: chloroplast fission | 1.92E-03 |
| 42 | GO:0019253: reductive pentose-phosphate cycle | 1.92E-03 |
| 43 | GO:0055114: oxidation-reduction process | 2.02E-03 |
| 44 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.23E-03 |
| 45 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.55E-03 |
| 46 | GO:0051302: regulation of cell division | 2.55E-03 |
| 47 | GO:0016226: iron-sulfur cluster assembly | 2.89E-03 |
| 48 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.89E-03 |
| 49 | GO:0042631: cellular response to water deprivation | 3.61E-03 |
| 50 | GO:0006520: cellular amino acid metabolic process | 3.80E-03 |
| 51 | GO:0006662: glycerol ether metabolic process | 3.80E-03 |
| 52 | GO:0019252: starch biosynthetic process | 4.19E-03 |
| 53 | GO:0000302: response to reactive oxygen species | 4.38E-03 |
| 54 | GO:0030163: protein catabolic process | 4.79E-03 |
| 55 | GO:0016126: sterol biosynthetic process | 5.64E-03 |
| 56 | GO:0042128: nitrate assimilation | 6.09E-03 |
| 57 | GO:0018298: protein-chromophore linkage | 6.77E-03 |
| 58 | GO:0010218: response to far red light | 7.25E-03 |
| 59 | GO:0046686: response to cadmium ion | 7.55E-03 |
| 60 | GO:0009637: response to blue light | 7.99E-03 |
| 61 | GO:0034599: cellular response to oxidative stress | 8.24E-03 |
| 62 | GO:0000209: protein polyubiquitination | 9.80E-03 |
| 63 | GO:0009644: response to high light intensity | 1.01E-02 |
| 64 | GO:0006855: drug transmembrane transport | 1.06E-02 |
| 65 | GO:0009735: response to cytokinin | 1.06E-02 |
| 66 | GO:0006857: oligopeptide transport | 1.23E-02 |
| 67 | GO:0006417: regulation of translation | 1.26E-02 |
| 68 | GO:0006096: glycolytic process | 1.32E-02 |
| 69 | GO:0010468: regulation of gene expression | 2.52E-02 |
| 70 | GO:0007049: cell cycle | 3.28E-02 |
| 71 | GO:0006810: transport | 3.45E-02 |
| 72 | GO:0080167: response to karrikin | 3.54E-02 |
| 73 | GO:0005975: carbohydrate metabolic process | 3.56E-02 |
| 74 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.63E-02 |
| 75 | GO:0046777: protein autophosphorylation | 3.71E-02 |
| 76 | GO:0015979: photosynthesis | 3.89E-02 |
| 77 | GO:0045454: cell redox homeostasis | 4.02E-02 |
| 78 | GO:0009753: response to jasmonic acid | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 8 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 9 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 9.85E-07 |
| 10 | GO:0016615: malate dehydrogenase activity | 5.05E-06 |
| 11 | GO:0030060: L-malate dehydrogenase activity | 7.36E-06 |
| 12 | GO:0008746: NAD(P)+ transhydrogenase activity | 4.04E-05 |
| 13 | GO:0004328: formamidase activity | 4.04E-05 |
| 14 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 1.73E-04 |
| 15 | GO:0032947: protein complex scaffold | 1.73E-04 |
| 16 | GO:0048038: quinone binding | 2.42E-04 |
| 17 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.55E-04 |
| 18 | GO:0017089: glycolipid transporter activity | 2.55E-04 |
| 19 | GO:0009011: starch synthase activity | 3.43E-04 |
| 20 | GO:0051861: glycolipid binding | 3.43E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.43E-04 |
| 22 | GO:0008453: alanine-glyoxylate transaminase activity | 3.43E-04 |
| 23 | GO:0004506: squalene monooxygenase activity | 3.43E-04 |
| 24 | GO:0004332: fructose-bisphosphate aldolase activity | 5.37E-04 |
| 25 | GO:0004849: uridine kinase activity | 6.40E-04 |
| 26 | GO:0016844: strictosidine synthase activity | 1.22E-03 |
| 27 | GO:0008266: poly(U) RNA binding | 1.92E-03 |
| 28 | GO:0031409: pigment binding | 2.23E-03 |
| 29 | GO:0051536: iron-sulfur cluster binding | 2.39E-03 |
| 30 | GO:0047134: protein-disulfide reductase activity | 3.42E-03 |
| 31 | GO:0008080: N-acetyltransferase activity | 3.80E-03 |
| 32 | GO:0004791: thioredoxin-disulfide reductase activity | 3.99E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.79E-03 |
| 34 | GO:0016168: chlorophyll binding | 5.86E-03 |
| 35 | GO:0015238: drug transmembrane transporter activity | 7.01E-03 |
| 36 | GO:0015293: symporter activity | 1.03E-02 |
| 37 | GO:0005198: structural molecule activity | 1.03E-02 |
| 38 | GO:0051287: NAD binding | 1.09E-02 |
| 39 | GO:0031625: ubiquitin protein ligase binding | 1.26E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.54E-02 |
| 41 | GO:0016829: lyase activity | 1.87E-02 |
| 42 | GO:0030170: pyridoxal phosphate binding | 1.91E-02 |
| 43 | GO:0015297: antiporter activity | 2.15E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 3.08E-02 |
| 45 | GO:0016491: oxidoreductase activity | 3.09E-02 |
| 46 | GO:0050660: flavin adenine dinucleotide binding | 3.37E-02 |
| 47 | GO:0004672: protein kinase activity | 3.45E-02 |
| 48 | GO:0008233: peptidase activity | 3.50E-02 |
| 49 | GO:0061630: ubiquitin protein ligase activity | 3.67E-02 |
| 50 | GO:0009055: electron carrier activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.21E-16 |
| 3 | GO:0005960: glycine cleavage complex | 9.85E-07 |
| 4 | GO:0009941: chloroplast envelope | 1.06E-06 |
| 5 | GO:0009570: chloroplast stroma | 4.07E-06 |
| 6 | GO:0048046: apoplast | 4.39E-06 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 9.30E-06 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.21E-05 |
| 9 | GO:0009534: chloroplast thylakoid | 3.61E-05 |
| 10 | GO:0009579: thylakoid | 3.38E-04 |
| 11 | GO:0031977: thylakoid lumen | 6.80E-04 |
| 12 | GO:0010287: plastoglobule | 1.61E-03 |
| 13 | GO:0019013: viral nucleocapsid | 1.77E-03 |
| 14 | GO:0030076: light-harvesting complex | 2.07E-03 |
| 15 | GO:0005777: peroxisome | 2.10E-03 |
| 16 | GO:0005773: vacuole | 2.36E-03 |
| 17 | GO:0009522: photosystem I | 3.99E-03 |
| 18 | GO:0009523: photosystem II | 4.19E-03 |
| 19 | GO:0031969: chloroplast membrane | 4.42E-03 |
| 20 | GO:0010319: stromule | 5.21E-03 |
| 21 | GO:0009707: chloroplast outer membrane | 6.77E-03 |
| 22 | GO:0005783: endoplasmic reticulum | 4.95E-02 |