co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G54060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006778: porphyrin-containing compound metabolic process	0.00E+00
2	GO:0009718: anthocyanin-containing compound biosynthetic process	9.89E-13
3	GO:0031542: positive regulation of anthocyanin biosynthetic process	1.17E-09
4	GO:0046283: anthocyanin-containing compound metabolic process	3.93E-08
5	GO:1900384: regulation of flavonol biosynthetic process	2.75E-06
6	GO:0009962: regulation of flavonoid biosynthetic process	2.75E-06
7	GO:2000029: regulation of proanthocyanidin biosynthetic process	2.75E-06
8	GO:0009745: sucrose mediated signaling	7.70E-06
9	GO:0017157: regulation of exocytosis	1.45E-05
10	GO:0009867: jasmonic acid mediated signaling pathway	1.57E-05
11	GO:0031540: regulation of anthocyanin biosynthetic process	9.62E-05
12	GO:0019430: removal of superoxide radicals	1.11E-04
13	GO:0009698: phenylpropanoid metabolic process	1.78E-04
14	GO:0010026: trichome differentiation	3.11E-04
15	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.53E-04
16	GO:0010214: seed coat development	3.94E-04
17	GO:0048235: pollen sperm cell differentiation	5.50E-04
18	GO:0009813: flavonoid biosynthetic process	8.20E-04
19	GO:0009407: toxin catabolic process	8.45E-04
20	GO:0030154: cell differentiation	9.99E-04
21	GO:0009636: response to toxic substance	1.17E-03
22	GO:0048316: seed development	1.50E-03
23	GO:0009651: response to salt stress	2.97E-03
24	GO:0006970: response to osmotic stress	3.37E-03
25	GO:0009723: response to ethylene	3.54E-03
26	GO:0080167: response to karrikin	3.71E-03
27	GO:0009753: response to jasmonic acid	5.08E-03
28	GO:0006351: transcription, DNA-templated	1.01E-02
29	GO:0009733: response to auxin	1.28E-02
30	GO:0006810: transport	1.55E-02
31	GO:0006355: regulation of transcription, DNA-templated	1.71E-02
32	GO:0009737: response to abscisic acid	2.02E-02
33	GO:0050832: defense response to fungus	2.56E-02

Rank	GO Term	Adjusted P value
1	GO:0047890: flavanone 4-reductase activity	0.00E+00
2	GO:0080018: anthocyanin 5-O-glucosyltransferase activity	0.00E+00
3	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
4	GO:0050736: O-malonyltransferase activity	7.70E-06
5	GO:0043169: cation binding	1.45E-05
6	GO:0019905: syntaxin binding	3.25E-05
7	GO:0017137: Rab GTPase binding	4.33E-05
8	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.96E-04
9	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.15E-04
10	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.40E-04
11	GO:0035251: UDP-glucosyltransferase activity	3.32E-04
12	GO:0050662: coenzyme binding	4.82E-04
13	GO:0016740: transferase activity	5.69E-04
14	GO:0005096: GTPase activator activity	8.20E-04
15	GO:0044212: transcription regulatory region DNA binding	9.22E-04
16	GO:0004364: glutathione transferase activity	1.06E-03
17	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.50E-03
18	GO:0008194: UDP-glycosyltransferase activity	2.58E-03
19	GO:0043565: sequence-specific DNA binding	4.51E-03
20	GO:0005515: protein binding	5.19E-03
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	9.77E-03
22	GO:0003677: DNA binding	1.19E-02
23	GO:0046983: protein dimerization activity	1.45E-02
24	GO:0020037: heme binding	1.63E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	1.45E-05
2	GO:0005795: Golgi stack	2.52E-04
3	GO:0009705: plant-type vacuole membrane	2.39E-03
4	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.41E-03
5	GO:0031969: chloroplast membrane	3.71E-03
6	GO:0005737: cytoplasm	8.03E-03
7	GO:0000139: Golgi membrane	1.46E-02
8	GO:0005789: endoplasmic reticulum membrane	1.59E-02
9	GO:0005773: vacuole	3.88E-02
10	GO:0005783: endoplasmic reticulum	4.72E-02