co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0051553: flavone biosynthetic process	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0008219: cell death	1.17E-07
5	GO:0006468: protein phosphorylation	5.76E-07
6	GO:0031348: negative regulation of defense response	4.83E-06
7	GO:0042742: defense response to bacterium	1.06E-05
8	GO:0043069: negative regulation of programmed cell death	1.98E-05
9	GO:0010150: leaf senescence	2.00E-05
10	GO:0048194: Golgi vesicle budding	2.55E-05
11	GO:0060548: negative regulation of cell death	4.61E-05
12	GO:0006499: N-terminal protein myristoylation	7.81E-05
13	GO:0035344: hypoxanthine transport	2.60E-04
14	GO:0055081: anion homeostasis	2.60E-04
15	GO:0071366: cellular response to indolebutyric acid stimulus	2.60E-04
16	GO:0043985: histone H4-R3 methylation	2.60E-04
17	GO:0002143: tRNA wobble position uridine thiolation	2.60E-04
18	GO:0006643: membrane lipid metabolic process	2.60E-04
19	GO:0098721: uracil import across plasma membrane	2.60E-04
20	GO:0042759: long-chain fatty acid biosynthetic process	2.60E-04
21	GO:0098702: adenine import across plasma membrane	2.60E-04
22	GO:0098710: guanine import across plasma membrane	2.60E-04
23	GO:0048482: plant ovule morphogenesis	2.60E-04
24	GO:0010941: regulation of cell death	2.60E-04
25	GO:0009627: systemic acquired resistance	5.54E-04
26	GO:0006212: uracil catabolic process	5.74E-04
27	GO:0019483: beta-alanine biosynthetic process	5.74E-04
28	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.74E-04
29	GO:0060151: peroxisome localization	5.74E-04
30	GO:0019441: tryptophan catabolic process to kynurenine	5.74E-04
31	GO:0051645: Golgi localization	5.74E-04
32	GO:0010200: response to chitin	6.46E-04
33	GO:0010102: lateral root morphogenesis	7.57E-04
34	GO:0055046: microgametogenesis	7.57E-04
35	GO:0070475: rRNA base methylation	9.31E-04
36	GO:0042344: indole glucosinolate catabolic process	9.31E-04
37	GO:0010498: proteasomal protein catabolic process	9.31E-04
38	GO:0051646: mitochondrion localization	9.31E-04
39	GO:1900140: regulation of seedling development	9.31E-04
40	GO:0090436: leaf pavement cell development	9.31E-04
41	GO:0046621: negative regulation of organ growth	9.31E-04
42	GO:0048281: inflorescence morphogenesis	9.31E-04
43	GO:0070588: calcium ion transmembrane transport	9.50E-04
44	GO:0006952: defense response	1.05E-03
45	GO:0009399: nitrogen fixation	1.33E-03
46	GO:0072583: clathrin-dependent endocytosis	1.33E-03
47	GO:0002679: respiratory burst involved in defense response	1.33E-03
48	GO:0046513: ceramide biosynthetic process	1.33E-03
49	GO:0070301: cellular response to hydrogen peroxide	1.33E-03
50	GO:0002239: response to oomycetes	1.33E-03
51	GO:0009617: response to bacterium	1.39E-03
52	GO:0006508: proteolysis	1.51E-03
53	GO:0044804: nucleophagy	1.78E-03
54	GO:0006542: glutamine biosynthetic process	1.78E-03
55	GO:0048015: phosphatidylinositol-mediated signaling	2.27E-03
56	GO:0000422: mitophagy	2.27E-03
57	GO:0006564: L-serine biosynthetic process	2.27E-03
58	GO:0031365: N-terminal protein amino acid modification	2.27E-03
59	GO:0007029: endoplasmic reticulum organization	2.27E-03
60	GO:0018344: protein geranylgeranylation	2.27E-03
61	GO:0030308: negative regulation of cell growth	2.27E-03
62	GO:0009620: response to fungus	2.53E-03
63	GO:0000045: autophagosome assembly	2.80E-03
64	GO:1900425: negative regulation of defense response to bacterium	2.80E-03
65	GO:0009117: nucleotide metabolic process	2.80E-03
66	GO:0002238: response to molecule of fungal origin	2.80E-03
67	GO:0015691: cadmium ion transport	2.80E-03
68	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.80E-03
69	GO:0048317: seed morphogenesis	2.80E-03
70	GO:0002229: defense response to oomycetes	2.83E-03
71	GO:0009742: brassinosteroid mediated signaling pathway	3.05E-03
72	GO:0030163: protein catabolic process	3.22E-03
73	GO:0000911: cytokinesis by cell plate formation	3.36E-03
74	GO:0009612: response to mechanical stimulus	3.36E-03
75	GO:0006904: vesicle docking involved in exocytosis	3.64E-03
76	GO:0070370: cellular heat acclimation	3.97E-03
77	GO:0010044: response to aluminum ion	3.97E-03
78	GO:0046470: phosphatidylcholine metabolic process	3.97E-03
79	GO:0043090: amino acid import	3.97E-03
80	GO:0009607: response to biotic stimulus	4.32E-03
81	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.60E-03
82	GO:0009819: drought recovery	4.60E-03
83	GO:1900150: regulation of defense response to fungus	4.60E-03
84	GO:0032875: regulation of DNA endoreduplication	4.60E-03
85	GO:0006367: transcription initiation from RNA polymerase II promoter	5.27E-03
86	GO:0043562: cellular response to nitrogen levels	5.27E-03
87	GO:0006303: double-strand break repair via nonhomologous end joining	5.27E-03
88	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.27E-03
89	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.27E-03
90	GO:0009817: defense response to fungus, incompatible interaction	5.32E-03
91	GO:0009813: flavonoid biosynthetic process	5.59E-03
92	GO:0009821: alkaloid biosynthetic process	5.98E-03
93	GO:0051865: protein autoubiquitination	5.98E-03
94	GO:0010112: regulation of systemic acquired resistance	5.98E-03
95	GO:0007338: single fertilization	5.98E-03
96	GO:0048268: clathrin coat assembly	6.71E-03
97	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.71E-03
98	GO:0008202: steroid metabolic process	6.71E-03
99	GO:0000723: telomere maintenance	6.71E-03
100	GO:0006995: cellular response to nitrogen starvation	7.47E-03
101	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.47E-03
102	GO:0010629: negative regulation of gene expression	7.47E-03
103	GO:0006887: exocytosis	8.02E-03
104	GO:0006897: endocytosis	8.02E-03
105	GO:0009682: induced systemic resistance	8.27E-03
106	GO:0052544: defense response by callose deposition in cell wall	8.27E-03
107	GO:0072593: reactive oxygen species metabolic process	8.27E-03
108	GO:0048229: gametophyte development	8.27E-03
109	GO:0030148: sphingolipid biosynthetic process	8.27E-03
110	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.09E-03
111	GO:0071365: cellular response to auxin stimulus	9.09E-03
112	GO:0000266: mitochondrial fission	9.09E-03
113	GO:0030048: actin filament-based movement	9.94E-03
114	GO:0006807: nitrogen compound metabolic process	9.94E-03
115	GO:0031347: regulation of defense response	1.06E-02
116	GO:0050832: defense response to fungus	1.07E-02
117	GO:0002237: response to molecule of bacterial origin	1.08E-02
118	GO:0048467: gynoecium development	1.08E-02
119	GO:0034605: cellular response to heat	1.08E-02
120	GO:0010030: positive regulation of seed germination	1.17E-02
121	GO:0046854: phosphatidylinositol phosphorylation	1.17E-02
122	GO:0009863: salicylic acid mediated signaling pathway	1.36E-02
123	GO:0080147: root hair cell development	1.36E-02
124	GO:2000377: regulation of reactive oxygen species metabolic process	1.36E-02
125	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.36E-02
126	GO:0046777: protein autophosphorylation	1.42E-02
127	GO:0006874: cellular calcium ion homeostasis	1.46E-02
128	GO:0009626: plant-type hypersensitive response	1.48E-02
129	GO:0031408: oxylipin biosynthetic process	1.56E-02
130	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.67E-02
131	GO:0071456: cellular response to hypoxia	1.67E-02
132	GO:0009625: response to insect	1.77E-02
133	GO:0010227: floral organ abscission	1.77E-02
134	GO:0006012: galactose metabolic process	1.77E-02
135	GO:0009561: megagametogenesis	1.88E-02
136	GO:0010584: pollen exine formation	1.88E-02
137	GO:0042147: retrograde transport, endosome to Golgi	1.99E-02
138	GO:0016042: lipid catabolic process	2.06E-02
139	GO:0009751: response to salicylic acid	2.10E-02
140	GO:0042631: cellular response to water deprivation	2.11E-02
141	GO:0008360: regulation of cell shape	2.22E-02
142	GO:0010197: polar nucleus fusion	2.22E-02
143	GO:0046323: glucose import	2.22E-02
144	GO:0048544: recognition of pollen	2.34E-02
145	GO:0061025: membrane fusion	2.34E-02
146	GO:0010183: pollen tube guidance	2.46E-02
147	GO:0006623: protein targeting to vacuole	2.46E-02
148	GO:0000302: response to reactive oxygen species	2.58E-02
149	GO:0006891: intra-Golgi vesicle-mediated transport	2.58E-02
150	GO:0007264: small GTPase mediated signal transduction	2.70E-02
151	GO:0010090: trichome morphogenesis	2.83E-02
152	GO:1901657: glycosyl compound metabolic process	2.83E-02
153	GO:0045490: pectin catabolic process	2.90E-02
154	GO:0006310: DNA recombination	2.96E-02
155	GO:0009567: double fertilization forming a zygote and endosperm	2.96E-02
156	GO:0051607: defense response to virus	3.22E-02
157	GO:0006470: protein dephosphorylation	3.32E-02
158	GO:0007166: cell surface receptor signaling pathway	3.32E-02
159	GO:0001666: response to hypoxia	3.35E-02
160	GO:0009615: response to virus	3.35E-02
161	GO:0009816: defense response to bacterium, incompatible interaction	3.49E-02
162	GO:0042128: nitrate assimilation	3.63E-02
163	GO:0006888: ER to Golgi vesicle-mediated transport	3.77E-02
164	GO:0016049: cell growth	3.91E-02
165	GO:0009738: abscisic acid-activated signaling pathway	4.18E-02
166	GO:0010311: lateral root formation	4.20E-02
167	GO:0048767: root hair elongation	4.20E-02
168	GO:0010119: regulation of stomatal movement	4.49E-02
169	GO:0006865: amino acid transport	4.64E-02
170	GO:0006099: tricarboxylic acid cycle	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0033746: histone demethylase activity (H3-R2 specific)	0.00E+00
2	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
3	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
4	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
5	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
6	GO:0033749: histone demethylase activity (H4-R3 specific)	0.00E+00
7	GO:0016504: peptidase activator activity	0.00E+00
8	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
9	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
10	GO:0033759: flavone synthase activity	0.00E+00
11	GO:0015370: solute:sodium symporter activity	0.00E+00
12	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
13	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
14	GO:0003837: beta-ureidopropionase activity	0.00E+00
15	GO:0070577: lysine-acetylated histone binding	0.00E+00
16	GO:0005524: ATP binding	1.30E-08
17	GO:0004012: phospholipid-translocating ATPase activity	2.26E-06
18	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.53E-06
19	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.96E-05
20	GO:0004190: aspartic-type endopeptidase activity	5.79E-05
21	GO:0016301: kinase activity	7.34E-05
22	GO:0004674: protein serine/threonine kinase activity	7.84E-05
23	GO:0033612: receptor serine/threonine kinase binding	1.09E-04
24	GO:0005516: calmodulin binding	1.23E-04
25	GO:0015294: solute:cation symporter activity	2.60E-04
26	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.60E-04
27	GO:0015207: adenine transmembrane transporter activity	2.60E-04
28	GO:0015168: glycerol transmembrane transporter activity	2.60E-04
29	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.60E-04
30	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.60E-04
31	GO:0032050: clathrin heavy chain binding	2.60E-04
32	GO:0016303: 1-phosphatidylinositol-3-kinase activity	2.60E-04
33	GO:0015208: guanine transmembrane transporter activity	2.60E-04
34	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.02E-04
35	GO:0004630: phospholipase D activity	3.02E-04
36	GO:0004713: protein tyrosine kinase activity	5.06E-04
37	GO:0005515: protein binding	5.73E-04
38	GO:0032934: sterol binding	5.74E-04
39	GO:0045140: inositol phosphoceramide synthase activity	5.74E-04
40	GO:0030742: GTP-dependent protein binding	5.74E-04
41	GO:0004061: arylformamidase activity	5.74E-04
42	GO:0004385: guanylate kinase activity	5.74E-04
43	GO:0004566: beta-glucuronidase activity	5.74E-04
44	GO:0050291: sphingosine N-acyltransferase activity	5.74E-04
45	GO:0004672: protein kinase activity	7.31E-04
46	GO:0005388: calcium-transporting ATPase activity	7.57E-04
47	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.08E-04
48	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.31E-04
49	GO:0004663: Rab geranylgeranyltransferase activity	9.31E-04
50	GO:0016595: glutamate binding	9.31E-04
51	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	9.31E-04
52	GO:0015086: cadmium ion transmembrane transporter activity	1.33E-03
53	GO:0004792: thiosulfate sulfurtransferase activity	1.33E-03
54	GO:0005354: galactose transmembrane transporter activity	1.33E-03
55	GO:0070628: proteasome binding	1.78E-03
56	GO:0015204: urea transmembrane transporter activity	1.78E-03
57	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.78E-03
58	GO:0015210: uracil transmembrane transporter activity	1.78E-03
59	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.27E-03
60	GO:0017137: Rab GTPase binding	2.27E-03
61	GO:0005496: steroid binding	2.27E-03
62	GO:0004356: glutamate-ammonia ligase activity	2.27E-03
63	GO:0045431: flavonol synthase activity	2.27E-03
64	GO:0015145: monosaccharide transmembrane transporter activity	2.27E-03
65	GO:0008641: small protein activating enzyme activity	2.27E-03
66	GO:0004602: glutathione peroxidase activity	3.36E-03
67	GO:0004656: procollagen-proline 4-dioxygenase activity	3.36E-03
68	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.36E-03
69	GO:0004620: phospholipase activity	3.97E-03
70	GO:0008235: metalloexopeptidase activity	3.97E-03
71	GO:0042162: telomeric DNA binding	3.97E-03
72	GO:0052747: sinapyl alcohol dehydrogenase activity	4.60E-03
73	GO:0004034: aldose 1-epimerase activity	4.60E-03
74	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.06E-03
75	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.20E-03
76	GO:0008173: RNA methyltransferase activity	5.27E-03
77	GO:0008142: oxysterol binding	5.27E-03
78	GO:0003843: 1,3-beta-D-glucan synthase activity	5.27E-03
79	GO:0004003: ATP-dependent DNA helicase activity	5.98E-03
80	GO:0071949: FAD binding	5.98E-03
81	GO:0016844: strictosidine synthase activity	6.71E-03
82	GO:0005545: 1-phosphatidylinositol binding	7.47E-03
83	GO:0004177: aminopeptidase activity	8.27E-03
84	GO:0047372: acylglycerol lipase activity	8.27E-03
85	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.09E-03
86	GO:0000287: magnesium ion binding	9.68E-03
87	GO:0005198: structural molecule activity	9.79E-03
88	GO:0015293: symporter activity	9.79E-03
89	GO:0003774: motor activity	1.08E-02
90	GO:0005217: intracellular ligand-gated ion channel activity	1.17E-02
91	GO:0004970: ionotropic glutamate receptor activity	1.17E-02
92	GO:0031418: L-ascorbic acid binding	1.36E-02
93	GO:0003954: NADH dehydrogenase activity	1.36E-02
94	GO:0043130: ubiquitin binding	1.36E-02
95	GO:0030276: clathrin binding	2.22E-02
96	GO:0005355: glucose transmembrane transporter activity	2.34E-02
97	GO:0010181: FMN binding	2.34E-02
98	GO:0016853: isomerase activity	2.34E-02
99	GO:0015144: carbohydrate transmembrane transporter activity	2.52E-02
100	GO:0005351: sugar:proton symporter activity	2.84E-02
101	GO:0003684: damaged DNA binding	2.96E-02
102	GO:0005509: calcium ion binding	3.13E-02
103	GO:0051213: dioxygenase activity	3.35E-02
104	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.63E-02
105	GO:0004683: calmodulin-dependent protein kinase activity	3.77E-02
106	GO:0102483: scopolin beta-glucosidase activity	3.77E-02
107	GO:0005096: GTPase activator activity	4.20E-02
108	GO:0046982: protein heterodimerization activity	4.39E-02
109	GO:0043531: ADP binding	4.90E-02
110	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005942: phosphatidylinositol 3-kinase complex	0.00E+00
3	GO:0005886: plasma membrane	7.93E-10
4	GO:0016021: integral component of membrane	3.61E-06
5	GO:0045252: oxoglutarate dehydrogenase complex	2.60E-04
6	GO:0043564: Ku70:Ku80 complex	2.60E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	5.74E-04
8	GO:0005794: Golgi apparatus	6.48E-04
9	GO:0070062: extracellular exosome	1.33E-03
10	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.33E-03
11	GO:0000407: pre-autophagosomal structure	1.78E-03
12	GO:0005802: trans-Golgi network	2.16E-03
13	GO:0030126: COPI vesicle coat	2.27E-03
14	GO:0009504: cell plate	2.64E-03
15	GO:0016020: membrane	2.73E-03
16	GO:0000145: exocyst	3.02E-03
17	GO:0005783: endoplasmic reticulum	5.07E-03
18	GO:0000148: 1,3-beta-D-glucan synthase complex	5.27E-03
19	GO:0000784: nuclear chromosome, telomeric region	5.27E-03
20	GO:0030125: clathrin vesicle coat	7.47E-03
21	GO:0017119: Golgi transport complex	7.47E-03
22	GO:0016459: myosin complex	7.47E-03
23	GO:0005789: endoplasmic reticulum membrane	7.88E-03
24	GO:0005887: integral component of plasma membrane	8.24E-03
25	GO:0005765: lysosomal membrane	8.27E-03
26	GO:0048471: perinuclear region of cytoplasm	8.27E-03
27	GO:0043234: protein complex	1.27E-02
28	GO:0005829: cytosol	1.42E-02
29	GO:0010008: endosome membrane	1.44E-02
30	GO:0005905: clathrin-coated pit	1.56E-02
31	GO:0005839: proteasome core complex	1.56E-02
32	GO:0031410: cytoplasmic vesicle	1.67E-02
33	GO:0030136: clathrin-coated vesicle	1.99E-02
34	GO:0019898: extrinsic component of membrane	2.46E-02
35	GO:0071944: cell periphery	2.83E-02
36	GO:0005768: endosome	3.02E-02
37	GO:0000151: ubiquitin ligase complex	4.05E-02
38	GO:0000786: nucleosome	4.64E-02