GO Enrichment Analysis of Co-expressed Genes with
AT5G56260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 2 | GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation | 0.00E+00 |
| 3 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 4 | GO:0072660: maintenance of protein location in plasma membrane | 0.00E+00 |
| 5 | GO:0006457: protein folding | 4.65E-08 |
| 6 | GO:0031349: positive regulation of defense response | 5.31E-07 |
| 7 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 5.31E-07 |
| 8 | GO:0015696: ammonium transport | 4.78E-06 |
| 9 | GO:0072488: ammonium transmembrane transport | 9.05E-06 |
| 10 | GO:0009863: salicylic acid mediated signaling pathway | 9.75E-06 |
| 11 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 3.24E-05 |
| 12 | GO:0006886: intracellular protein transport | 6.68E-05 |
| 13 | GO:0009408: response to heat | 9.80E-05 |
| 14 | GO:0060862: negative regulation of floral organ abscission | 1.00E-04 |
| 15 | GO:0051245: negative regulation of cellular defense response | 1.00E-04 |
| 16 | GO:0009867: jasmonic acid mediated signaling pathway | 1.61E-04 |
| 17 | GO:0006626: protein targeting to mitochondrion | 2.03E-04 |
| 18 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.36E-04 |
| 19 | GO:0051258: protein polymerization | 2.36E-04 |
| 20 | GO:0002221: pattern recognition receptor signaling pathway | 2.36E-04 |
| 21 | GO:0015709: thiosulfate transport | 2.36E-04 |
| 22 | GO:0031204: posttranslational protein targeting to membrane, translocation | 2.36E-04 |
| 23 | GO:0071422: succinate transmembrane transport | 2.36E-04 |
| 24 | GO:0080181: lateral root branching | 2.36E-04 |
| 25 | GO:0055074: calcium ion homeostasis | 3.92E-04 |
| 26 | GO:1900140: regulation of seedling development | 3.92E-04 |
| 27 | GO:0072661: protein targeting to plasma membrane | 3.92E-04 |
| 28 | GO:0045039: protein import into mitochondrial inner membrane | 3.92E-04 |
| 29 | GO:0015695: organic cation transport | 3.92E-04 |
| 30 | GO:0016998: cell wall macromolecule catabolic process | 3.94E-04 |
| 31 | GO:0015992: proton transport | 3.94E-04 |
| 32 | GO:0009626: plant-type hypersensitive response | 4.61E-04 |
| 33 | GO:0006468: protein phosphorylation | 4.80E-04 |
| 34 | GO:0045454: cell redox homeostasis | 4.99E-04 |
| 35 | GO:0010148: transpiration | 5.64E-04 |
| 36 | GO:0033014: tetrapyrrole biosynthetic process | 5.64E-04 |
| 37 | GO:0006612: protein targeting to membrane | 5.64E-04 |
| 38 | GO:0000187: activation of MAPK activity | 5.64E-04 |
| 39 | GO:0015729: oxaloacetate transport | 5.64E-04 |
| 40 | GO:0072334: UDP-galactose transmembrane transport | 5.64E-04 |
| 41 | GO:0006662: glycerol ether metabolic process | 6.40E-04 |
| 42 | GO:0000460: maturation of 5.8S rRNA | 7.50E-04 |
| 43 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 7.50E-04 |
| 44 | GO:0010188: response to microbial phytotoxin | 7.50E-04 |
| 45 | GO:0080142: regulation of salicylic acid biosynthetic process | 7.50E-04 |
| 46 | GO:0060548: negative regulation of cell death | 7.50E-04 |
| 47 | GO:0010363: regulation of plant-type hypersensitive response | 7.50E-04 |
| 48 | GO:0071423: malate transmembrane transport | 9.47E-04 |
| 49 | GO:0046283: anthocyanin-containing compound metabolic process | 9.47E-04 |
| 50 | GO:0006465: signal peptide processing | 9.47E-04 |
| 51 | GO:0006979: response to oxidative stress | 1.09E-03 |
| 52 | GO:0009615: response to virus | 1.11E-03 |
| 53 | GO:0035435: phosphate ion transmembrane transport | 1.16E-03 |
| 54 | GO:0060918: auxin transport | 1.16E-03 |
| 55 | GO:0045040: protein import into mitochondrial outer membrane | 1.16E-03 |
| 56 | GO:0010942: positive regulation of cell death | 1.16E-03 |
| 57 | GO:0000470: maturation of LSU-rRNA | 1.16E-03 |
| 58 | GO:0043248: proteasome assembly | 1.16E-03 |
| 59 | GO:0009617: response to bacterium | 1.32E-03 |
| 60 | GO:0008219: cell death | 1.44E-03 |
| 61 | GO:0008272: sulfate transport | 1.62E-03 |
| 62 | GO:0015031: protein transport | 1.64E-03 |
| 63 | GO:0045087: innate immune response | 1.81E-03 |
| 64 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.87E-03 |
| 65 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.87E-03 |
| 66 | GO:0006605: protein targeting | 1.87E-03 |
| 67 | GO:0034599: cellular response to oxidative stress | 1.89E-03 |
| 68 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.14E-03 |
| 69 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.14E-03 |
| 70 | GO:0009699: phenylpropanoid biosynthetic process | 2.14E-03 |
| 71 | GO:0046686: response to cadmium ion | 2.34E-03 |
| 72 | GO:0080167: response to karrikin | 2.40E-03 |
| 73 | GO:0006783: heme biosynthetic process | 2.41E-03 |
| 74 | GO:0016192: vesicle-mediated transport | 2.55E-03 |
| 75 | GO:0000103: sulfate assimilation | 3.00E-03 |
| 76 | GO:0006032: chitin catabolic process | 3.00E-03 |
| 77 | GO:0043069: negative regulation of programmed cell death | 3.00E-03 |
| 78 | GO:0072593: reactive oxygen species metabolic process | 3.31E-03 |
| 79 | GO:0016925: protein sumoylation | 3.63E-03 |
| 80 | GO:0071365: cellular response to auxin stimulus | 3.63E-03 |
| 81 | GO:0002237: response to molecule of bacterial origin | 4.30E-03 |
| 82 | GO:0042343: indole glucosinolate metabolic process | 4.64E-03 |
| 83 | GO:0042742: defense response to bacterium | 4.73E-03 |
| 84 | GO:0034976: response to endoplasmic reticulum stress | 5.00E-03 |
| 85 | GO:0010187: negative regulation of seed germination | 5.37E-03 |
| 86 | GO:0080147: root hair cell development | 5.37E-03 |
| 87 | GO:0098542: defense response to other organism | 6.14E-03 |
| 88 | GO:0048278: vesicle docking | 6.14E-03 |
| 89 | GO:0009814: defense response, incompatible interaction | 6.54E-03 |
| 90 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.54E-03 |
| 91 | GO:0031348: negative regulation of defense response | 6.54E-03 |
| 92 | GO:0009411: response to UV | 6.94E-03 |
| 93 | GO:0050832: defense response to fungus | 7.24E-03 |
| 94 | GO:0009306: protein secretion | 7.35E-03 |
| 95 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 7.78E-03 |
| 96 | GO:0010051: xylem and phloem pattern formation | 8.21E-03 |
| 97 | GO:0010197: polar nucleus fusion | 8.65E-03 |
| 98 | GO:0007166: cell surface receptor signaling pathway | 8.71E-03 |
| 99 | GO:0061025: membrane fusion | 9.10E-03 |
| 100 | GO:0006623: protein targeting to vacuole | 9.56E-03 |
| 101 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.00E-02 |
| 102 | GO:0030163: protein catabolic process | 1.10E-02 |
| 103 | GO:0006906: vesicle fusion | 1.40E-02 |
| 104 | GO:0015995: chlorophyll biosynthetic process | 1.46E-02 |
| 105 | GO:0009737: response to abscisic acid | 1.48E-02 |
| 106 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.52E-02 |
| 107 | GO:0046777: protein autophosphorylation | 1.57E-02 |
| 108 | GO:0010311: lateral root formation | 1.62E-02 |
| 109 | GO:0006499: N-terminal protein myristoylation | 1.68E-02 |
| 110 | GO:0009631: cold acclimation | 1.74E-02 |
| 111 | GO:0010119: regulation of stomatal movement | 1.74E-02 |
| 112 | GO:0006099: tricarboxylic acid cycle | 1.91E-02 |
| 113 | GO:0006839: mitochondrial transport | 2.03E-02 |
| 114 | GO:0006887: exocytosis | 2.10E-02 |
| 115 | GO:0006952: defense response | 2.12E-02 |
| 116 | GO:0000165: MAPK cascade | 2.55E-02 |
| 117 | GO:0009651: response to salt stress | 2.91E-02 |
| 118 | GO:0009909: regulation of flower development | 2.95E-02 |
| 119 | GO:0006810: transport | 3.21E-02 |
| 120 | GO:0009620: response to fungus | 3.31E-02 |
| 121 | GO:0009553: embryo sac development | 3.46E-02 |
| 122 | GO:0009624: response to nematode | 3.53E-02 |
| 123 | GO:0055114: oxidation-reduction process | 3.60E-02 |
| 124 | GO:0018105: peptidyl-serine phosphorylation | 3.61E-02 |
| 125 | GO:0009742: brassinosteroid mediated signaling pathway | 3.68E-02 |
| 126 | GO:0035556: intracellular signal transduction | 4.05E-02 |
| 127 | GO:0009845: seed germination | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | 0.00E+00 |
| 2 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 3 | GO:0052873: FMN reductase (NADPH) activity | 0.00E+00 |
| 4 | GO:0008752: FMN reductase activity | 0.00E+00 |
| 5 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 6 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 7 | GO:0051082: unfolded protein binding | 2.20E-06 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.43E-06 |
| 9 | GO:0008519: ammonium transmembrane transporter activity | 2.28E-05 |
| 10 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 5.73E-05 |
| 11 | GO:0005524: ATP binding | 6.61E-05 |
| 12 | GO:0008565: protein transporter activity | 9.88E-05 |
| 13 | GO:0004325: ferrochelatase activity | 1.00E-04 |
| 14 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 1.00E-04 |
| 15 | GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity | 1.00E-04 |
| 16 | GO:0048037: cofactor binding | 1.00E-04 |
| 17 | GO:0005509: calcium ion binding | 1.90E-04 |
| 18 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.36E-04 |
| 19 | GO:0015117: thiosulfate transmembrane transporter activity | 2.36E-04 |
| 20 | GO:1901677: phosphate transmembrane transporter activity | 2.36E-04 |
| 21 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.36E-04 |
| 22 | GO:0043021: ribonucleoprotein complex binding | 2.36E-04 |
| 23 | GO:0015141: succinate transmembrane transporter activity | 3.92E-04 |
| 24 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.92E-04 |
| 25 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 3.92E-04 |
| 26 | GO:0047134: protein-disulfide reductase activity | 5.51E-04 |
| 27 | GO:0015035: protein disulfide oxidoreductase activity | 5.57E-04 |
| 28 | GO:0015131: oxaloacetate transmembrane transporter activity | 5.64E-04 |
| 29 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 5.64E-04 |
| 30 | GO:0005460: UDP-glucose transmembrane transporter activity | 5.64E-04 |
| 31 | GO:0017077: oxidative phosphorylation uncoupler activity | 5.64E-04 |
| 32 | GO:0004791: thioredoxin-disulfide reductase activity | 6.86E-04 |
| 33 | GO:0043495: protein anchor | 7.50E-04 |
| 34 | GO:0005086: ARF guanyl-nucleotide exchange factor activity | 7.50E-04 |
| 35 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.87E-04 |
| 36 | GO:0031386: protein tag | 9.47E-04 |
| 37 | GO:0002020: protease binding | 9.47E-04 |
| 38 | GO:0005459: UDP-galactose transmembrane transporter activity | 9.47E-04 |
| 39 | GO:0008641: small protein activating enzyme activity | 9.47E-04 |
| 40 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.16E-03 |
| 41 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.38E-03 |
| 42 | GO:0015140: malate transmembrane transporter activity | 1.62E-03 |
| 43 | GO:0008320: protein transmembrane transporter activity | 1.62E-03 |
| 44 | GO:0004427: inorganic diphosphatase activity | 1.62E-03 |
| 45 | GO:0004674: protein serine/threonine kinase activity | 1.70E-03 |
| 46 | GO:0004708: MAP kinase kinase activity | 1.87E-03 |
| 47 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 2.70E-03 |
| 48 | GO:0004713: protein tyrosine kinase activity | 3.00E-03 |
| 49 | GO:0004568: chitinase activity | 3.00E-03 |
| 50 | GO:0016301: kinase activity | 3.56E-03 |
| 51 | GO:0015116: sulfate transmembrane transporter activity | 3.63E-03 |
| 52 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.95E-03 |
| 53 | GO:0031072: heat shock protein binding | 3.95E-03 |
| 54 | GO:0008061: chitin binding | 4.64E-03 |
| 55 | GO:0004707: MAP kinase activity | 6.14E-03 |
| 56 | GO:0033612: receptor serine/threonine kinase binding | 6.14E-03 |
| 57 | GO:0016887: ATPase activity | 6.83E-03 |
| 58 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 7.10E-03 |
| 59 | GO:0003756: protein disulfide isomerase activity | 7.35E-03 |
| 60 | GO:0000166: nucleotide binding | 8.12E-03 |
| 61 | GO:0004672: protein kinase activity | 8.46E-03 |
| 62 | GO:0030276: clathrin binding | 8.65E-03 |
| 63 | GO:0010181: FMN binding | 9.10E-03 |
| 64 | GO:0030246: carbohydrate binding | 1.18E-02 |
| 65 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.20E-02 |
| 66 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.40E-02 |
| 67 | GO:0004683: calmodulin-dependent protein kinase activity | 1.46E-02 |
| 68 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.46E-02 |
| 69 | GO:0004222: metalloendopeptidase activity | 1.68E-02 |
| 70 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.74E-02 |
| 71 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.86E-02 |
| 72 | GO:0000149: SNARE binding | 1.97E-02 |
| 73 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.97E-02 |
| 74 | GO:0005484: SNAP receptor activity | 2.22E-02 |
| 75 | GO:0003824: catalytic activity | 2.23E-02 |
| 76 | GO:0009055: electron carrier activity | 2.33E-02 |
| 77 | GO:0016298: lipase activity | 2.81E-02 |
| 78 | GO:0031625: ubiquitin protein ligase binding | 2.95E-02 |
| 79 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.31E-02 |
| 80 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.31E-02 |
| 81 | GO:0016758: transferase activity, transferring hexosyl groups | 4.06E-02 |
| 82 | GO:0005515: protein binding | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031205: endoplasmic reticulum Sec complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005784: Sec61 translocon complex | 0.00E+00 |
| 4 | GO:0005886: plasma membrane | 1.74E-10 |
| 5 | GO:0005788: endoplasmic reticulum lumen | 5.50E-08 |
| 6 | GO:0009506: plasmodesma | 2.32E-06 |
| 7 | GO:0005783: endoplasmic reticulum | 3.17E-06 |
| 8 | GO:0005829: cytosol | 9.60E-05 |
| 9 | GO:0005787: signal peptidase complex | 1.00E-04 |
| 10 | GO:0030665: clathrin-coated vesicle membrane | 1.09E-04 |
| 11 | GO:0070545: PeBoW complex | 2.36E-04 |
| 12 | GO:0005741: mitochondrial outer membrane | 3.94E-04 |
| 13 | GO:0031225: anchored component of membrane | 6.87E-04 |
| 14 | GO:0030173: integral component of Golgi membrane | 1.38E-03 |
| 15 | GO:0016363: nuclear matrix | 1.38E-03 |
| 16 | GO:0019005: SCF ubiquitin ligase complex | 1.44E-03 |
| 17 | GO:0005794: Golgi apparatus | 1.57E-03 |
| 18 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 1.62E-03 |
| 19 | GO:0030687: preribosome, large subunit precursor | 1.62E-03 |
| 20 | GO:0030131: clathrin adaptor complex | 1.87E-03 |
| 21 | GO:0005773: vacuole | 2.01E-03 |
| 22 | GO:0005742: mitochondrial outer membrane translocase complex | 2.14E-03 |
| 23 | GO:0031090: organelle membrane | 2.41E-03 |
| 24 | GO:0005774: vacuolar membrane | 2.78E-03 |
| 25 | GO:0017119: Golgi transport complex | 3.00E-03 |
| 26 | GO:0005740: mitochondrial envelope | 3.00E-03 |
| 27 | GO:0005743: mitochondrial inner membrane | 3.58E-03 |
| 28 | GO:0005618: cell wall | 3.63E-03 |
| 29 | GO:0031012: extracellular matrix | 3.95E-03 |
| 30 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.64E-03 |
| 31 | GO:0005795: Golgi stack | 4.64E-03 |
| 32 | GO:0005758: mitochondrial intermembrane space | 5.37E-03 |
| 33 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 7.35E-03 |
| 34 | GO:0009504: cell plate | 9.56E-03 |
| 35 | GO:0016592: mediator complex | 1.05E-02 |
| 36 | GO:0032580: Golgi cisterna membrane | 1.15E-02 |
| 37 | GO:0016021: integral component of membrane | 1.26E-02 |
| 38 | GO:0000932: P-body | 1.30E-02 |
| 39 | GO:0005802: trans-Golgi network | 1.48E-02 |
| 40 | GO:0000151: ubiquitin ligase complex | 1.57E-02 |
| 41 | GO:0031902: late endosome membrane | 2.10E-02 |
| 42 | GO:0031201: SNARE complex | 2.10E-02 |
| 43 | GO:0000502: proteasome complex | 2.75E-02 |
| 44 | GO:0005887: integral component of plasma membrane | 2.94E-02 |
| 45 | GO:0005834: heterotrimeric G-protein complex | 3.24E-02 |
| 46 | GO:0048046: apoplast | 3.28E-02 |
| 47 | GO:0005789: endoplasmic reticulum membrane | 3.37E-02 |
| 48 | GO:0022626: cytosolic ribosome | 3.68E-02 |
| 49 | GO:0005654: nucleoplasm | 4.06E-02 |
| 50 | GO:0005623: cell | 4.22E-02 |