Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G55860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032780: negative regulation of ATPase activity0.00E+00
2GO:0034214: protein hexamerization6.71E-06
3GO:0048508: embryonic meristem development6.71E-06
4GO:0006470: protein dephosphorylation9.11E-06
5GO:0046740: transport of virus in host, cell to cell1.83E-05
6GO:0009945: radial axis specification1.83E-05
7GO:0061158: 3'-UTR-mediated mRNA destabilization3.35E-05
8GO:0010288: response to lead ion3.35E-05
9GO:0010071: root meristem specification5.17E-05
10GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione1.20E-04
11GO:1900425: negative regulation of defense response to bacterium1.20E-04
12GO:0070814: hydrogen sulfide biosynthetic process1.20E-04
13GO:0009942: longitudinal axis specification1.46E-04
14GO:0010078: maintenance of root meristem identity2.03E-04
15GO:0010492: maintenance of shoot apical meristem identity2.03E-04
16GO:0009819: drought recovery2.03E-04
17GO:0010204: defense response signaling pathway, resistance gene-independent2.33E-04
18GO:0090333: regulation of stomatal closure2.64E-04
19GO:0046685: response to arsenic-containing substance2.64E-04
20GO:0009870: defense response signaling pathway, resistance gene-dependent3.28E-04
21GO:0000103: sulfate assimilation3.28E-04
22GO:0019538: protein metabolic process3.28E-04
23GO:0080022: primary root development8.55E-04
24GO:0002229: defense response to oomycetes1.02E-03
25GO:0051607: defense response to virus1.25E-03
26GO:0001666: response to hypoxia1.30E-03
27GO:0045087: innate immune response1.81E-03
28GO:0031347: regulation of defense response2.43E-03
29GO:0042742: defense response to bacterium2.58E-03
30GO:0008380: RNA splicing5.44E-03
31GO:0010468: regulation of gene expression5.44E-03
32GO:0006970: response to osmotic stress6.85E-03
33GO:0007049: cell cycle7.02E-03
34GO:0046777: protein autophosphorylation7.91E-03
35GO:0009651: response to salt stress8.59E-03
36GO:0006869: lipid transport9.13E-03
37GO:0006281: DNA repair9.92E-03
38GO:0006397: mRNA processing1.02E-02
39GO:0006357: regulation of transcription from RNA polymerase II promoter1.21E-02
40GO:0009738: abscisic acid-activated signaling pathway1.45E-02
41GO:0009414: response to water deprivation2.42E-02
42GO:0030154: cell differentiation2.61E-02
43GO:0009409: response to cold3.05E-02
44GO:0009737: response to abscisic acid4.22E-02
45GO:0009793: embryo development ending in seed dormancy4.47E-02
RankGO TermAdjusted P value
1GO:0042030: ATPase inhibitor activity0.00E+00
2GO:0032791: lead ion binding1.83E-05
3GO:0004722: protein serine/threonine phosphatase activity3.31E-05
4GO:0004781: sulfate adenylyltransferase (ATP) activity3.35E-05
5GO:0004416: hydroxyacylglutathione hydrolase activity5.17E-05
6GO:0000062: fatty-acyl-CoA binding7.23E-05
7GO:0042803: protein homodimerization activity6.47E-04
8GO:0003727: single-stranded RNA binding7.72E-04
9GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.20E-03
10GO:0046982: protein heterodimerization activity6.42E-03
11GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting8.56E-03
12GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding9.23E-03
13GO:0008289: lipid binding1.25E-02
14GO:0016887: ATPase activity1.35E-02
15GO:0030246: carbohydrate binding1.84E-02
16GO:0005524: ATP binding1.92E-02
17GO:0046872: metal ion binding2.39E-02
18GO:0005506: iron ion binding2.43E-02
19GO:0044212: transcription regulatory region DNA binding2.46E-02
20GO:0003824: catalytic activity2.63E-02
21GO:0005515: protein binding2.96E-02
22GO:0003729: mRNA binding3.27E-02
23GO:0016301: kinase activity4.32E-02
24GO:0003677: DNA binding4.77E-02
RankGO TermAdjusted P value
1GO:0009514: glyoxysome2.33E-04
2GO:0005778: peroxisomal membrane1.20E-03
3GO:0005635: nuclear envelope2.74E-03
4GO:0005681: spliceosomal complex2.93E-03
5GO:0005654: nucleoplasm3.80E-03
6GO:0009941: chloroplast envelope1.21E-02
7GO:0005777: peroxisome1.64E-02
8GO:0009570: chloroplast stroma1.69E-02
9GO:0009536: plastid2.84E-02
10GO:0005789: endoplasmic reticulum membrane3.33E-02
11GO:0005886: plasma membrane4.04E-02
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Gene type



Gene DE type