Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G52860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006497: protein lipidation0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
4GO:0010055: atrichoblast differentiation0.00E+00
5GO:0043201: response to leucine0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:0080052: response to histidine0.00E+00
8GO:0080053: response to phenylalanine0.00E+00
9GO:0009620: response to fungus2.28E-05
10GO:0006536: glutamate metabolic process3.23E-05
11GO:0009817: defense response to fungus, incompatible interaction3.66E-05
12GO:0010150: leaf senescence9.61E-05
13GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.06E-04
14GO:0042742: defense response to bacterium1.20E-04
15GO:0032491: detection of molecule of fungal origin2.11E-04
16GO:0032107: regulation of response to nutrient levels2.11E-04
17GO:0051938: L-glutamate import2.11E-04
18GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.11E-04
19GO:0010726: positive regulation of hydrogen peroxide metabolic process2.11E-04
20GO:1901183: positive regulation of camalexin biosynthetic process2.11E-04
21GO:0010204: defense response signaling pathway, resistance gene-independent2.22E-04
22GO:0010120: camalexin biosynthetic process2.22E-04
23GO:0009056: catabolic process2.70E-04
24GO:0010200: response to chitin3.74E-04
25GO:0006952: defense response4.13E-04
26GO:0006468: protein phosphorylation4.20E-04
27GO:0043091: L-arginine import4.71E-04
28GO:0009838: abscission4.71E-04
29GO:0015802: basic amino acid transport4.71E-04
30GO:0009866: induced systemic resistance, ethylene mediated signaling pathway4.71E-04
31GO:0002240: response to molecule of oomycetes origin4.71E-04
32GO:0043066: negative regulation of apoptotic process4.71E-04
33GO:0042939: tripeptide transport4.71E-04
34GO:0050832: defense response to fungus6.26E-04
35GO:0009751: response to salicylic acid6.92E-04
36GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway7.67E-04
37GO:0006874: cellular calcium ion homeostasis9.63E-04
38GO:0070301: cellular response to hydrogen peroxide1.09E-03
39GO:0071456: cellular response to hypoxia1.15E-03
40GO:0010227: floral organ abscission1.25E-03
41GO:0042938: dipeptide transport1.45E-03
42GO:0045227: capsule polysaccharide biosynthetic process1.45E-03
43GO:0033358: UDP-L-arabinose biosynthetic process1.45E-03
44GO:1901002: positive regulation of response to salt stress1.45E-03
45GO:0000304: response to singlet oxygen1.85E-03
46GO:0002238: response to molecule of fungal origin2.28E-03
47GO:0006561: proline biosynthetic process2.28E-03
48GO:0010942: positive regulation of cell death2.28E-03
49GO:0010256: endomembrane system organization2.28E-03
50GO:0010252: auxin homeostasis2.54E-03
51GO:0007165: signal transduction2.57E-03
52GO:0051607: defense response to virus2.86E-03
53GO:0009615: response to virus3.03E-03
54GO:1900056: negative regulation of leaf senescence3.23E-03
55GO:0019745: pentacyclic triterpenoid biosynthetic process3.23E-03
56GO:1900057: positive regulation of leaf senescence3.23E-03
57GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.23E-03
58GO:0009627: systemic acquired resistance3.38E-03
59GO:0009642: response to light intensity3.74E-03
60GO:0030091: protein repair3.74E-03
61GO:0009850: auxin metabolic process3.74E-03
62GO:0008219: cell death3.94E-03
63GO:0009407: toxin catabolic process4.35E-03
64GO:0007166: cell surface receptor signaling pathway4.59E-03
65GO:0009617: response to bacterium4.84E-03
66GO:0009821: alkaloid biosynthetic process4.85E-03
67GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.44E-03
68GO:0009870: defense response signaling pathway, resistance gene-dependent6.06E-03
69GO:0006032: chitin catabolic process6.06E-03
70GO:0051707: response to other organism6.43E-03
71GO:0000272: polysaccharide catabolic process6.69E-03
72GO:0009682: induced systemic resistance6.69E-03
73GO:0009089: lysine biosynthetic process via diaminopimelate6.69E-03
74GO:0009636: response to toxic substance7.22E-03
75GO:0006790: sulfur compound metabolic process7.36E-03
76GO:0055046: microgametogenesis8.04E-03
77GO:0009718: anthocyanin-containing compound biosynthetic process8.04E-03
78GO:0010102: lateral root morphogenesis8.04E-03
79GO:0009611: response to wounding8.07E-03
80GO:0042538: hyperosmotic salinity response8.07E-03
81GO:0009723: response to ethylene8.12E-03
82GO:0010143: cutin biosynthetic process8.75E-03
83GO:0002237: response to molecule of bacterial origin8.75E-03
84GO:0070588: calcium ion transmembrane transport9.48E-03
85GO:0046854: phosphatidylinositol phosphorylation9.48E-03
86GO:0009969: xyloglucan biosynthetic process9.48E-03
87GO:0009225: nucleotide-sugar metabolic process9.48E-03
88GO:0010025: wax biosynthetic process1.02E-02
89GO:0005992: trehalose biosynthetic process1.10E-02
90GO:0003333: amino acid transmembrane transport1.26E-02
91GO:0016998: cell wall macromolecule catabolic process1.26E-02
92GO:0016042: lipid catabolic process1.40E-02
93GO:0006012: galactose metabolic process1.43E-02
94GO:0009561: megagametogenesis1.52E-02
95GO:0042631: cellular response to water deprivation1.70E-02
96GO:0006885: regulation of pH1.79E-02
97GO:0042752: regulation of circadian rhythm1.88E-02
98GO:0006623: protein targeting to vacuole1.98E-02
99GO:0002229: defense response to oomycetes2.08E-02
100GO:0010193: response to ozone2.08E-02
101GO:0006914: autophagy2.38E-02
102GO:0009607: response to biotic stimulus2.81E-02
103GO:0016310: phosphorylation3.09E-02
104GO:0009832: plant-type cell wall biogenesis3.38E-02
105GO:0045893: positive regulation of transcription, DNA-templated3.55E-02
106GO:0007568: aging3.62E-02
107GO:0048527: lateral root development3.62E-02
108GO:0009867: jasmonic acid mediated signaling pathway3.86E-02
109GO:0045087: innate immune response3.86E-02
110GO:0006839: mitochondrial transport4.24E-02
111GO:0006631: fatty acid metabolic process4.37E-02
112GO:0042542: response to hydrogen peroxide4.50E-02
RankGO TermAdjusted P value
1GO:0003796: lysozyme activity0.00E+00
2GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
3GO:0004351: glutamate decarboxylase activity1.76E-05
4GO:0010279: indole-3-acetic acid amido synthetase activity3.23E-05
5GO:0016301: kinase activity4.27E-05
6GO:0010285: L,L-diaminopimelate aminotransferase activity2.11E-04
7GO:0031127: alpha-(1,2)-fucosyltransferase activity2.11E-04
8GO:0031957: very long-chain fatty acid-CoA ligase activity2.11E-04
9GO:0004674: protein serine/threonine kinase activity2.82E-04
10GO:0052689: carboxylic ester hydrolase activity4.23E-04
11GO:0042937: tripeptide transporter activity4.71E-04
12GO:0004103: choline kinase activity4.71E-04
13GO:0019779: Atg8 activating enzyme activity4.71E-04
14GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.55E-04
15GO:0005217: intracellular ligand-gated ion channel activity7.14E-04
16GO:0004970: ionotropic glutamate receptor activity7.14E-04
17GO:0004383: guanylate cyclase activity7.67E-04
18GO:0042409: caffeoyl-CoA O-methyltransferase activity7.67E-04
19GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.67E-04
20GO:0010178: IAA-amino acid conjugate hydrolase activity1.09E-03
21GO:0015189: L-lysine transmembrane transporter activity1.09E-03
22GO:0015181: arginine transmembrane transporter activity1.09E-03
23GO:0042299: lupeol synthase activity1.09E-03
24GO:0050373: UDP-arabinose 4-epimerase activity1.45E-03
25GO:0042936: dipeptide transporter activity1.45E-03
26GO:0005313: L-glutamate transmembrane transporter activity1.45E-03
27GO:0016866: intramolecular transferase activity1.45E-03
28GO:0045735: nutrient reservoir activity1.53E-03
29GO:0050660: flavin adenine dinucleotide binding1.62E-03
30GO:0005496: steroid binding1.85E-03
31GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.74E-03
32GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.74E-03
33GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.74E-03
34GO:0102391: decanoate--CoA ligase activity2.74E-03
35GO:0003978: UDP-glucose 4-epimerase activity2.74E-03
36GO:0030170: pyridoxal phosphate binding2.93E-03
37GO:0005085: guanyl-nucleotide exchange factor activity3.23E-03
38GO:0004467: long-chain fatty acid-CoA ligase activity3.23E-03
39GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity3.23E-03
40GO:0004714: transmembrane receptor protein tyrosine kinase activity3.74E-03
41GO:0005516: calmodulin binding3.96E-03
42GO:0030145: manganese ion binding4.55E-03
43GO:0005524: ATP binding4.72E-03
44GO:0008417: fucosyltransferase activity4.85E-03
45GO:0016844: strictosidine synthase activity5.44E-03
46GO:0015174: basic amino acid transmembrane transporter activity5.44E-03
47GO:0004568: chitinase activity6.06E-03
48GO:0008171: O-methyltransferase activity6.06E-03
49GO:0004364: glutathione transferase activity6.17E-03
50GO:0008559: xenobiotic-transporting ATPase activity6.69E-03
51GO:0015114: phosphate ion transmembrane transporter activity8.04E-03
52GO:0005388: calcium-transporting ATPase activity8.04E-03
53GO:0016298: lipase activity8.97E-03
54GO:0001046: core promoter sequence-specific DNA binding1.10E-02
55GO:0030246: carbohydrate binding1.22E-02
56GO:0004499: N,N-dimethylaniline monooxygenase activity1.52E-02
57GO:0009055: electron carrier activity1.59E-02
58GO:0005102: receptor binding1.61E-02
59GO:0005451: monovalent cation:proton antiporter activity1.70E-02
60GO:0005199: structural constituent of cell wall1.79E-02
61GO:0015299: solute:proton antiporter activity1.88E-02
62GO:0019901: protein kinase binding1.98E-02
63GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.00E-02
64GO:0015385: sodium:proton antiporter activity2.28E-02
65GO:0008483: transaminase activity2.49E-02
66GO:0008237: metallopeptidase activity2.49E-02
67GO:0030247: polysaccharide binding3.04E-02
68GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.15E-02
69GO:0015238: drug transmembrane transporter activity3.38E-02
70GO:0008422: beta-glucosidase activity4.11E-02
71GO:0050661: NADP binding4.24E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane2.05E-05
2GO:0009530: primary cell wall7.67E-04
3GO:0005886: plasma membrane1.50E-03
4GO:0005770: late endosome1.71E-03
5GO:0032588: trans-Golgi network membrane2.28E-03
6GO:0032580: Golgi cisterna membrane2.54E-03
7GO:0005615: extracellular space4.46E-03
8GO:0000325: plant-type vacuole4.55E-03
9GO:0005576: extracellular region9.09E-03
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Gene type



Gene DE type