Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G53560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0080053: response to phenylalanine0.00E+00
3GO:0006793: phosphorus metabolic process0.00E+00
4GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
5GO:0043201: response to leucine0.00E+00
6GO:0080052: response to histidine0.00E+00
7GO:1990641: response to iron ion starvation6.26E-05
8GO:0009809: lignin biosynthetic process1.45E-04
9GO:0006101: citrate metabolic process1.52E-04
10GO:0042939: tripeptide transport1.52E-04
11GO:0051592: response to calcium ion1.52E-04
12GO:0009866: induced systemic resistance, ethylene mediated signaling pathway1.52E-04
13GO:0016998: cell wall macromolecule catabolic process2.08E-04
14GO:0009620: response to fungus2.09E-04
15GO:0010351: lithium ion transport2.57E-04
16GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway2.57E-04
17GO:0006556: S-adenosylmethionine biosynthetic process2.57E-04
18GO:0006882: cellular zinc ion homeostasis3.73E-04
19GO:0042938: dipeptide transport4.99E-04
20GO:0033356: UDP-L-arabinose metabolic process4.99E-04
21GO:0006097: glyoxylate cycle6.32E-04
22GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly7.73E-04
23GO:0010256: endomembrane system organization7.73E-04
24GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione7.73E-04
25GO:0009817: defense response to fungus, incompatible interaction7.90E-04
26GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response9.20E-04
27GO:0030026: cellular manganese ion homeostasis1.07E-03
28GO:0006102: isocitrate metabolic process1.24E-03
29GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.24E-03
30GO:0009821: alkaloid biosynthetic process1.58E-03
31GO:0032259: methylation1.67E-03
32GO:0009751: response to salicylic acid1.73E-03
33GO:0042742: defense response to bacterium1.80E-03
34GO:0055062: phosphate ion homeostasis1.96E-03
35GO:0006032: chitin catabolic process1.96E-03
36GO:0006626: protein targeting to mitochondrion2.58E-03
37GO:0046686: response to cadmium ion3.52E-03
38GO:0009611: response to wounding3.73E-03
39GO:0006874: cellular calcium ion homeostasis3.74E-03
40GO:0030433: ubiquitin-dependent ERAD pathway4.24E-03
41GO:0071456: cellular response to hypoxia4.24E-03
42GO:0006730: one-carbon metabolic process4.24E-03
43GO:0009693: ethylene biosynthetic process4.50E-03
44GO:0042391: regulation of membrane potential5.31E-03
45GO:0007165: signal transduction5.47E-03
46GO:0006814: sodium ion transport5.88E-03
47GO:0071281: cellular response to iron ion7.07E-03
48GO:0009615: response to virus8.35E-03
49GO:0006979: response to oxidative stress8.97E-03
50GO:0009627: systemic acquired resistance9.01E-03
51GO:0006508: proteolysis9.85E-03
52GO:0030244: cellulose biosynthetic process1.01E-02
53GO:0009832: plant-type cell wall biogenesis1.04E-02
54GO:0006499: N-terminal protein myristoylation1.08E-02
55GO:0009407: toxin catabolic process1.08E-02
56GO:0010043: response to zinc ion1.11E-02
57GO:0009753: response to jasmonic acid1.23E-02
58GO:0006099: tricarboxylic acid cycle1.23E-02
59GO:0006468: protein phosphorylation1.25E-02
60GO:0042542: response to hydrogen peroxide1.38E-02
61GO:0006810: transport1.45E-02
62GO:0009636: response to toxic substance1.54E-02
63GO:0006812: cation transport1.67E-02
64GO:0009846: pollen germination1.67E-02
65GO:0042538: hyperosmotic salinity response1.67E-02
66GO:0006857: oligopeptide transport1.84E-02
67GO:0055114: oxidation-reduction process2.13E-02
68GO:0009624: response to nematode2.25E-02
69GO:0009058: biosynthetic process2.75E-02
70GO:0009845: seed germination2.80E-02
71GO:0016036: cellular response to phosphate starvation3.17E-02
72GO:0050832: defense response to fungus3.50E-02
73GO:0009617: response to bacterium3.77E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0004622: lysophospholipase activity0.00E+00
3GO:0003846: 2-acylglycerol O-acyltransferase activity0.00E+00
4GO:0005496: steroid binding6.77E-06
5GO:0031219: levanase activity6.26E-05
6GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity6.26E-05
7GO:0051669: fructan beta-fructosidase activity6.26E-05
8GO:0042937: tripeptide transporter activity1.52E-04
9GO:0004103: choline kinase activity1.52E-04
10GO:0004566: beta-glucuronidase activity1.52E-04
11GO:0003994: aconitate hydratase activity1.52E-04
12GO:0016805: dipeptidase activity2.57E-04
13GO:0004478: methionine adenosyltransferase activity2.57E-04
14GO:0008430: selenium binding2.57E-04
15GO:0004416: hydroxyacylglutathione hydrolase activity3.73E-04
16GO:0015368: calcium:cation antiporter activity4.99E-04
17GO:0042936: dipeptide transporter activity4.99E-04
18GO:0015369: calcium:proton antiporter activity4.99E-04
19GO:0004040: amidase activity6.32E-04
20GO:0036402: proteasome-activating ATPase activity7.73E-04
21GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.06E-04
22GO:0004656: procollagen-proline 4-dioxygenase activity9.20E-04
23GO:0008235: metalloexopeptidase activity1.07E-03
24GO:0008121: ubiquinol-cytochrome-c reductase activity1.07E-03
25GO:0052747: sinapyl alcohol dehydrogenase activity1.24E-03
26GO:0015491: cation:cation antiporter activity1.24E-03
27GO:0004714: transmembrane receptor protein tyrosine kinase activity1.24E-03
28GO:0004674: protein serine/threonine kinase activity1.56E-03
29GO:0016844: strictosidine synthase activity1.77E-03
30GO:0009055: electron carrier activity1.92E-03
31GO:0004568: chitinase activity1.96E-03
32GO:0008171: O-methyltransferase activity1.96E-03
33GO:0004177: aminopeptidase activity2.17E-03
34GO:0004129: cytochrome-c oxidase activity2.17E-03
35GO:0008794: arsenate reductase (glutaredoxin) activity2.17E-03
36GO:0045551: cinnamyl-alcohol dehydrogenase activity2.37E-03
37GO:0015035: protein disulfide oxidoreductase activity2.44E-03
38GO:0017025: TBP-class protein binding3.03E-03
39GO:0004190: aspartic-type endopeptidase activity3.03E-03
40GO:0030552: cAMP binding3.03E-03
41GO:0030553: cGMP binding3.03E-03
42GO:0031418: L-ascorbic acid binding3.49E-03
43GO:0005216: ion channel activity3.74E-03
44GO:0005249: voltage-gated potassium channel activity5.31E-03
45GO:0030551: cyclic nucleotide binding5.31E-03
46GO:0008168: methyltransferase activity6.04E-03
47GO:0050660: flavin adenine dinucleotide binding7.25E-03
48GO:0005524: ATP binding7.30E-03
49GO:0008757: S-adenosylmethionine-dependent methyltransferase activity9.70E-03
50GO:0004222: metalloendopeptidase activity1.08E-02
51GO:0030145: manganese ion binding1.11E-02
52GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.19E-02
53GO:0051539: 4 iron, 4 sulfur cluster binding1.30E-02
54GO:0004364: glutathione transferase activity1.38E-02
55GO:0051537: 2 iron, 2 sulfur cluster binding1.50E-02
56GO:0016301: kinase activity1.71E-02
57GO:0016887: ATPase activity1.79E-02
58GO:0016298: lipase activity1.80E-02
59GO:0004252: serine-type endopeptidase activity2.85E-02
60GO:0005516: calmodulin binding3.08E-02
61GO:0005506: iron ion binding4.07E-02
62GO:0005215: transporter activity4.56E-02
63GO:0043531: ADP binding4.84E-02
RankGO TermAdjusted P value
1GO:0005765: lysosomal membrane7.62E-05
2GO:0005783: endoplasmic reticulum2.33E-04
3GO:0005751: mitochondrial respiratory chain complex IV2.57E-04
4GO:0030660: Golgi-associated vesicle membrane4.99E-04
5GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane4.99E-04
6GO:0031597: cytosolic proteasome complex9.20E-04
7GO:0031595: nuclear proteasome complex1.07E-03
8GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.24E-03
9GO:0008540: proteasome regulatory particle, base subcomplex1.77E-03
10GO:0005750: mitochondrial respiratory chain complex III2.80E-03
11GO:0009705: plant-type vacuole membrane4.06E-03
12GO:0019898: extrinsic component of membrane6.17E-03
13GO:0032580: Golgi cisterna membrane7.38E-03
14GO:0016021: integral component of membrane7.66E-03
15GO:0005886: plasma membrane1.49E-02
16GO:0005829: cytosol1.58E-02
17GO:0031966: mitochondrial membrane1.67E-02
18GO:0000502: proteasome complex1.75E-02
19GO:0005794: Golgi apparatus1.93E-02
20GO:0005834: heterotrimeric G-protein complex2.07E-02
21GO:0005773: vacuole2.24E-02
22GO:0016020: membrane2.91E-02
23GO:0005615: extracellular space3.60E-02
24GO:0005618: cell wall4.98E-02
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Gene type



Gene DE type