Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G53550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
3GO:1900367: positive regulation of defense response to insect0.00E+00
4GO:1900426: positive regulation of defense response to bacterium3.88E-07
5GO:0080142: regulation of salicylic acid biosynthetic process3.37E-06
6GO:0009626: plant-type hypersensitive response7.73E-06
7GO:0043069: negative regulation of programmed cell death5.49E-05
8GO:0055081: anion homeostasis5.64E-05
9GO:1901183: positive regulation of camalexin biosynthetic process5.64E-05
10GO:0051245: negative regulation of cellular defense response5.64E-05
11GO:0070588: calcium ion transmembrane transport1.16E-04
12GO:0000162: tryptophan biosynthetic process1.30E-04
13GO:0031349: positive regulation of defense response1.37E-04
14GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.37E-04
15GO:0010618: aerenchyma formation1.37E-04
16GO:0002230: positive regulation of defense response to virus by host2.34E-04
17GO:0055074: calcium ion homeostasis2.34E-04
18GO:0072661: protein targeting to plasma membrane2.34E-04
19GO:0042742: defense response to bacterium2.67E-04
20GO:0061025: membrane fusion3.25E-04
21GO:0006612: protein targeting to membrane3.41E-04
22GO:1902290: positive regulation of defense response to oomycetes3.41E-04
23GO:0005987: sucrose catabolic process3.41E-04
24GO:0071219: cellular response to molecule of bacterial origin4.56E-04
25GO:0010363: regulation of plant-type hypersensitive response4.56E-04
26GO:0009617: response to bacterium5.08E-04
27GO:0046283: anthocyanin-containing compound metabolic process5.78E-04
28GO:0010225: response to UV-C5.78E-04
29GO:0006906: vesicle fusion5.97E-04
30GO:0010942: positive regulation of cell death7.07E-04
31GO:0009920: cell plate formation involved in plant-type cell wall biogenesis7.07E-04
32GO:0006468: protein phosphorylation8.13E-04
33GO:0009612: response to mechanical stimulus8.44E-04
34GO:0006694: steroid biosynthetic process8.44E-04
35GO:0010310: regulation of hydrogen peroxide metabolic process8.44E-04
36GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response8.44E-04
37GO:0000911: cytokinesis by cell plate formation8.44E-04
38GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c9.85E-04
39GO:1900057: positive regulation of leaf senescence9.85E-04
40GO:0006887: exocytosis1.02E-03
41GO:0009737: response to abscisic acid1.03E-03
42GO:0042542: response to hydrogen peroxide1.06E-03
43GO:0051707: response to other organism1.10E-03
44GO:0043068: positive regulation of programmed cell death1.13E-03
45GO:0006102: isocitrate metabolic process1.13E-03
46GO:0009787: regulation of abscisic acid-activated signaling pathway1.13E-03
47GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.13E-03
48GO:0010204: defense response signaling pathway, resistance gene-independent1.29E-03
49GO:2000031: regulation of salicylic acid mediated signaling pathway1.29E-03
50GO:0009699: phenylpropanoid biosynthetic process1.29E-03
51GO:0010497: plasmodesmata-mediated intercellular transport1.29E-03
52GO:0010112: regulation of systemic acquired resistance1.45E-03
53GO:2000280: regulation of root development1.62E-03
54GO:0048268: clathrin coat assembly1.62E-03
55GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.62E-03
56GO:0010105: negative regulation of ethylene-activated signaling pathway2.16E-03
57GO:0002213: defense response to insect2.16E-03
58GO:0006541: glutamine metabolic process2.56E-03
59GO:0080147: root hair cell development3.18E-03
60GO:0009863: salicylic acid mediated signaling pathway3.18E-03
61GO:0010150: leaf senescence3.55E-03
62GO:0048278: vesicle docking3.63E-03
63GO:2000022: regulation of jasmonic acid mediated signaling pathway3.86E-03
64GO:0031348: negative regulation of defense response3.86E-03
65GO:0009625: response to insect4.10E-03
66GO:0042391: regulation of membrane potential4.83E-03
67GO:0000413: protein peptidyl-prolyl isomerization4.83E-03
68GO:0006520: cellular amino acid metabolic process5.09E-03
69GO:0048544: recognition of pollen5.35E-03
70GO:0006623: protein targeting to vacuole5.61E-03
71GO:0000302: response to reactive oxygen species5.88E-03
72GO:0002229: defense response to oomycetes5.88E-03
73GO:0016192: vesicle-mediated transport7.13E-03
74GO:0050832: defense response to fungus7.58E-03
75GO:0001666: response to hypoxia7.59E-03
76GO:0009816: defense response to bacterium, incompatible interaction7.89E-03
77GO:0009627: systemic acquired resistance8.19E-03
78GO:0016042: lipid catabolic process9.72E-03
79GO:0006629: lipid metabolic process1.00E-02
80GO:0007568: aging1.01E-02
81GO:0015031: protein transport1.01E-02
82GO:0009867: jasmonic acid mediated signaling pathway1.08E-02
83GO:0045087: innate immune response1.08E-02
84GO:0009409: response to cold1.10E-02
85GO:0006099: tricarboxylic acid cycle1.11E-02
86GO:0006897: endocytosis1.22E-02
87GO:0006631: fatty acid metabolic process1.22E-02
88GO:0010224: response to UV-B1.63E-02
89GO:0009620: response to fungus1.92E-02
90GO:0006952: defense response1.94E-02
91GO:0055085: transmembrane transport2.26E-02
92GO:0006457: protein folding2.31E-02
93GO:0006633: fatty acid biosynthetic process2.82E-02
94GO:0006508: proteolysis3.07E-02
95GO:0006470: protein dephosphorylation3.32E-02
96GO:0007166: cell surface receptor signaling pathway3.32E-02
97GO:0010468: regulation of gene expression3.42E-02
98GO:0080167: response to karrikin4.80E-02
RankGO TermAdjusted P value
1GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
2GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
3GO:0016301: kinase activity4.18E-06
4GO:0004564: beta-fructofuranosidase activity2.31E-05
5GO:0004575: sucrose alpha-glucosidase activity4.56E-05
6GO:0004425: indole-3-glycerol-phosphate synthase activity5.64E-05
7GO:0005484: SNAP receptor activity7.68E-05
8GO:0005388: calcium-transporting ATPase activity8.84E-05
9GO:0005524: ATP binding9.26E-05
10GO:0005516: calmodulin binding1.49E-04
11GO:0004049: anthranilate synthase activity2.34E-04
12GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity2.34E-04
13GO:0004148: dihydrolipoyl dehydrogenase activity2.34E-04
14GO:0004674: protein serine/threonine kinase activity2.93E-04
15GO:0004449: isocitrate dehydrogenase (NAD+) activity3.41E-04
16GO:0033926: glycopeptide alpha-N-acetylgalactosaminidase activity5.78E-04
17GO:0015301: anion:anion antiporter activity5.78E-04
18GO:0005452: inorganic anion exchanger activity5.78E-04
19GO:0004806: triglyceride lipase activity6.28E-04
20GO:0004029: aldehyde dehydrogenase (NAD) activity7.07E-04
21GO:0004656: procollagen-proline 4-dioxygenase activity8.44E-04
22GO:0102391: decanoate--CoA ligase activity8.44E-04
23GO:0000149: SNARE binding9.43E-04
24GO:0004467: long-chain fatty acid-CoA ligase activity9.85E-04
25GO:0008121: ubiquinol-cytochrome-c reductase activity9.85E-04
26GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.62E-03
27GO:0005545: 1-phosphatidylinositol binding1.79E-03
28GO:0008559: xenobiotic-transporting ATPase activity1.97E-03
29GO:0005262: calcium channel activity2.36E-03
30GO:0003712: transcription cofactor activity2.76E-03
31GO:0030552: cAMP binding2.76E-03
32GO:0030553: cGMP binding2.76E-03
33GO:0005216: ion channel activity3.40E-03
34GO:0004707: MAP kinase activity3.63E-03
35GO:0005507: copper ion binding4.77E-03
36GO:0005249: voltage-gated potassium channel activity4.83E-03
37GO:0030551: cyclic nucleotide binding4.83E-03
38GO:0030276: clathrin binding5.09E-03
39GO:0004197: cysteine-type endopeptidase activity6.15E-03
40GO:0004683: calmodulin-dependent protein kinase activity8.50E-03
41GO:0050897: cobalt ion binding1.01E-02
42GO:0030145: manganese ion binding1.01E-02
43GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.08E-02
44GO:0004712: protein serine/threonine/tyrosine kinase activity1.15E-02
45GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.44E-02
46GO:0016298: lipase activity1.63E-02
47GO:0045735: nutrient reservoir activity1.79E-02
48GO:0051082: unfolded protein binding2.04E-02
49GO:0030246: carbohydrate binding2.40E-02
50GO:0008565: protein transporter activity2.73E-02
51GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.87E-02
52GO:0005509: calcium ion binding3.33E-02
53GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.58E-02
54GO:0050660: flavin adenine dinucleotide binding4.57E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.15E-05
2GO:0005750: mitochondrial respiratory chain complex III1.02E-04
3GO:0005901: caveola1.37E-04
4GO:0016021: integral component of membrane1.78E-04
5GO:0005887: integral component of plasma membrane3.33E-04
6GO:0009504: cell plate3.49E-04
7GO:0000164: protein phosphatase type 1 complex5.78E-04
8GO:0031201: SNARE complex1.02E-03
9GO:0031901: early endosome membrane1.45E-03
10GO:0030665: clathrin-coated vesicle membrane1.62E-03
11GO:0005747: mitochondrial respiratory chain complex I1.78E-03
12GO:0017119: Golgi transport complex1.79E-03
13GO:0005905: clathrin-coated pit3.63E-03
14GO:0030136: clathrin-coated vesicle4.58E-03
15GO:0005788: endoplasmic reticulum lumen7.89E-03
16GO:0005643: nuclear pore9.13E-03
17GO:0005774: vacuolar membrane9.56E-03
18GO:0000325: plant-type vacuole1.01E-02
19GO:0031902: late endosome membrane1.22E-02
20GO:0012505: endomembrane system2.00E-02
21GO:0009706: chloroplast inner membrane2.04E-02
22GO:0005623: cell2.45E-02
23GO:0009506: plasmodesma2.46E-02
24GO:0005829: cytosol2.64E-02
25GO:0005783: endoplasmic reticulum2.73E-02
26GO:0031225: anchored component of membrane2.78E-02
27GO:0005759: mitochondrial matrix2.82E-02
28GO:0009705: plant-type vacuole membrane3.02E-02
29GO:0005768: endosome3.25E-02
30GO:0048046: apoplast3.79E-02
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Gene type



Gene DE type