Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G56670

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006412: translation1.46E-140
2GO:0042254: ribosome biogenesis1.73E-60
3GO:0000027: ribosomal large subunit assembly3.15E-13
4GO:0009967: positive regulation of signal transduction1.05E-06
5GO:0000028: ribosomal small subunit assembly1.31E-06
6GO:0009735: response to cytokinin1.35E-06
7GO:0002181: cytoplasmic translation3.92E-06
8GO:0009955: adaxial/abaxial pattern specification5.87E-05
9GO:0006407: rRNA export from nucleus1.46E-04
10GO:0030490: maturation of SSU-rRNA1.46E-04
11GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.46E-04
12GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.46E-04
13GO:0009965: leaf morphogenesis5.19E-04
14GO:0010476: gibberellin mediated signaling pathway5.47E-04
15GO:0042256: mature ribosome assembly5.47E-04
16GO:0090506: axillary shoot meristem initiation5.47E-04
17GO:0071215: cellular response to abscisic acid stimulus7.64E-04
18GO:0070301: cellular response to hydrogen peroxide7.83E-04
19GO:0006241: CTP biosynthetic process7.83E-04
20GO:0006165: nucleoside diphosphate phosphorylation7.83E-04
21GO:0006228: UTP biosynthetic process7.83E-04
22GO:0044205: 'de novo' UMP biosynthetic process1.04E-03
23GO:2000032: regulation of secondary shoot formation1.04E-03
24GO:0006183: GTP biosynthetic process1.04E-03
25GO:0009409: response to cold1.20E-03
26GO:0071493: cellular response to UV-B1.31E-03
27GO:0006414: translational elongation1.55E-03
28GO:0000911: cytokinesis by cell plate formation1.93E-03
29GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.27E-03
30GO:0006526: arginine biosynthetic process3.00E-03
31GO:0006002: fructose 6-phosphate metabolic process3.00E-03
32GO:0008283: cell proliferation3.83E-03
33GO:0009644: response to high light intensity4.14E-03
34GO:0010015: root morphogenesis4.67E-03
35GO:0006913: nucleocytoplasmic transport4.67E-03
36GO:0010229: inflorescence development5.60E-03
37GO:0010102: lateral root morphogenesis5.60E-03
38GO:0006417: regulation of translation5.70E-03
39GO:0046686: response to cadmium ion5.76E-03
40GO:0006541: glutamine metabolic process6.09E-03
41GO:0015992: proton transport8.73E-03
42GO:0009845: seed germination9.93E-03
43GO:0009749: response to glucose1.37E-02
44GO:0009791: post-embryonic development1.37E-02
45GO:0032502: developmental process1.50E-02
46GO:0007264: small GTPase mediated signal transduction1.50E-02
47GO:0010090: trichome morphogenesis1.57E-02
48GO:0010252: auxin homeostasis1.64E-02
49GO:0009651: response to salt stress2.16E-02
50GO:0006499: N-terminal protein myristoylation2.41E-02
51GO:0010043: response to zinc ion2.49E-02
52GO:0009793: embryo development ending in seed dormancy3.57E-02
53GO:0006096: glycolytic process4.44E-02
54GO:0048367: shoot system development4.54E-02
55GO:0009620: response to fungus4.75E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome1.01E-171
2GO:0003729: mRNA binding1.11E-35
3GO:0019843: rRNA binding1.25E-14
4GO:0005078: MAP-kinase scaffold activity1.05E-06
5GO:0008097: 5S rRNA binding9.15E-06
6GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1.46E-04
7GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity5.47E-04
8GO:0032947: protein complex scaffold5.47E-04
9GO:0070181: small ribosomal subunit rRNA binding5.47E-04
10GO:0004550: nucleoside diphosphate kinase activity7.83E-04
11GO:0016004: phospholipase activator activity1.04E-03
12GO:0003872: 6-phosphofructokinase activity2.27E-03
13GO:0003746: translation elongation factor activity2.66E-02
14GO:0004871: signal transducer activity3.06E-02
15GO:0003723: RNA binding3.58E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome1.43E-125
2GO:0022625: cytosolic large ribosomal subunit3.84E-119
3GO:0005840: ribosome1.68E-105
4GO:0022627: cytosolic small ribosomal subunit9.67E-49
5GO:0005737: cytoplasm2.90E-45
6GO:0005730: nucleolus2.16E-36
7GO:0005829: cytosol1.56E-33
8GO:0009506: plasmodesma7.07E-30
9GO:0015934: large ribosomal subunit5.94E-24
10GO:0016020: membrane9.49E-18
11GO:0005774: vacuolar membrane4.59E-17
12GO:0005773: vacuole4.56E-13
13GO:0005618: cell wall5.35E-11
14GO:0015935: small ribosomal subunit8.70E-11
15GO:0005886: plasma membrane1.12E-06
16GO:0009507: chloroplast9.03E-06
17GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex1.46E-04
18GO:0005951: carbamoyl-phosphate synthase complex1.46E-04
19GO:0030686: 90S preribosome1.46E-04
20GO:0005853: eukaryotic translation elongation factor 1 complex5.47E-04
21GO:0005682: U5 snRNP1.04E-03
22GO:0005687: U4 snRNP1.31E-03
23GO:0071004: U2-type prespliceosome2.63E-03
24GO:0046540: U4/U6 x U5 tri-snRNP complex3.00E-03
25GO:0005685: U1 snRNP3.40E-03
26GO:0015030: Cajal body3.81E-03
27GO:0005686: U2 snRNP4.23E-03
28GO:0071013: catalytic step 2 spliceosome4.67E-03
29GO:0019013: viral nucleocapsid5.60E-03
30GO:0005622: intracellular8.42E-03
31GO:0005834: heterotrimeric G-protein complex4.65E-02
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Gene type



Gene DE type