co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G54970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009202: deoxyribonucleoside triphosphate biosynthetic process	0.00E+00
2	GO:0006412: translation	5.11E-07
3	GO:0006260: DNA replication	7.86E-07
4	GO:0006270: DNA replication initiation	2.95E-06
5	GO:0006269: DNA replication, synthesis of RNA primer	1.49E-05
6	GO:0070828: heterochromatin organization	2.75E-05
7	GO:1902626: assembly of large subunit precursor of preribosome	2.75E-05
8	GO:0006301: postreplication repair	9.99E-05
9	GO:0006268: DNA unwinding involved in DNA replication	1.22E-04
10	GO:0009082: branched-chain amino acid biosynthetic process	1.22E-04
11	GO:0009097: isoleucine biosynthetic process	1.96E-04
12	GO:0006261: DNA-dependent DNA replication	1.96E-04
13	GO:0007062: sister chromatid cohesion	2.22E-04
14	GO:0042254: ribosome biogenesis	3.35E-04
15	GO:0000027: ribosomal large subunit assembly	4.90E-04
16	GO:0010082: regulation of root meristem growth	6.23E-04
17	GO:0042127: regulation of cell proliferation	6.58E-04
18	GO:0006342: chromatin silencing	7.65E-04
19	GO:0016032: viral process	9.12E-04
20	GO:0008283: cell proliferation	1.81E-03
21	GO:0009636: response to toxic substance	1.96E-03
22	GO:0006096: glycolytic process	2.48E-03
23	GO:0046686: response to cadmium ion	3.11E-03
24	GO:0009790: embryo development	3.63E-03
25	GO:0007049: cell cycle	5.91E-03
26	GO:0048364: root development	8.58E-03
27	GO:0051301: cell division	1.33E-02
28	GO:0006414: translational elongation	1.66E-02
29	GO:0009409: response to cold	2.56E-02

Rank	GO Term	Adjusted P value
1	GO:0003735: structural constituent of ribosome	4.59E-10
2	GO:0019239: deaminase activity	5.43E-06
3	GO:0003896: DNA primase activity	1.49E-05
4	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.49E-05
5	GO:0003729: mRNA binding	1.77E-05
6	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	4.27E-05
7	GO:0003678: DNA helicase activity	2.22E-04
8	GO:0046982: protein heterodimerization activity	3.23E-04
9	GO:0004521: endoribonuclease activity	3.35E-04
10	GO:0003682: chromatin binding	3.48E-04
11	GO:0003887: DNA-directed DNA polymerase activity	4.58E-04
12	GO:0008094: DNA-dependent ATPase activity	5.55E-04
13	GO:0003697: single-stranded DNA binding	1.53E-03
14	GO:0003677: DNA binding	8.47E-03
15	GO:0005507: copper ion binding	1.60E-02
16	GO:0016787: hydrolase activity	3.55E-02

Rank	GO Term	Adjusted P value
1	GO:0043601: nuclear replisome	0.00E+00
2	GO:0005721: pericentric heterochromatin	0.00E+00
3	GO:0005658: alpha DNA polymerase:primase complex	1.41E-08
4	GO:0000790: nuclear chromatin	3.57E-08
5	GO:0042555: MCM complex	6.88E-08
6	GO:0005840: ribosome	2.05E-07
7	GO:0022625: cytosolic large ribosomal subunit	2.28E-07
8	GO:0005730: nucleolus	7.31E-07
9	GO:0022626: cytosolic ribosome	1.57E-06
10	GO:0005971: ribonucleoside-diphosphate reductase complex	5.43E-06
11	GO:0000792: heterochromatin	1.49E-05
12	GO:0045254: pyruvate dehydrogenase complex	1.49E-05
13	GO:0000347: THO complex	1.46E-04
14	GO:0016020: membrane	2.67E-04
15	GO:0022627: cytosolic small ribosomal subunit	2.81E-04
16	GO:0005829: cytosol	3.30E-04
17	GO:0009941: chloroplast envelope	1.28E-03
18	GO:0015934: large ribosomal subunit	1.44E-03
19	GO:0000786: nucleosome	1.49E-03
20	GO:0005759: mitochondrial matrix	3.81E-03
21	GO:0009506: plasmodesma	4.71E-03
22	GO:0005773: vacuole	1.05E-02
23	GO:0009579: thylakoid	1.42E-02
24	GO:0009536: plastid	2.38E-02
25	GO:0009507: chloroplast	3.56E-02
26	GO:0005737: cytoplasm	3.92E-02
27	GO:0005774: vacuolar membrane	5.00E-02