Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G51640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0006592: ornithine biosynthetic process0.00E+00
3GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
4GO:0046109: uridine biosynthetic process0.00E+00
5GO:0010360: negative regulation of anion channel activity0.00E+00
6GO:0006858: extracellular transport0.00E+00
7GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
8GO:0006983: ER overload response0.00E+00
9GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
10GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
11GO:0010793: regulation of mRNA export from nucleus0.00E+00
12GO:0048227: plasma membrane to endosome transport0.00E+00
13GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
14GO:0000188: inactivation of MAPK activity0.00E+00
15GO:0010398: xylogalacturonan metabolic process0.00E+00
16GO:0051788: response to misfolded protein2.91E-06
17GO:0043248: proteasome assembly1.01E-04
18GO:0006014: D-ribose metabolic process1.01E-04
19GO:0010150: leaf senescence1.60E-04
20GO:0016559: peroxisome fission2.32E-04
21GO:0009819: drought recovery2.32E-04
22GO:0048455: stamen formation2.51E-04
23GO:0035266: meristem growth2.51E-04
24GO:0098710: guanine import across plasma membrane2.51E-04
25GO:0007292: female gamete generation2.51E-04
26GO:0019567: arabinose biosynthetic process2.51E-04
27GO:0006481: C-terminal protein methylation2.51E-04
28GO:0010941: regulation of cell death2.51E-04
29GO:0035344: hypoxanthine transport2.51E-04
30GO:1902361: mitochondrial pyruvate transmembrane transport2.51E-04
31GO:0010265: SCF complex assembly2.51E-04
32GO:0098721: uracil import across plasma membrane2.51E-04
33GO:0098702: adenine import across plasma membrane2.51E-04
34GO:0030968: endoplasmic reticulum unfolded protein response2.86E-04
35GO:0009821: alkaloid biosynthetic process3.46E-04
36GO:0008202: steroid metabolic process4.10E-04
37GO:0009615: response to virus4.49E-04
38GO:0043069: negative regulation of programmed cell death4.80E-04
39GO:0015914: phospholipid transport5.53E-04
40GO:0050684: regulation of mRNA processing5.53E-04
41GO:0043066: negative regulation of apoptotic process5.53E-04
42GO:0006850: mitochondrial pyruvate transport5.53E-04
43GO:0015865: purine nucleotide transport5.53E-04
44GO:0019374: galactolipid metabolic process5.53E-04
45GO:1902000: homogentisate catabolic process5.53E-04
46GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.53E-04
47GO:0042325: regulation of phosphorylation5.53E-04
48GO:0019441: tryptophan catabolic process to kynurenine5.53E-04
49GO:0000266: mitochondrial fission6.33E-04
50GO:0046686: response to cadmium ion7.39E-04
51GO:0010272: response to silver ion8.99E-04
52GO:2000034: regulation of seed maturation8.99E-04
53GO:0009072: aromatic amino acid family metabolic process8.99E-04
54GO:0060968: regulation of gene silencing8.99E-04
55GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening8.99E-04
56GO:0032784: regulation of DNA-templated transcription, elongation8.99E-04
57GO:0010359: regulation of anion channel activity8.99E-04
58GO:0061158: 3'-UTR-mediated mRNA destabilization8.99E-04
59GO:0009225: nucleotide-sugar metabolic process9.03E-04
60GO:0006468: protein phosphorylation9.45E-04
61GO:0000187: activation of MAPK activity1.28E-03
62GO:0010116: positive regulation of abscisic acid biosynthetic process1.28E-03
63GO:0048194: Golgi vesicle budding1.28E-03
64GO:0034219: carbohydrate transmembrane transport1.28E-03
65GO:2001289: lipid X metabolic process1.28E-03
66GO:0009052: pentose-phosphate shunt, non-oxidative branch1.28E-03
67GO:0046902: regulation of mitochondrial membrane permeability1.28E-03
68GO:0072334: UDP-galactose transmembrane transport1.28E-03
69GO:0009399: nitrogen fixation1.28E-03
70GO:0006986: response to unfolded protein1.28E-03
71GO:0001676: long-chain fatty acid metabolic process1.28E-03
72GO:0006012: galactose metabolic process1.59E-03
73GO:0006542: glutamine biosynthetic process1.71E-03
74GO:0045227: capsule polysaccharide biosynthetic process1.71E-03
75GO:0033320: UDP-D-xylose biosynthetic process1.71E-03
76GO:0033358: UDP-L-arabinose biosynthetic process1.71E-03
77GO:2000038: regulation of stomatal complex development1.71E-03
78GO:0080142: regulation of salicylic acid biosynthetic process1.71E-03
79GO:0016310: phosphorylation2.18E-03
80GO:0007029: endoplasmic reticulum organization2.19E-03
81GO:0010225: response to UV-C2.19E-03
82GO:0009697: salicylic acid biosynthetic process2.19E-03
83GO:0006090: pyruvate metabolic process2.19E-03
84GO:0006623: protein targeting to vacuole2.51E-03
85GO:0019252: starch biosynthetic process2.51E-03
86GO:0048827: phyllome development2.70E-03
87GO:0048232: male gamete generation2.70E-03
88GO:0042732: D-xylose metabolic process2.70E-03
89GO:1902456: regulation of stomatal opening2.70E-03
90GO:1900425: negative regulation of defense response to bacterium2.70E-03
91GO:0002238: response to molecule of fungal origin2.70E-03
92GO:0035435: phosphate ion transmembrane transport2.70E-03
93GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.70E-03
94GO:0010200: response to chitin2.77E-03
95GO:0007264: small GTPase mediated signal transduction2.86E-03
96GO:2000037: regulation of stomatal complex patterning3.24E-03
97GO:0048280: vesicle fusion with Golgi apparatus3.24E-03
98GO:0098655: cation transmembrane transport3.24E-03
99GO:0048528: post-embryonic root development3.82E-03
100GO:1902074: response to salt3.82E-03
101GO:0055114: oxidation-reduction process3.85E-03
102GO:0009816: defense response to bacterium, incompatible interaction4.09E-03
103GO:0006644: phospholipid metabolic process4.44E-03
104GO:0043068: positive regulation of programmed cell death4.44E-03
105GO:0010078: maintenance of root meristem identity4.44E-03
106GO:1900150: regulation of defense response to fungus4.44E-03
107GO:2000070: regulation of response to water deprivation4.44E-03
108GO:0009408: response to heat4.76E-03
109GO:0006526: arginine biosynthetic process5.08E-03
110GO:0010311: lateral root formation5.30E-03
111GO:0006499: N-terminal protein myristoylation5.56E-03
112GO:0007338: single fertilization5.75E-03
113GO:0051865: protein autoubiquitination5.75E-03
114GO:0009051: pentose-phosphate shunt, oxidative branch5.75E-03
115GO:0010112: regulation of systemic acquired resistance5.75E-03
116GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.12E-03
117GO:0009617: response to bacterium6.64E-03
118GO:0048829: root cap development7.20E-03
119GO:0010629: negative regulation of gene expression7.20E-03
120GO:0006896: Golgi to vacuole transport7.20E-03
121GO:0006032: chitin catabolic process7.20E-03
122GO:0006839: mitochondrial transport7.28E-03
123GO:0006631: fatty acid metabolic process7.59E-03
124GO:0030148: sphingolipid biosynthetic process7.96E-03
125GO:0010015: root morphogenesis7.96E-03
126GO:0000038: very long-chain fatty acid metabolic process7.96E-03
127GO:0000272: polysaccharide catabolic process7.96E-03
128GO:0015770: sucrose transport7.96E-03
129GO:0051707: response to other organism8.24E-03
130GO:0071365: cellular response to auxin stimulus8.75E-03
131GO:0012501: programmed cell death8.75E-03
132GO:0010229: inflorescence development9.57E-03
133GO:0006108: malate metabolic process9.57E-03
134GO:0002237: response to molecule of bacterial origin1.04E-02
135GO:0009933: meristem structural organization1.04E-02
136GO:0009809: lignin biosynthetic process1.11E-02
137GO:0005985: sucrose metabolic process1.13E-02
138GO:0090351: seedling development1.13E-02
139GO:0010030: positive regulation of seed germination1.13E-02
140GO:0034976: response to endoplasmic reticulum stress1.22E-02
141GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.27E-02
142GO:2000377: regulation of reactive oxygen species metabolic process1.31E-02
143GO:0006096: glycolytic process1.32E-02
144GO:0046777: protein autophosphorylation1.32E-02
145GO:0048367: shoot system development1.36E-02
146GO:0006874: cellular calcium ion homeostasis1.41E-02
147GO:0009620: response to fungus1.45E-02
148GO:0015992: proton transport1.50E-02
149GO:0051260: protein homooligomerization1.50E-02
150GO:0016998: cell wall macromolecule catabolic process1.50E-02
151GO:0080092: regulation of pollen tube growth1.60E-02
152GO:0071456: cellular response to hypoxia1.60E-02
153GO:0009814: defense response, incompatible interaction1.60E-02
154GO:0016226: iron-sulfur cluster assembly1.60E-02
155GO:0030433: ubiquitin-dependent ERAD pathway1.60E-02
156GO:0007005: mitochondrion organization1.60E-02
157GO:0009742: brassinosteroid mediated signaling pathway1.68E-02
158GO:0010227: floral organ abscission1.71E-02
159GO:0042147: retrograde transport, endosome to Golgi1.92E-02
160GO:0009751: response to salicylic acid1.96E-02
161GO:0010087: phloem or xylem histogenesis2.02E-02
162GO:0009058: biosynthetic process2.10E-02
163GO:0046323: glucose import2.14E-02
164GO:0045489: pectin biosynthetic process2.14E-02
165GO:0009753: response to jasmonic acid2.18E-02
166GO:0042752: regulation of circadian rhythm2.25E-02
167GO:0048544: recognition of pollen2.25E-02
168GO:0010183: pollen tube guidance2.36E-02
169GO:0000302: response to reactive oxygen species2.48E-02
170GO:0006891: intra-Golgi vesicle-mediated transport2.48E-02
171GO:0010193: response to ozone2.48E-02
172GO:0006633: fatty acid biosynthetic process2.50E-02
173GO:0009630: gravitropism2.60E-02
174GO:0016032: viral process2.60E-02
175GO:0040008: regulation of growth2.63E-02
176GO:0030163: protein catabolic process2.72E-02
177GO:0009567: double fertilization forming a zygote and endosperm2.85E-02
178GO:0051607: defense response to virus3.10E-02
179GO:0007166: cell surface receptor signaling pathway3.14E-02
180GO:0009651: response to salt stress3.17E-02
181GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.36E-02
182GO:0010029: regulation of seed germination3.36E-02
183GO:0009627: systemic acquired resistance3.49E-02
184GO:0042128: nitrate assimilation3.49E-02
185GO:0006974: cellular response to DNA damage stimulus3.49E-02
186GO:0006888: ER to Golgi vesicle-mediated transport3.62E-02
187GO:0006950: response to stress3.62E-02
188GO:0009737: response to abscisic acid3.70E-02
189GO:0030244: cellulose biosynthetic process3.90E-02
190GO:0009738: abscisic acid-activated signaling pathway3.91E-02
191GO:0048767: root hair elongation4.04E-02
192GO:0009832: plant-type cell wall biogenesis4.04E-02
193GO:0009407: toxin catabolic process4.18E-02
194GO:0010119: regulation of stomatal movement4.32E-02
195GO:0006970: response to osmotic stress4.56E-02
196GO:0009867: jasmonic acid mediated signaling pathway4.61E-02
197GO:0045087: innate immune response4.61E-02
198GO:0016051: carbohydrate biosynthetic process4.61E-02
199GO:0006099: tricarboxylic acid cycle4.76E-02
200GO:0009723: response to ethylene4.89E-02
201GO:0048366: leaf development4.98E-02
RankGO TermAdjusted P value
1GO:0016504: peptidase activator activity0.00E+00
2GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
3GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
4GO:0016034: maleylacetoacetate isomerase activity0.00E+00
5GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
6GO:0015576: sorbitol transmembrane transporter activity0.00E+00
7GO:0070577: lysine-acetylated histone binding0.00E+00
8GO:0015591: D-ribose transmembrane transporter activity0.00E+00
9GO:0015148: D-xylose transmembrane transporter activity0.00E+00
10GO:0015575: mannitol transmembrane transporter activity0.00E+00
11GO:0008777: acetylornithine deacetylase activity0.00E+00
12GO:0005524: ATP binding3.11E-06
13GO:0016301: kinase activity4.41E-06
14GO:0004674: protein serine/threonine kinase activity6.16E-05
15GO:0102391: decanoate--CoA ligase activity1.39E-04
16GO:0004747: ribokinase activity1.39E-04
17GO:0003978: UDP-glucose 4-epimerase activity1.39E-04
18GO:0004467: long-chain fatty acid-CoA ligase activity1.82E-04
19GO:0008865: fructokinase activity2.32E-04
20GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity2.51E-04
21GO:0015208: guanine transmembrane transporter activity2.51E-04
22GO:0015294: solute:cation symporter activity2.51E-04
23GO:0015207: adenine transmembrane transporter activity2.51E-04
24GO:0015168: glycerol transmembrane transporter activity2.51E-04
25GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.51E-04
26GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.51E-04
27GO:0008142: oxysterol binding2.86E-04
28GO:0071949: FAD binding3.46E-04
29GO:0030955: potassium ion binding4.10E-04
30GO:0016844: strictosidine synthase activity4.10E-04
31GO:0004743: pyruvate kinase activity4.10E-04
32GO:0045140: inositol phosphoceramide synthase activity5.53E-04
33GO:0004061: arylformamidase activity5.53E-04
34GO:0032934: sterol binding5.53E-04
35GO:0015036: disulfide oxidoreductase activity5.53E-04
36GO:0016595: glutamate binding8.99E-04
37GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity8.99E-04
38GO:0052692: raffinose alpha-galactosidase activity8.99E-04
39GO:0005093: Rab GDP-dissociation inhibitor activity8.99E-04
40GO:0008430: selenium binding8.99E-04
41GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.99E-04
42GO:0004557: alpha-galactosidase activity8.99E-04
43GO:0004751: ribose-5-phosphate isomerase activity8.99E-04
44GO:0050833: pyruvate transmembrane transporter activity8.99E-04
45GO:0016805: dipeptidase activity8.99E-04
46GO:0005354: galactose transmembrane transporter activity1.28E-03
47GO:0001653: peptide receptor activity1.28E-03
48GO:0050373: UDP-arabinose 4-epimerase activity1.71E-03
49GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.71E-03
50GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.71E-03
51GO:0070628: proteasome binding1.71E-03
52GO:0004470: malic enzyme activity1.71E-03
53GO:0015210: uracil transmembrane transporter activity1.71E-03
54GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.71E-03
55GO:0005471: ATP:ADP antiporter activity2.19E-03
56GO:0004356: glutamate-ammonia ligase activity2.19E-03
57GO:0005459: UDP-galactose transmembrane transporter activity2.19E-03
58GO:0015145: monosaccharide transmembrane transporter activity2.19E-03
59GO:0008948: oxaloacetate decarboxylase activity2.19E-03
60GO:0005496: steroid binding2.19E-03
61GO:0010181: FMN binding2.34E-03
62GO:0048040: UDP-glucuronate decarboxylase activity2.70E-03
63GO:0031593: polyubiquitin binding2.70E-03
64GO:0004556: alpha-amylase activity2.70E-03
65GO:0035252: UDP-xylosyltransferase activity2.70E-03
66GO:0036402: proteasome-activating ATPase activity2.70E-03
67GO:0070403: NAD+ binding3.24E-03
68GO:0004012: phospholipid-translocating ATPase activity3.24E-03
69GO:0008506: sucrose:proton symporter activity3.82E-03
70GO:0008235: metalloexopeptidase activity3.82E-03
71GO:0004620: phospholipase activity3.82E-03
72GO:0052747: sinapyl alcohol dehydrogenase activity4.44E-03
73GO:0004708: MAP kinase kinase activity4.44E-03
74GO:0047617: acyl-CoA hydrolase activity6.46E-03
75GO:0004568: chitinase activity7.20E-03
76GO:0008171: O-methyltransferase activity7.20E-03
77GO:0004713: protein tyrosine kinase activity7.20E-03
78GO:0004364: glutathione transferase activity7.91E-03
79GO:0004177: aminopeptidase activity7.96E-03
80GO:0004521: endoribonuclease activity8.75E-03
81GO:0045551: cinnamyl-alcohol dehydrogenase activity8.75E-03
82GO:0000287: magnesium ion binding9.03E-03
83GO:0016887: ATPase activity9.26E-03
84GO:0019888: protein phosphatase regulator activity9.57E-03
85GO:0000175: 3'-5'-exoribonuclease activity9.57E-03
86GO:0004022: alcohol dehydrogenase (NAD) activity9.57E-03
87GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.57E-03
88GO:0005315: inorganic phosphate transmembrane transporter activity9.57E-03
89GO:0004535: poly(A)-specific ribonuclease activity1.04E-02
90GO:0004190: aspartic-type endopeptidase activity1.13E-02
91GO:0017025: TBP-class protein binding1.13E-02
92GO:0008061: chitin binding1.13E-02
93GO:0004970: ionotropic glutamate receptor activity1.13E-02
94GO:0005217: intracellular ligand-gated ion channel activity1.13E-02
95GO:0004725: protein tyrosine phosphatase activity1.22E-02
96GO:0004497: monooxygenase activity1.22E-02
97GO:0051536: iron-sulfur cluster binding1.31E-02
98GO:0003954: NADH dehydrogenase activity1.31E-02
99GO:0043424: protein histidine kinase binding1.41E-02
100GO:0008408: 3'-5' exonuclease activity1.50E-02
101GO:0004540: ribonuclease activity1.50E-02
102GO:0016491: oxidoreductase activity1.65E-02
103GO:0003727: single-stranded RNA binding1.81E-02
104GO:0047134: protein-disulfide reductase activity1.92E-02
105GO:0004791: thioredoxin-disulfide reductase activity2.25E-02
106GO:0005355: glucose transmembrane transporter activity2.25E-02
107GO:0004872: receptor activity2.36E-02
108GO:0015144: carbohydrate transmembrane transporter activity2.38E-02
109GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.56E-02
110GO:0005351: sugar:proton symporter activity2.69E-02
111GO:0005509: calcium ion binding2.89E-02
112GO:0043565: sequence-specific DNA binding2.96E-02
113GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.97E-02
114GO:0008237: metallopeptidase activity2.97E-02
115GO:0051213: dioxygenase activity3.23E-02
116GO:0009931: calcium-dependent protein serine/threonine kinase activity3.49E-02
117GO:0004683: calmodulin-dependent protein kinase activity3.62E-02
118GO:0003824: catalytic activity3.72E-02
119GO:0005096: GTPase activator activity4.04E-02
120GO:0030145: manganese ion binding4.32E-02
121GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.61E-02
122GO:0000149: SNARE binding4.90E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol1.14E-06
2GO:0005886: plasma membrane2.18E-06
3GO:0016021: integral component of membrane4.34E-05
4GO:0045252: oxoglutarate dehydrogenase complex2.51E-04
5GO:0005783: endoplasmic reticulum2.51E-04
6GO:0030014: CCR4-NOT complex2.51E-04
7GO:0005773: vacuole2.78E-04
8GO:0005778: peroxisomal membrane3.86E-04
9GO:0008540: proteasome regulatory particle, base subcomplex4.10E-04
10GO:0016020: membrane5.43E-04
11GO:0031304: intrinsic component of mitochondrial inner membrane5.53E-04
12GO:0031314: extrinsic component of mitochondrial inner membrane5.53E-04
13GO:0042406: extrinsic component of endoplasmic reticulum membrane8.99E-04
14GO:0031461: cullin-RING ubiquitin ligase complex1.28E-03
15GO:0005741: mitochondrial outer membrane1.34E-03
16GO:0005789: endoplasmic reticulum membrane2.26E-03
17GO:0030140: trans-Golgi network transport vesicle2.70E-03
18GO:0030173: integral component of Golgi membrane3.24E-03
19GO:0031597: cytosolic proteasome complex3.24E-03
20GO:0000794: condensed nuclear chromosome3.82E-03
21GO:0031595: nuclear proteasome complex3.82E-03
22GO:0005777: peroxisome3.82E-03
23GO:0012507: ER to Golgi transport vesicle membrane4.44E-03
24GO:0031305: integral component of mitochondrial inner membrane4.44E-03
25GO:0005794: Golgi apparatus5.74E-03
26GO:0005802: trans-Golgi network6.83E-03
27GO:0017119: Golgi transport complex7.20E-03
28GO:0031902: late endosome membrane7.59E-03
29GO:0048471: perinuclear region of cytoplasm7.96E-03
30GO:0000502: proteasome complex1.11E-02
31GO:0030176: integral component of endoplasmic reticulum membrane1.13E-02
32GO:0005635: nuclear envelope1.19E-02
33GO:0005839: proteasome core complex1.50E-02
34GO:0005743: mitochondrial inner membrane1.82E-02
35GO:0005770: late endosome2.14E-02
36GO:0032580: Golgi cisterna membrane2.85E-02
37GO:0005774: vacuolar membrane3.36E-02
38GO:0048046: apoplast3.68E-02
39GO:0000151: ubiquitin ligase complex3.90E-02
40GO:0005737: cytoplasm4.00E-02
41GO:0000325: plant-type vacuole4.32E-02
42GO:0005819: spindle4.90E-02
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Gene type



Gene DE type